EST details — SGN-E553778

Search information 
Request: 553778Match: SGN-E553778
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332462Clone name: cTSC-2-D14
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E553778Length: 769 bp (1264 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553778 [] (trimmed) GTGCCCCAGGATATTTGCCGGAATCCCTTTTGTGCGGGAAGCCAATTTCCTGAATCCTTCTGCTGAGATTTCACCTCCCATATCCTGGAGTCTGC
TTTCAATTACCCTCGGGATAAGTTAGAGAGGCTATTTGGACAACACAAGGAGGGGATAATAATCAAAGCTAGTGAGGAGCAAATTCGAGCTATAA
GCGAACACGCCTCGCGCTCAACTCAGCAAACTAGAGGTAGAACACAGGGACCTTTCAATTTGATGAAGGAACGCCCGGTATTCGAAAGTAGATTT
GGACAGTTCTTTGAAGCACGTCCCGAAAGATACGAGCAATTGAGGGACTTGGATGCTGCTGTTGGTTTCATGAACATTAACCAAGGTGGAATGGT
ACTACCATACTACAACACGAAATCTACAAAATTGGTTATGGTCATAGAAGGGAACGCTCGATTTGAAATGGCATGTCCTCATCTTGGTAGACAAA
GCCAGAGCCCATGGTCTCGTGGACAAGGGAGAGAGCAAGAGCGAGAGCAAGAACAAGAACAAGAAGAAGGAGATGTCCATTACCAGAAAATCCGC
GGTAACCTAAACGTTGGTGATGTGTTGGTAATCCCTGCTGGCCATCCAATTACCTTTGTAGCAACCGGAAACTCGAATCTGAGGATCGTTGGTTT
CGGAGTCGATGCTGAGAACAACAAAAAGAACTTCCTTGCAGGTAAACAAAACATATGGAGGAACATAGACAGGGAAGCGAAAGAACTGTCCTTTT
AGCATGCCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553778] SGN-U578487 Tomato 200607 Build 2 163 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T356233 [Download][View] Facility Assigned ID: ctsc2d14
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.987 Expected Error Rate: 0.0151 Quality Trim Threshold: 14.5