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EST details — SGN-E642666

Search information 
Request: 642666Match: SGN-E642666
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C442522Clone name: cccs30w12b21
nocartOrdering Not Available
Library Name: cccs30wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E642666Length: 527 bp (1024 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E642666 [] (trimmed) AATTGCATGTGCGTACACTTTACAACATCAAGCACCATTCCGAAACATGCTTTTCTATGGCCCTCCAGGAACAGGAAAGACGATGGCTGCAAGAG
AGCTTGCTCAGAGATCTGGTCTTGACTATGCATTGATGACTGGAGGAGATGTTGCGCCACTGGGGTCGCAGGCTGTTACTAAAATACATCAGTTG
TTTGATTGGTCAAAAAAGTCGAAGAAGGGTTTATTGCTATTCATTGATGAAGCAGATGCATTTTTGTGCGAGCGGAACAAAATATATATGAGTGA
AGCTCACAGGAGTGCTCTCAATGCCCTTCTGTTCCGCACAGGCGACCAGTCCAAAGACATAGTTCTTGCTTTGGCAACTAACCGTCCAGGAGATC
TTGACACTGCTGTGGCTGACCGCATTGATGAAGTTCTGGAATTTCCTTTGCCTGGCGAAGATGAACGCTTCAAGATGCTCAAGCTCTACCTTGAC
AAGTATATAGCTCAGGGTGGAGAAAGAAATCAAGCTTGGTCTCCATTTCTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E642666] SGN-U623957 Coffea canephora Build 3 1 ESTs assembled
[SGN-E642666] SGN-U643786 Coffee species Build 1 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T466385 [Download][View] Facility Assigned ID: cccs30w12b21.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15