EST details — SGN-E548681
| Search information |
| Request: 548681 | Match: SGN-E548681 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191607 | Clone name: TUS-63-H5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C89342 [cLEW-13-P7] | Trace: SGN-T113159 | EST: SGN-E297462 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191607 [TUS-63-H5] | Trace: SGN-T343118 | EST: SGN-E542243 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548681 | Length: 778 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548681 [] (trimmed)
CAAAAGAAAAAGAGTCGCATAAAACGGATATTCGAGTTTAGAAACAGCACCAAAGATAGATCCATATTACAGCATTCATCTACTTAAGACATAAA
GAGTTCAGAATCATGAAGACACATAGCAGTTTGGATCATGGTGAGTAGGGAGCACAACCAGGGCTCCTGCTACGGCTCCTACTAGGGCTCCTGCT
GTGACCCCTAACTGGAGAACGCTCCCTCCTAACTGGACTTCTGCTACGGCTCCTTGGACTGCCATTGTATGGTGGGTGCTCTCTGACTGGAGTTT
GACTTCGACTCCTTGATCCATTATGTGGTGGAGGAGACAGGTCCCGAGGAGGGGATCGTGAATATGACCTCTCACGACTGTATCTTTTCTCTTCA
GGTGAGACAGACCTGAAATGTAGAAGTGGGATAGAGATAAACAGACAAATACATTGTATAACTTATTGTTGTCCCAAAGGATGTGAAAAAAGAGC
TAAAACAATAGCTAAGAGGGTACACAAGGCAAGCAAATTTGTAAAATGTCTGATCAACGTCCAAGGACCAACTTGCAGGCAGTAAAACAAGTTCA
AAATATGATTTTAACTAACAATGGATATAGTATTCATAAAAACAAACAGCATGCTTTATCAGCTATATGAATCAGACGATGCACGCAAAACAAAA
AAAATGAACTTAATACCAAAGACAAGTGTATGATATGCCTGGTTGATTGTTGGAAGCACATATTTATACCAAAGATAGTGTATGATATGCCTGGT
TGAATGTTGGAAGCACAT
GAGTTCAGAATCATGAAGACACATAGCAGTTTGGATCATGGTGAGTAGGGAGCACAACCAGGGCTCCTGCTACGGCTCCTACTAGGGCTCCTGCT
GTGACCCCTAACTGGAGAACGCTCCCTCCTAACTGGACTTCTGCTACGGCTCCTTGGACTGCCATTGTATGGTGGGTGCTCTCTGACTGGAGTTT
GACTTCGACTCCTTGATCCATTATGTGGTGGAGGAGACAGGTCCCGAGGAGGGGATCGTGAATATGACCTCTCACGACTGTATCTTTTCTCTTCA
GGTGAGACAGACCTGAAATGTAGAAGTGGGATAGAGATAAACAGACAAATACATTGTATAACTTATTGTTGTCCCAAAGGATGTGAAAAAAGAGC
TAAAACAATAGCTAAGAGGGTACACAAGGCAAGCAAATTTGTAAAATGTCTGATCAACGTCCAAGGACCAACTTGCAGGCAGTAAAACAAGTTCA
AAATATGATTTTAACTAACAATGGATATAGTATTCATAAAAACAAACAGCATGCTTTATCAGCTATATGAATCAGACGATGCACGCAAAACAAAA
AAAATGAACTTAATACCAAAGACAAGTGTATGATATGCCTGGTTGATTGTTGGAAGCACATATTTATACCAAAGATAGTGTATGATATGCCTGGT
TGAATGTTGGAAGCACAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548681] | SGN-U597060 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349556 [Download][View] | Facility Assigned ID: TUS63H05_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0016 | Quality Trim Threshold: 14.5 |
Working
