EST details — SGN-E546666
| Search information |
| Request: 546666 | Match: SGN-E546666 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194180 | Clone name: TUS-70-C10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102989 [cLHT-35-A12] | Trace: SGN-T172027 | EST: SGN-E358381 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194180 [TUS-70-C10] | Trace: SGN-T347542 | EST: SGN-E546667 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546666 | Length: 243 bp (863 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546666 [] (trimmed)
GTCGAGTTTTTTTTCTACTATATATATGGAGTCAATTGAAGAACTGACTCTTTTCTGCATTTTGTATTACCAAATTCATCATTATGATAGTTGCT
ACAAGCAATTTGGCAATACAGCTAGCAATAAACAAAAGAAACTGTTTCCTAGTTAAAACAACACTGCGGAAACATAGGGGCTTGCGGCAACATGC
TTTTTATTATCCTCGCGAAACAGAGTGCTAGTTGAAATTTGGCAACGCTGAAC
ACAAGCAATTTGGCAATACAGCTAGCAATAAACAAAAGAAACTGTTTCCTAGTTAAAACAACACTGCGGAAACATAGGGGCTTGCGGCAACATGC
TTTTTATTATCCTCGCGAAACAGAGTGCTAGTTGAAATTTGGCAACGCTGAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546666] | SGN-U588625 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347541 [Download][View] | Facility Assigned ID: TUS70C10_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.937 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 20.5 |
Working
