EST details — SGN-E553470

Search information 
Request: 553470Match: SGN-E553470
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332093Clone name: cTSC-1-D20
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E553470Length: 702 bp (1201 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553470 [] (trimmed) AATGGGCCAAATTTTACTGCTTAGCATTACTAACAAAAACATCCATTCAACAAAGTTTGTAAATTAAGTTGTAGCAAATTAAAAGCAAAGCTGTC
TATCTCTTCCTCAGGAAGTTATTGGTATCAGCTGATCATTTACCACTAATTACATTCTTCATAATTACCAAGCCTTACAAGTTATAGATTAAACT
GAAGCAGACACATGAAGTCTCATTTTGAGACACGCCTCCACACTTTTTTTCCAGGACCACCACGCACATTGCCATATCTTCTGCCACCAAGTGAG
GCTTGAGATGTCCTAAACGAGCGTGGTCTGTTGCCATGATCAATATGGACTATTGGGATCTCTACTCCAAAGGTCTCGTTGTCTATTTTCATTTG
TTGAGAGAGCGTCAGTATGGATTCATGCTCTGGTAGACCATAAGAAAGATAGTCGAAGAATTCGTCCTTATGGTAAACAGGCAGCTTATGGTCAT
CACTGTTGCTGAAGATGGCCCAAACTTCTTTCTTGTTGAACTTTTTGTACATTCCCTCGAAATCAAAGTCCTCTACAAATCTTCTTATCACACGG
GGTTTCTGATCTCTTCCCCCAGCAAACTGATTTTTATCATGAGGAGATGATGTAGATCCCTGCAAGTAGAAGAAGAACGGAAAAAAAATAGAAAG
GGTATTGTTGAGCACAAAAAACAATAATAGGGTTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553470] SGN-U604365 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T355864 [Download][View] Facility Assigned ID: ctsc1d20
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0028 Quality Trim Threshold: 20.5