EST details — SGN-E547931
| Search information |
| Request: 547931 | Match: SGN-E547931 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188902 | Clone name: TUS-56-G12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C48947 [cLEI-6-H15] | Trace: SGN-T80766 | EST: SGN-E265980 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188902 [TUS-56-G12] | Trace: SGN-T338554 | EST: SGN-E537679 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547931 | Length: 731 bp (920 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547931 [] (trimmed)
GGAACAAAACGCTGCAATCACATTAGAAACGCCGCTAAAAATAAGTATTAGTGGCAACATAAACCGCCACTAACTCAAAAAAGAGTAACCGCTAA
AAGTAAGTGTTATTGACAACAAAAACTGCCACTAATTAATTCGATTTGATCTGAATTACCCTGACCAAAACCAAAAACTGTTTTTAAGTAAATCA
AAGGTAAACATGAGTAGCAAGGAGTTCAACTACAGTCTATACCATAGAAAGTGCAATGCATGTAAATGTTTTGTTTTTAATCTTCTGGCAAAAAA
AAAAAGAGCAGTAGTCTTAGTCATTTCTCCTCCTGTTGCTTGTGGGAGCGGGGGGTTGCTCTGAGAGGATTTTCAAAACATTCACCAGTGCCCGT
AAACGATCCCAGATGTTCAAACCATAAAGAGTGTGAACCAGAGACTCTTGGAACTCGAATCCATTCTCGGCAATAGGATACTGAATAGGCTTTGG
TATCTTGGTTTTTATAAAAGGCCACCACCGGTCCTCCACAACTGACTTTACGAGACAGCAAGCTCGTAATCCTTCAATACCAGCAAATCTTCCAA
ATCCACTGTCTTTGACTCCACCAAAATGGTAGTGACTGACACATGTAATTTGATGCGAAGTCATTGACAGCAGCCACTCCACAATGTAATTGTGA
AGCTATCTGCCTAGCACGACGCTGACTGCCTGAAAATACAGCACAACCAGGCCCATAGCTTGAATC
AAGTAAGTGTTATTGACAACAAAAACTGCCACTAATTAATTCGATTTGATCTGAATTACCCTGACCAAAACCAAAAACTGTTTTTAAGTAAATCA
AAGGTAAACATGAGTAGCAAGGAGTTCAACTACAGTCTATACCATAGAAAGTGCAATGCATGTAAATGTTTTGTTTTTAATCTTCTGGCAAAAAA
AAAAAGAGCAGTAGTCTTAGTCATTTCTCCTCCTGTTGCTTGTGGGAGCGGGGGGTTGCTCTGAGAGGATTTTCAAAACATTCACCAGTGCCCGT
AAACGATCCCAGATGTTCAAACCATAAAGAGTGTGAACCAGAGACTCTTGGAACTCGAATCCATTCTCGGCAATAGGATACTGAATAGGCTTTGG
TATCTTGGTTTTTATAAAAGGCCACCACCGGTCCTCCACAACTGACTTTACGAGACAGCAAGCTCGTAATCCTTCAATACCAGCAAATCTTCCAA
ATCCACTGTCTTTGACTCCACCAAAATGGTAGTGACTGACACATGTAATTTGATGCGAAGTCATTGACAGCAGCCACTCCACAATGTAATTGTGA
AGCTATCTGCCTAGCACGACGCTGACTGCCTGAAAATACAGCACAACCAGGCCCATAGCTTGAATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547931] | SGN-U576701 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348806 [Download][View] | Facility Assigned ID: TUS56G12_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0021 | Quality Trim Threshold: 14.5 |
Working
