EST details — SGN-E641264
Search information |
Request: 641264 | Match: SGN-E641264 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C423564 | Clone name: cccp6g22 |
| ||
Library Name: cccp | Organism: Coffea canephora |
Tissue: Pericarp
Development Stage: All development stages combined
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E641264 | Length: 459 bp (560 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E641264 [] (trimmed)
GAAGCATCTCAGGATATACTGAAGTCAATGCACAACAATTATCGAAATCAAGGATTTCAACTTTTTGTCAGTTTCTTTGAGATATATGGAGGCAA
GGTTTTTGACCTGCTAAATGATAGAAACAAGCTATGCATGAGAGAGGACGGGAAGCAGCAGGTCTGTATTGTAGGTTTGCAAGAATACAAGGTAT
CCACTGTGGAGACAGTCAGGGAGTTGATTGAGAAAGGAAATGCAACAAGGAGTACTGGAACCACTGGTGCAAATGAGGAATCCTCCCGTTCGCAT
GCCATACTTCAGCTCGCAATCAAAAGAAAGGTTGATGACAATGATTCAAAACCAGCTCGACTAGTTGGCAAGCTATCTTTCATTGATCTTGCTGG
AAGCGAACGTGGGGCTGATACAACTGATAATGACAAACAAACTACAATGGAAGGTGCTGAAATTAACAAGAGCTTACTT
GGTTTTTGACCTGCTAAATGATAGAAACAAGCTATGCATGAGAGAGGACGGGAAGCAGCAGGTCTGTATTGTAGGTTTGCAAGAATACAAGGTAT
CCACTGTGGAGACAGTCAGGGAGTTGATTGAGAAAGGAAATGCAACAAGGAGTACTGGAACCACTGGTGCAAATGAGGAATCCTCCCGTTCGCAT
GCCATACTTCAGCTCGCAATCAAAAGAAAGGTTGATGACAATGATTCAAAACCAGCTCGACTAGTTGGCAAGCTATCTTTCATTGATCTTGCTGG
AAGCGAACGTGGGGCTGATACAACTGATAATGACAAACAAACTACAATGGAAGGTGCTGAAATTAACAAGAGCTTACTT
Unigenes |
Current Unigene builds | |||||
[SGN-E641264] | SGN-U615053 | Coffea canephora | Build 3 | 3 ESTs assembled | |
[SGN-E641264] | SGN-U632965 | Coffee species | Build 1 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T447427 [Download][View] | Facility Assigned ID: cccp6g22.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |