EST details — SGN-E553460

Search information 
Request: 553460Match: SGN-E553460
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332081Clone name: cTSC-1-D1
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E553460Length: 877 bp (1290 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553460 [] (trimmed) GGAAGAGGCTATTCTTCTCTTAATGATATTATTGAGAAAGATTTCTCTACAAAGGATAGAGTGGGACCCTTCGATTCTTGATCATCTCTCGTATG
CATTATCTATCTCAGGGGGTTTAAAGACTTTGGCTAGCAAAGTAGAAGAATTGCTTCCCAGAACTATAGATCGGCAAGAGAAGTATCTAATTTTA
GCTCTCTGTTACTACGGAGGAGGAGATGACTTCACTGCATTGAACTTGTTACGGAAACTGTGGAGAAGTACAGAGGATCACATCTGTGTTCCAGG
TTTGTTATTGGCTTCAAAAGTGTGTGCTGAAAGCCCAGATTGTGCAAGCGAGGGGATAATTTATGCTCACAGAGCTATTGAAAGACTGCAAGAAA
GATGTAGTCATTTGTTGGGTGTTGCCAATTGTGTATTAGGACTCTCACTTACAGCTCATTCTAGAACAGTACTGACAGATTCTGAGAGGGTTAAG
ATACATTCAGATGCACTTAAGTCCTTTGAATCTGCTGGAAAGCTGACAAAGATGAGTGATACTAATGTCATTTACCATCTTTGTCTAGAAAATGC
CGAACAAAGGAAGTTGGATGTCGCCGTCCATTACGCAAACTGGTTTCTTAAACTGGAAGGTGGCTCTACACTGAAAGGATCGATGCTTTTGGCTC
GGGTATTATCAGCTCAGAAACGGTTTCTGGATGCTGAAACTATCATTAATGTTGCCCTAGAGCAGAGTGGAAAGTGGGATCATGGAGAACTGTTG
AGGACCAAAGCTAAGCTCCAAATCGCGCAGGGTCAAGTGAAAAATGCTATAGAAACATATACTCAGATTCTTGCTATTCTTCAAGTTCAGAGAAG
AAGCTTCGGACTGGGGGAAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553460] SGN-U602359 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T355852 [Download][View] Facility Assigned ID: ctsc1d1
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0031 Quality Trim Threshold: 12.5