EST details — SGN-E553649
| Search information |
| Request: 553649 | Match: SGN-E553649 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C332308 | Clone name: cTSC-1-M2 |
| ||
| Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E553649 | Length: 853 bp (1293 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E553649 [] (trimmed)
GATGTCTCTCAAATTCTTCAAACCCCTTTTTGATTCTTTCCCATGGCCCCTTCAACAACTCAATGTTGAGCAACAGGCTATGTTTTTCGTCTGTT
TTCTTGGTTTTTTAGCTTTACTTTGGTTTTTCATCAGTAACTCGAACAAAGGTCTGCCACCAGGGCCTAAAGCTTTGCCCTTGATAGGTAATCTC
CATTCTCTTGATCCTGAACTTCACACCTATTTTGCATCTCTGTCCCAAATTTATGGCCCCATTTGTAGAATCTGGCTTGGTCAAAAACTTGGGAT
TATTATTACTTCACCAGAATTAGCTCGCGACGTTCTAAAGGATAAAGATATTATTTTTGCTAACAGAGACGTGCCTGCTGCTGCAGTAGAAATTT
CATATGGTTGCAATGACATACTTTGGAATTCTTATGGACCACAATGGCGAATGATGAGAAAGCTTTGTGTTCGCGATATGCTTAGTTGTTCTACT
TTAGATTCTGTTTGTGCACTAAGGCGAAGGGAGCTTAGACAATCGATGAATTACTTCTATAGTAAGAAGGGTTTACCAGTGAACGTTGGTGAGCA
GATGTTCTTGACTGTGTTTAATGTGATTACAAGCATGTTATGGGGTAGCACAGTGAAGGGTGAGGAAAGAGCTAATCTTGGGGCAGAGTTTAGGT
ATGTTGTGAGTGAGATGGCTGCGCTGTGCAGTATTCCCAATCTTTCCGATTTCTACCCAGGTTTGGCCTGGTTTGATTTCCAGGGTGTTACAAAG
AAGATGAAGCTGCTGTTAAAGAGATTTGAGAAGATATTTGATAGCATGATTGATGAAAGAAAAAATTTGGATAGAAATGGTGTTGGCCAAGAA
TTCTTGGTTTTTTAGCTTTACTTTGGTTTTTCATCAGTAACTCGAACAAAGGTCTGCCACCAGGGCCTAAAGCTTTGCCCTTGATAGGTAATCTC
CATTCTCTTGATCCTGAACTTCACACCTATTTTGCATCTCTGTCCCAAATTTATGGCCCCATTTGTAGAATCTGGCTTGGTCAAAAACTTGGGAT
TATTATTACTTCACCAGAATTAGCTCGCGACGTTCTAAAGGATAAAGATATTATTTTTGCTAACAGAGACGTGCCTGCTGCTGCAGTAGAAATTT
CATATGGTTGCAATGACATACTTTGGAATTCTTATGGACCACAATGGCGAATGATGAGAAAGCTTTGTGTTCGCGATATGCTTAGTTGTTCTACT
TTAGATTCTGTTTGTGCACTAAGGCGAAGGGAGCTTAGACAATCGATGAATTACTTCTATAGTAAGAAGGGTTTACCAGTGAACGTTGGTGAGCA
GATGTTCTTGACTGTGTTTAATGTGATTACAAGCATGTTATGGGGTAGCACAGTGAAGGGTGAGGAAAGAGCTAATCTTGGGGCAGAGTTTAGGT
ATGTTGTGAGTGAGATGGCTGCGCTGTGCAGTATTCCCAATCTTTCCGATTTCTACCCAGGTTTGGCCTGGTTTGATTTCCAGGGTGTTACAAAG
AAGATGAAGCTGCTGTTAAAGAGATTTGAGAAGATATTTGATAGCATGATTGATGAAAGAAAAAATTTGGATAGAAATGGTGTTGGCCAAGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E553649] | SGN-U604190 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T356079 [Download][View] | Facility Assigned ID: ctsc1m2 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0028 | Quality Trim Threshold: 14.5 |
Working
