EST details — SGN-E647871

Search information 
Request: 647871Match: SGN-E647871
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C447727Clone name: cccs30w29h2
nocartOrdering Not Available
Library Name: cccs30wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 30 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E647871Length: 635 bp (987 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E647871 [] (trimmed) GAGACGCACCGCTTTCTCTGGTCTGGTCTTTGGTCCGTCAATTCGACAACCCACAAGCCTACAAGCGGTTCATCAAGAACTGCACCATGATAGCC
GGTGACGGCGGCATCGGAAGCGTCCGGGAGGTCATGGTCGTGTCAGGTTTGCCGGCTGAAACAAGCAGGGAAAGACTAGATAAACTGGATGATGA
CTTGCATGTTATGGAGTTCAGCATAATTGGCGGCGATCACAGGCTCGTGAATTATCAGTCCACAACTATTTTGCATGAGGATGATGGGGGAAGGA
GCGATCAGACGGTGGTGATTGAATCTTACGTTGTGGATATTCCACCGGACAGTAGTGAGATGGATACGTGCTTGTTTGCTGACACCATAGTTGCC
TGTAACCTGAGGTCTTTGGCTAAAATCAGTGAGAAAATGGCACGGAAAGTTCAAGTTCCTCCAGCTGCATGACTCTTCAAGCTTTTGAATTTTCC
TATTTCTCCTTTTCTATTTTGTTGGCTGGACTTTTTCTAGTCATTTGGATTCCAGTGTTTTCTTTTTTTTGGGTTTTTTGTGCTTGTTTTAATTA
GATCTCGTAAGAATTAATTAACGCAACTCAAAGTTACTTTTTCATTTAGTTTTTTTTTTTTTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E647871] SGN-U619359 Coffea canephora Build 3 2 ESTs assembled
[SGN-E647871] SGN-U629358 Coffee species Build 1 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T471590 [Download][View] Facility Assigned ID: cccs30w29h2.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15