EST details — SGN-E546044
| Search information |
| Request: 546044 | Match: SGN-E546044 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193818 | Clone name: TUS-69-D8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C101213 [cLHT-12-N2] | Trace: SGN-T170099 | EST: SGN-E355913 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193818 [TUS-69-D8] | Trace: SGN-T346920 | EST: SGN-E546045 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546044 | Length: 776 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546044 [] (trimmed)
GACAACAAGGCTTTATTACAAAAGTAGCCAATATAGTGTAGATTAAGTTTTAAAAAATAGCCATTTTTGTTTTGGCCATTACATCCTCAACAAAC
AAATCAAAGTTTTTCTCTGAACTTCCATTGGCTAATAATGCAATTTCCATAGTTTTCTTCACTTCCTTTATAACCTTCCTCAAATCTTTTGAATT
TTCTTCACTCATAAGAAAATTAATCTTTTTTGCTATTTCCTCCTTTGGAATAATTAATTTATTATTAATATCATAATTATCACAAAGATTAATCC
CAACTTTCCAATCATCAACCACCAACTTTCTATTAGTTTGTTGATCAACACTTATAGGATGACATATCATTGGTACACTTGCCCATAAGCTCTCC
AGAATTGAGTTCCATCCACAGTGCGTCAAAAACCTTCCGATCGCCGGGTGCGACAGTACGGCTCGTTGATCGCACCACGGTACAATCAACCCTCG
ATCTATATTTTCTCGAAATCCAGCTGGGAAATAATTATCCGTTTCGTTCGTAACCGCCAAATTAGGTCTAAGTACCCAAATAAAATATTCCACTT
TGCTAAGCAATATTCCTTGAGCAAATTCTATAACATTTTCTTTGCTTGGACTACACAAGCTACCAAGTGAAAAATATAATACTGAGGATTTAGGT
TTAGTGTTTAGCCATTCCAAACAATTTGACTCTGGCAAAAAACTATTGGAAAAATTGACATTTTTTGATGAGTTGAATTGATGATCATGAGAAAT
TGGACCAATAGCAAAA
AAATCAAAGTTTTTCTCTGAACTTCCATTGGCTAATAATGCAATTTCCATAGTTTTCTTCACTTCCTTTATAACCTTCCTCAAATCTTTTGAATT
TTCTTCACTCATAAGAAAATTAATCTTTTTTGCTATTTCCTCCTTTGGAATAATTAATTTATTATTAATATCATAATTATCACAAAGATTAATCC
CAACTTTCCAATCATCAACCACCAACTTTCTATTAGTTTGTTGATCAACACTTATAGGATGACATATCATTGGTACACTTGCCCATAAGCTCTCC
AGAATTGAGTTCCATCCACAGTGCGTCAAAAACCTTCCGATCGCCGGGTGCGACAGTACGGCTCGTTGATCGCACCACGGTACAATCAACCCTCG
ATCTATATTTTCTCGAAATCCAGCTGGGAAATAATTATCCGTTTCGTTCGTAACCGCCAAATTAGGTCTAAGTACCCAAATAAAATATTCCACTT
TGCTAAGCAATATTCCTTGAGCAAATTCTATAACATTTTCTTTGCTTGGACTACACAAGCTACCAAGTGAAAAATATAATACTGAGGATTTAGGT
TTAGTGTTTAGCCATTCCAAACAATTTGACTCTGGCAAAAAACTATTGGAAAAATTGACATTTTTTGATGAGTTGAATTGATGATCATGAGAAAT
TGGACCAATAGCAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546044] | SGN-U600114 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346919 [Download][View] | Facility Assigned ID: TUS69D08_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.933 | Expected Error Rate: 0.0069 | Quality Trim Threshold: 20.5 |
Working
