Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E560514

Search information 
Request: 560514Match: SGN-E560514
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C338346Clone name: 20181
nocartOrdering Not Available
Library Name: SWSTOrganism: Solanum tuberosum

Tissue: Stolon
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E560514Length: 435 bp (1024 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E560514 [] (trimmed) CAACGATATCGTAGGTATCAATTTGGAAGAGGCTTGTTCCTTGGCATTGCTCTCTCAAAGAATGACTCTTATGTAATGTCAGCTGCTGGTGGAAA
AGTGTCACTATTCAATATGATGACGTTTAAGGTAATGACAACATTTATGCCACCTCCGCCGGCTTCAACTTTCTTAGCATTCCATCCTCAAGATA
ACAATATTATCGCCATTGGCATGGAGGACTCAACAATCCACATTTACAATGTTAGGGTTGATGAGGTAAAATCCAAGTTAAAAGGCCATCAGAAG
CGCATTACTGGTCTTGCTTTCTCCACCAACCTCAACATATTGGTTTCATCAGGTGCTGATGCTCAGCTCTGTTTATGGAGCATTGATTCATGGGA
CAAGAGGAAATCAGTTCCCATTCAGCTGCCTGCTGGTAAAGCACCTAGTGGTGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E560514] SGN-U299001 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T362211 [Download][View] Facility Assigned ID: bf_swstxxxx_0045e09.t3m
Submitter: Rebecca Griffiths Sequencing Facility: GASF
Funding Organization: Genome Atlantic
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0040 Quality Trim Threshold: 12.5