Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E574440

Search information 
Request: 574440Match: SGN-E574440
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C351910Clone name: 33908
nocartOrdering Not Available
Library Name: IVROOTOrganism: Solanum tuberosum

Tissue: Root
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E574440Length: 703 bp (898 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E574440 [] (trimmed) TGAATTGAGCATTGGGGCTTGTTCAAAATCAAAATAACTTGCAAGCTACATGATTACATACATAGATTTGCAACAGCAGCCAATTTTTTTGAAAA
ACATAGAACAAATAGAAAGCAAACTCACTAGACCTAACAGTTTCACCAGGATCTTATGCAAAATACTAGGAGAGCCCCATAATTTCTACATCATT
TTCGACGATTCAATGGAAAAAACATAAGGTAGGATAGAGATGATAGTTGTTGAAGGCATGGCTCATAGCATGCAGTCTGTTCTAGCAGGCAACCT
TCTGAAGAAGTTAAGCGGCACAGATGGAAGCTTGTAGCGGAACCTTGGATGTCTTAATACATAAAATCCTGTCTAAGAGACCTACGGCTTGGAAT
GGAGTGACATAGAGAACAACAGCAGCAGCCAAGCAGAAAATCACGAACAATGCTGTTGCTCTAGGGTCCCTCCAGCTCAGCAAAGACTGCAGCCT
CTCTCCTTGAGTAGCCAAGTCGCCAACCACGGTCTGAATCCTCCCTGGCAATACTTCTTATGCGGTCATACCTCATCCTGATAATATCAGGAGAA
CGTGAAGTAGGGAAAGTATCAAATTCCTCATCCAGCTCATCGGGATGAGCAGTATCAGCACAAGAAAGTCGAGTATCCATGTGAGGAGGATGTCT
TGGGCTCAATCTATAGTACCAAATTTCCGATCAAGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E574440] SGN-U290607 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T375681 [Download][View] Facility Assigned ID: bf_ivrootxx_0034a09.t3m
Submitter: Rebecca Griffiths Sequencing Facility: GASF
Funding Organization: Genome Atlantic
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0058 Quality Trim Threshold: 14.5