EST details — SGN-E549302
| Search information |
| Request: 549302 | Match: SGN-E549302 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193802 | Clone name: TUS-69-C16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C101143 [cLHT-12-G5] | Trace: SGN-T170035 | EST: SGN-E355849 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193802 [TUS-69-C16] | Trace: SGN-T346892 | EST: SGN-E546017 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549302 | Length: 701 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549302 [] (trimmed)
ACTAGAAATAATTCTTAGTCCCATCTTATACAAAACTGAGGGGAGCGAGCAAGAATAACAACAAAAACAAAGTTTTTTTTTTTTGAAAAAAAAAC
TAAAAAAAAGTTTTTACACTACATATCTTTATTGTCCCTTTCCTCCTGGATTTCTTTTCAACAACAACAAAAGACATGTCAACTCTTTGGTGGAT
GAATTTGGTTAGGGTTTTGTAGTGGAAAATGTGGTAATTGCATGGGAATTGGGTAATTAAATTGTGTTATTGAAGTAAAAGGATCTTGTTTTTGG
CCTATTGCTTCCAATGCTTTCACTTGTGACCTCAAAAATTTCAAATAATTTGCTGCTTCATCAAGCATTGATGCTGTATCCATTTTACTTCCTCC
TGGTACTAGCCTTTGCAAAACCCTAATCCTTTCGCTTATCCTTTCTCTCCGTTGCCTCGCCGCCACCGTCTGAGGATCCGTTGATATCTTTACAT
TCTTCCGTTTAGGCTTTTCTAGTACTTCAGCACCGAAATCAACCGGCCTGAATGCTGCAGCTCGGTATATCATTTCTTTCATCTGAGCAATCGCC
TCCGGATCAGGCTCTTGATCAATTGACGATACTGATGAACTAGCTTGTTGGAAATTGATGTTTGATGAACTTGGACGCTTATTAGAGCTCTCAAT
TAACCTCACCTTCTTTGATTTGGATTGTTTTTCTGA
TAAAAAAAAGTTTTTACACTACATATCTTTATTGTCCCTTTCCTCCTGGATTTCTTTTCAACAACAACAAAAGACATGTCAACTCTTTGGTGGAT
GAATTTGGTTAGGGTTTTGTAGTGGAAAATGTGGTAATTGCATGGGAATTGGGTAATTAAATTGTGTTATTGAAGTAAAAGGATCTTGTTTTTGG
CCTATTGCTTCCAATGCTTTCACTTGTGACCTCAAAAATTTCAAATAATTTGCTGCTTCATCAAGCATTGATGCTGTATCCATTTTACTTCCTCC
TGGTACTAGCCTTTGCAAAACCCTAATCCTTTCGCTTATCCTTTCTCTCCGTTGCCTCGCCGCCACCGTCTGAGGATCCGTTGATATCTTTACAT
TCTTCCGTTTAGGCTTTTCTAGTACTTCAGCACCGAAATCAACCGGCCTGAATGCTGCAGCTCGGTATATCATTTCTTTCATCTGAGCAATCGCC
TCCGGATCAGGCTCTTGATCAATTGACGATACTGATGAACTAGCTTGTTGGAAATTGATGTTTGATGAACTTGGACGCTTATTAGAGCTCTCAAT
TAACCTCACCTTCTTTGATTTGGATTGTTTTTCTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549302] | SGN-U564812 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350177 [Download][View] | Facility Assigned ID: TUS69C16_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0009 | Quality Trim Threshold: 20.5 |
Working
