EST details — SGN-E556940
| Search information |
| Request: 556940 | Match: SGN-E556940 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C328786 | Clone name: cTSD-1-G3 |
| ||
| Library Name: cTSD | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E556940 | Length: 815 bp (1316 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E556940 [] (trimmed)
TCATCTAAGGCTAGGAACGAAGAAGAGGAGGTGGAGGAAGAGAGTCATGGCGGAGACAGGGGACGAAAATGCAGGGGAGTTTTACTTGAGGTACT
ATGTCGGCCACAAGGGTAAATTCGGGCATGAGTTCTTGGAGTTCGAGTTTAGGCCCGACGGCAAGCTGCGGTATGCTAATAATTCCAACTATAAG
AACGACACCATGATCCGTAAAGAGGTCTTCGTCACCCCCGCCGTTCTAAAAGAATGCCGTCGCATCGTCGTTGAAAGCGAGATAATGAAGGAAGA
TGACAACAATTGGCCAGAACCAGATCGCGTTGGAAGGCAAGAGCTGGAGATTGTAATGGGGAACGAGCACATATCTTTTACCACTGCTAAGATTG
GTTCTCTCGTGGATGTTAATATCAGTAAAGATCCTGAAGGTCTTCGAATCTTCTATTATCTTGTTCAGGATTTGAAGTGTTTCGTGTTTTCTCTT
ATCTCACTCCACTTCAAGATCAAACCCATTTGAGTGTCAGCCATATCACCCCCTGGAACAGAAGGAAAGCCATGTGTTTTGAAGTTGCTTGGTCT
GTTGTCCTTTGCCTTGATAAGTTCGTTATATATTTAAACTTATAAATAGCGTTGATTTGGGTGATTGTTCAAGTAGATGAAGTTTGTGATATGCT
AGTTGTGTAATTGAATATCTATTCCTTTTGCTCTTGATAAGCCCTCTTTTCCGCATTAATCAGTGGATCTTCAGGCTTGAGCCTAGGTTGACTCG
CATCTGATCAGCTCCTCCTTCCTGTTTCTAATTTAAGACGTGATTATTGCATCTT
ATGTCGGCCACAAGGGTAAATTCGGGCATGAGTTCTTGGAGTTCGAGTTTAGGCCCGACGGCAAGCTGCGGTATGCTAATAATTCCAACTATAAG
AACGACACCATGATCCGTAAAGAGGTCTTCGTCACCCCCGCCGTTCTAAAAGAATGCCGTCGCATCGTCGTTGAAAGCGAGATAATGAAGGAAGA
TGACAACAATTGGCCAGAACCAGATCGCGTTGGAAGGCAAGAGCTGGAGATTGTAATGGGGAACGAGCACATATCTTTTACCACTGCTAAGATTG
GTTCTCTCGTGGATGTTAATATCAGTAAAGATCCTGAAGGTCTTCGAATCTTCTATTATCTTGTTCAGGATTTGAAGTGTTTCGTGTTTTCTCTT
ATCTCACTCCACTTCAAGATCAAACCCATTTGAGTGTCAGCCATATCACCCCCTGGAACAGAAGGAAAGCCATGTGTTTTGAAGTTGCTTGGTCT
GTTGTCCTTTGCCTTGATAAGTTCGTTATATATTTAAACTTATAAATAGCGTTGATTTGGGTGATTGTTCAAGTAGATGAAGTTTGTGATATGCT
AGTTGTGTAATTGAATATCTATTCCTTTTGCTCTTGATAAGCCCTCTTTTCCGCATTAATCAGTGGATCTTCAGGCTTGAGCCTAGGTTGACTCG
CATCTGATCAGCTCCTCCTTCCTGTTTCTAATTTAAGACGTGATTATTGCATCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E556940] | SGN-U601751 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T352557 [Download][View] | Facility Assigned ID: ctsd1g3 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |
Working
