EST details — SGN-E546218
| Search information |
| Request: 546218 | Match: SGN-E546218 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193919 | Clone name: TUS-69-H13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C101846 [cLHT-22-E1] | Trace: SGN-T170999 | EST: SGN-E358514 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193919 [TUS-69-H13] | Trace: SGN-T350210 | EST: SGN-E549335 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546218 | Length: 812 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546218 [] (trimmed)
AGCATAGCAAGTTTTAGATTTTTTATATTTGGGAATAGAGAGGATATACCATTCTTGTCACTTAAGTGGTTTCTGTATTTCTTTAATTTTTGACA
CACTGCTTTAGAATTCATTGCCAATCTTAACTGCTTTTATAAGTTAACTCCCTTTCTCATCACATTCATCCTTTTTTCCTTCCCCTTTGTTGTCG
ACCACAAAAATAACAAAACTGAAAAGATCTGGTCTCCAGAGAGAAGTCGTGAGATTGTTTCGTGTATAAACTCGAAGGTAGATAAAGGTAACCCT
CCTACAGCAACAAACATACTAGCGGCCGAAGGAACTATCCACATCGTGCATCTTCACTCTGGCAAAAAAATGTCCTAAATTGCGACCCATGCTAT
GTAACCAGCTCAACTTTGCTTTGTGATGAGCTCAATGTCCGCTCCAACTTCAGCAATCTTTGCGTCTTTAGATGCCTTTGCCGCTTTTGCAATAT
TTGCAACGTCAAAGTCCATTGCAATTCTTTTAACAACACCTTCAAGCATCAGTGATCCTATGGCAACTAAAGCCCGAAATTTTGCATCAGCTTCA
ACACTTTCCTCTTCAGCAATCGTAAAAACCTCAAGTGCAGCTGAAAGTACTTGAGACTGTCCCTCTTCATCCTTCTTTTCAACCAAGAGAACAGC
ATAGTTGAGTATCAGTGTTGAATAAGCCAACTGAACATTTTTATTGGAAGATAAGTAACAAGTGGAATATGCATCCAGAACCTCCCCACGATGCT
TTAACAGCCAATCATGGTAGGATGCATTCTTAAAGAAAGTGGTCAAAGCACG
CACTGCTTTAGAATTCATTGCCAATCTTAACTGCTTTTATAAGTTAACTCCCTTTCTCATCACATTCATCCTTTTTTCCTTCCCCTTTGTTGTCG
ACCACAAAAATAACAAAACTGAAAAGATCTGGTCTCCAGAGAGAAGTCGTGAGATTGTTTCGTGTATAAACTCGAAGGTAGATAAAGGTAACCCT
CCTACAGCAACAAACATACTAGCGGCCGAAGGAACTATCCACATCGTGCATCTTCACTCTGGCAAAAAAATGTCCTAAATTGCGACCCATGCTAT
GTAACCAGCTCAACTTTGCTTTGTGATGAGCTCAATGTCCGCTCCAACTTCAGCAATCTTTGCGTCTTTAGATGCCTTTGCCGCTTTTGCAATAT
TTGCAACGTCAAAGTCCATTGCAATTCTTTTAACAACACCTTCAAGCATCAGTGATCCTATGGCAACTAAAGCCCGAAATTTTGCATCAGCTTCA
ACACTTTCCTCTTCAGCAATCGTAAAAACCTCAAGTGCAGCTGAAAGTACTTGAGACTGTCCCTCTTCATCCTTCTTTTCAACCAAGAGAACAGC
ATAGTTGAGTATCAGTGTTGAATAAGCCAACTGAACATTTTTATTGGAAGATAAGTAACAAGTGGAATATGCATCCAGAACCTCCCCACGATGCT
TTAACAGCCAATCATGGTAGGATGCATTCTTAAAGAAAGTGGTCAAAGCACG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546218] | SGN-U573867 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347093 [Download][View] | Facility Assigned ID: TUS69H13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0015 | Quality Trim Threshold: 20.5 |
Working
