EST details — SGN-E548533
| Search information |
| Request: 548533 | Match: SGN-E548533 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191082 | Clone name: TUS-62-B8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83900 [cLET-26-J16] | Trace: SGN-T108913 | EST: SGN-E296861 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191082 [TUS-62-B8] | Trace: SGN-T342216 | EST: SGN-E541341 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548533 | Length: 629 bp (873 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548533 [] (trimmed)
CCAAATAATAAAGCAAAACCAAGTTTTTTTTGCGCTTCTTATGGAAGAGTCCTCTTAAAATTTTGAAAATAACACAATAAATTATCCCCATAATT
TTCTTGGCTTTCTTGGTCACAAAAAAAACTTTTCATCTGTTTAACTTTTTCTCCAGAAATTTCACCCTCTTTTTCAATGAGTACCAAATTTAGGG
ACTTAGCTCCTGAGCCACGAGTGAATGACCCGTCCCAATCTCCTCTTGGAATTAAATACACTATCTTTTTCTCCCCCAAAAACCTAACATTTATC
CCTTGATCAGCTCAAAAATGTTAAAAAAACTAATGGCTTCTCATATTGTATTGCCTCGACTACTGAACTCCATCCTGAATGTGTAAAAAATCCAC
CAACGGAGACATGACTCAATATCTTGGGTTGGGGGGCCCAACTCGTGCACAATATTCCTCTTCCCTTTTTTCAATCTTCGAATCCTTCTGGAAAT
TGAACCAACCCATCTTCCGATTCTCCTCTTTTAGTTCTTAAAACCCAAAGAAATGATAACCCAAAAAGCTCTAATCCAAGTGAGAACCCCATGAG
CCCCTTTTGACTCGATTTTGCCCCTCCACCAAAGGCAACATAAATCACTTTCCCCTTTT
TTCTTGGCTTTCTTGGTCACAAAAAAAACTTTTCATCTGTTTAACTTTTTCTCCAGAAATTTCACCCTCTTTTTCAATGAGTACCAAATTTAGGG
ACTTAGCTCCTGAGCCACGAGTGAATGACCCGTCCCAATCTCCTCTTGGAATTAAATACACTATCTTTTTCTCCCCCAAAAACCTAACATTTATC
CCTTGATCAGCTCAAAAATGTTAAAAAAACTAATGGCTTCTCATATTGTATTGCCTCGACTACTGAACTCCATCCTGAATGTGTAAAAAATCCAC
CAACGGAGACATGACTCAATATCTTGGGTTGGGGGGCCCAACTCGTGCACAATATTCCTCTTCCCTTTTTTCAATCTTCGAATCCTTCTGGAAAT
TGAACCAACCCATCTTCCGATTCTCCTCTTTTAGTTCTTAAAACCCAAAGAAATGATAACCCAAAAAGCTCTAATCCAAGTGAGAACCCCATGAG
CCCCTTTTGACTCGATTTTGCCCCTCCACCAAAGGCAACATAAATCACTTTCCCCTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548533] | SGN-U588905 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349408 [Download][View] | Facility Assigned ID: TUS62B08_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.916 | Expected Error Rate: 0.0270 | Quality Trim Threshold: 14.5 |
Working
