EST details — SGN-E557099
| Search information |
| Request: 557099 | Match: SGN-E557099 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C329739 | Clone name: cTSD-3-P13 |
| ||
| Library Name: cTSD | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E557099 | Length: 460 bp (1252 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E557099 [] (trimmed)
CAGTAACGTACCTCCAACTTCAGTTAATAGTGTGCCTACCCCTGCTGATTATATCCCAACAACTCTTCCTTCCTCAAAGCGAGTTTGCCTTCGGC
CACCAAGGTCGTTTCCTTGTTATGGCTGGATTGAAAGTGACAGTGAAGAGGATGCTGATGACTTCATACAATTACAACCAATGAAATGCGTCGAG
TTGTAGGGGCTTGCTTATTTAGCCAAAAGACTCAACAATCACCATGCTTGCTGCTTCTTCCATTTAGTTTCTCTTTTGGGTTATCATAAGTAATA
GACCATACATGAAACCATAGATGCTGCCTGTGAACTTCCACCATGGATGCCAGAGTTGTTCATTTTCCTTGTGTAATATCTCTACAACCTATTCA
ACCAACTGTATCCAATTCGAGATTGGTTTTGCAATTTATTGCGCTTCACAATTTGGTTTTATTTTTCAGAAAAAAGGTTT
CACCAAGGTCGTTTCCTTGTTATGGCTGGATTGAAAGTGACAGTGAAGAGGATGCTGATGACTTCATACAATTACAACCAATGAAATGCGTCGAG
TTGTAGGGGCTTGCTTATTTAGCCAAAAGACTCAACAATCACCATGCTTGCTGCTTCTTCCATTTAGTTTCTCTTTTGGGTTATCATAAGTAATA
GACCATACATGAAACCATAGATGCTGCCTGTGAACTTCCACCATGGATGCCAGAGTTGTTCATTTTCCTTGTGTAATATCTCTACAACCTATTCA
ACCAACTGTATCCAATTCGAGATTGGTTTTGCAATTTATTGCGCTTCACAATTTGGTTTTATTTTTCAGAAAAAAGGTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E557099] | SGN-U565678 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T353510 [Download][View] | Facility Assigned ID: ctsd3p13 |
| Submitter: Koni | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |


