EST details — SGN-E549205
| Search information |
| Request: 549205 | Match: SGN-E549205 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193458 | Clone name: TUS-68-E8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C98840 [cLEZ-13-M9] | Trace: SGN-T122754 | EST: SGN-E308691 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193458 [TUS-68-E8] | Trace: SGN-T346301 | EST: SGN-E545426 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549205 | Length: 738 bp (869 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E549205 [] (trimmed)
GATGGCCTTTTCTTTAGCATTTCCAGCCTTAACACTATTTCTTATATATATTGCTTACAATCTCTATCGTCGATTGAAAGCCAAGCTACCTCCCG
GTCCGCGGCCGTGGCCTATCATCGGAAACCTCTACGATATAGAGCCGATAAGGTTCCGATGCTTCGCCGCGTGGTCGGAAATATATGGCCCTATT
TTCTCATTTTACCTAGGTTCACAACTAAATGTTGTGATAAATAATGCCACATTAGCTAAGGAAGTATTGAAAGACAATGACCAAAATTTGGCTGA
TAGGTTTAGGACTAAACCATTGGCAAATGTGAGTAGAAATGGGAGTGATTTAATTTGGGCTGATTATGGACATCATTATGTCAAAGTGAGAAAAT
TATGTAATCTTGAACTTTTTACTTCAAAGAGAATTGAAGCTCTTAGACCAATTAGAGAAGATGAAGTCACTTCCATGATCCATGACATCTTTAGG
GATTCTACAAAGCAAGGTAAAAGCTTGATAATGAGGAGCTACTTGGGATTAGTAGCATTCAACAACATAACAAGACTAACATTTGGTAAAAGGTT
TATGGACTCACAAGGTAATGTTGATGAACAAGGTAAAGAACTCAAAGAGATAGTCTCAAATGGAATGAAAATTGGAGGAAAACTTAACCTAGGTG
ACTTTGTTCCATGGCTAAGTTGTTTCTTNCAGGATGATAATGAAGCTCTTAAGGCACAAGATAGTCATGTTGA
GTCCGCGGCCGTGGCCTATCATCGGAAACCTCTACGATATAGAGCCGATAAGGTTCCGATGCTTCGCCGCGTGGTCGGAAATATATGGCCCTATT
TTCTCATTTTACCTAGGTTCACAACTAAATGTTGTGATAAATAATGCCACATTAGCTAAGGAAGTATTGAAAGACAATGACCAAAATTTGGCTGA
TAGGTTTAGGACTAAACCATTGGCAAATGTGAGTAGAAATGGGAGTGATTTAATTTGGGCTGATTATGGACATCATTATGTCAAAGTGAGAAAAT
TATGTAATCTTGAACTTTTTACTTCAAAGAGAATTGAAGCTCTTAGACCAATTAGAGAAGATGAAGTCACTTCCATGATCCATGACATCTTTAGG
GATTCTACAAAGCAAGGTAAAAGCTTGATAATGAGGAGCTACTTGGGATTAGTAGCATTCAACAACATAACAAGACTAACATTTGGTAAAAGGTT
TATGGACTCACAAGGTAATGTTGATGAACAAGGTAAAGAACTCAAAGAGATAGTCTCAAATGGAATGAAAATTGGAGGAAAACTTAACCTAGGTG
ACTTTGTTCCATGGCTAAGTTGTTTCTTNCAGGATGATAATGAAGCTCTTAAGGCACAAGATAGTCATGTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549205] | SGN-U576401 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350080 [Download][View] | Facility Assigned ID: TUS68E08_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
