EST details — SGN-E646389
| Search information |
| Request: 646389 | Match: SGN-E646389 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C446245 | Clone name: cccs30w20c16 |
| ||
| Library Name: cccs30w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E646389 | Length: 744 bp (1026 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E646389 [] (trimmed)
GGTCCTTGACTTTGAGACCATCGTTGTTATCACAGTCATCTTCTTCAGCTTCAGCTTCAGCTTCGTCGTCAAATTGGTCGTTGGCTTTGGTATCC
TGGCGTAACAATTGGCAGAATTCTTCCTCGATTAATTGCCGGACGAAATCATCAGCTTACAAAGGTAGATTAATCTTGAGAGCTCAATCTTTTGA
TAGCAGTAGTGAGGACAGTAACAACAAGAACAACAACTCCAATGCTGCTGGTTCTCAACCTTCCAACGGCACTCTGCATAAAAGCAGGAGGGAAA
TTCTATTGGAATATGTGCAAAATGTGCAGCCTGAATTCATGGAATTGTTTGTTAAGAGGGCACCCCAGCAGGTGGTTGAAGCTATGCGACATACT
GTGACAAATATGATAGGGACACTGCCGCCGCAATTTTTTGCAGTAACTGTGACCACTGTTGCTGAGAATCTTGCACAGCTCATGTATAGTGTTCT
GATGACTGGATATATGTTCAGGAATGCACAATACCGGATAGAATTGCAACAAAGCTTGGAGCAAGTTGCTCTCCCTGAACCACCAAAGAGCAAGG
ATGGACCAGAATTTGCACCTGGCACACAGAAAAAAGTGACTGGAGAAGTTATCATATGGAAACATGTTTCTGGTCCCTGAAAACTAGATGCAGTG
AAATACATTGAGTTGCTGGAAGCAGAAATAGAGGAACTCAACCGTCAGATTGAAGAAAATCTAGTGATGGCCAGAATGA
TGGCGTAACAATTGGCAGAATTCTTCCTCGATTAATTGCCGGACGAAATCATCAGCTTACAAAGGTAGATTAATCTTGAGAGCTCAATCTTTTGA
TAGCAGTAGTGAGGACAGTAACAACAAGAACAACAACTCCAATGCTGCTGGTTCTCAACCTTCCAACGGCACTCTGCATAAAAGCAGGAGGGAAA
TTCTATTGGAATATGTGCAAAATGTGCAGCCTGAATTCATGGAATTGTTTGTTAAGAGGGCACCCCAGCAGGTGGTTGAAGCTATGCGACATACT
GTGACAAATATGATAGGGACACTGCCGCCGCAATTTTTTGCAGTAACTGTGACCACTGTTGCTGAGAATCTTGCACAGCTCATGTATAGTGTTCT
GATGACTGGATATATGTTCAGGAATGCACAATACCGGATAGAATTGCAACAAAGCTTGGAGCAAGTTGCTCTCCCTGAACCACCAAAGAGCAAGG
ATGGACCAGAATTTGCACCTGGCACACAGAAAAAAGTGACTGGAGAAGTTATCATATGGAAACATGTTTCTGGTCCCTGAAAACTAGATGCAGTG
AAATACATTGAGTTGCTGGAAGCAGAAATAGAGGAACTCAACCGTCAGATTGAAGAAAATCTAGTGATGGCCAGAATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E646389] | SGN-U623537 | Coffea canephora | Build 3 | 1 ESTs assembled | |
| [SGN-E646389] | SGN-U634766 | Coffee species | Build 1 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T470108 [Download][View] | Facility Assigned ID: cccs30w20c16.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
