EST details — SGN-E556077
| Search information |
| Request: 556077 | Match: SGN-E556077 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C329130 | Clone name: cTSD-2-F18 |
| ||
| Library Name: cTSD | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E556077 | Length: 881 bp (1238 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E556077 [] (trimmed)
CTCCCACCTGTCCGGACGGTTGTTTCTATGGAGTTAGCTTTTGGACTGGTAGTGAATGCTGAAGCCCAACTTGAATCCTGAAATATCTATTATAG
AACCAGTTATCTCGCTCTCAAAAACTATAAAATATCCACCCCATGAATTTATTGAGCTGTGGGACAGTTGGGAAATACTTACCTTCTTCATGGAG
AACTTAAGTTAAGGATCAGCCGTGATTTGAGAGCTTTACTAACTGATGCTGTATCATTAAATAAACGGGCTAAAATACGTGATGCGCTAGATGAT
ACGGTTCCAAGGGAAGACAAAATTACATCTTATCTTGTAAATGTATGTGAAGAGTGTGAAGAACTACTTATTAAGGCAGGAAGACAGTATAGGTT
AGCCTTGTCGATAGATGGGAATGATATGAGAGCTTTGTATAATTGGGGAATTGCTCTCTCGTTGCGTGGGCAGTTGATTGCAGACATTGGACCTG
GTTCTGCACGTGATGCCGACAAAGTTTTCTTGGCTGCAATTGATAAGTTCGATGCAATGATCTCCAGAGGAAATGTATATGCACCTGATGCTCTT
TTCAGATGGGCCACAGCATTGCAGCACAGATCTCGCCTACGACCTAGAACAAGTAGAGAGAAGGTGAAGTTATTGCAGCAGGCTCAAAGGTTATA
CAAAGATGCCCTTCATATGGACTCCGATAACCTTCAAGCACGAAAGGCCCTGTCATCCTGCATATCTGAGCTCAAGTACTGGTATAGATAGTCAT
ACAATAAATTTTAGTTATCCTTCTTTTTCTCCATTTGATAACATAAACCAAGTTTACATATTTATCATTCCCCATATGGTTGAAATAATAAGCAG
GGAAGCTTTACTTAATACCAAGTTCT
AACCAGTTATCTCGCTCTCAAAAACTATAAAATATCCACCCCATGAATTTATTGAGCTGTGGGACAGTTGGGAAATACTTACCTTCTTCATGGAG
AACTTAAGTTAAGGATCAGCCGTGATTTGAGAGCTTTACTAACTGATGCTGTATCATTAAATAAACGGGCTAAAATACGTGATGCGCTAGATGAT
ACGGTTCCAAGGGAAGACAAAATTACATCTTATCTTGTAAATGTATGTGAAGAGTGTGAAGAACTACTTATTAAGGCAGGAAGACAGTATAGGTT
AGCCTTGTCGATAGATGGGAATGATATGAGAGCTTTGTATAATTGGGGAATTGCTCTCTCGTTGCGTGGGCAGTTGATTGCAGACATTGGACCTG
GTTCTGCACGTGATGCCGACAAAGTTTTCTTGGCTGCAATTGATAAGTTCGATGCAATGATCTCCAGAGGAAATGTATATGCACCTGATGCTCTT
TTCAGATGGGCCACAGCATTGCAGCACAGATCTCGCCTACGACCTAGAACAAGTAGAGAGAAGGTGAAGTTATTGCAGCAGGCTCAAAGGTTATA
CAAAGATGCCCTTCATATGGACTCCGATAACCTTCAAGCACGAAAGGCCCTGTCATCCTGCATATCTGAGCTCAAGTACTGGTATAGATAGTCAT
ACAATAAATTTTAGTTATCCTTCTTTTTCTCCATTTGATAACATAAACCAAGTTTACATATTTATCATTCCCCATATGGTTGAAATAATAAGCAG
GGAAGCTTTACTTAATACCAAGTTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E556077] | SGN-U596070 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T352901 [Download][View] | Facility Assigned ID: ctsd2f18 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0067 | Quality Trim Threshold: 14.5 |
Working
