EST details — SGN-E661727
| Search information |
| Request: 661727 | Match: SGN-E661727 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C410509 | Clone name: cccl19h15 |
| ||
| Library Name: cccl | Organism: Coffea canephora |
Tissue: LeafB
Development Stage: Young
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E661727 | Length: 960 bp (1240 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E661727 [] (trimmed)
TGTGTTTCTGAATTTTATTCCCCTTACACTGATATACAAGTTTACCATCCCTTCAGTTATAACGCCTCCTTCAGCTCTTGATCGTCTTGCTTACC
TACAGATTGAATATCCTATGTTATTTGAACTGAGTAACCCCTCTGCTGGTAGAGTTTCTCACTGTGGGGTGCTAGAATTTGTTGCAGATGAAGGC
CTTGTATACATACCTTATTGGATGATGGAAAACATGCTTCTGCAAGAGGGGGACATTGTGCACATCAAGAATGCCAGTTTGTCTAAGGGAACATA
TGTGAAGTTGCAGCCTCACACCACAGACTTCTTAGGTGTATCCAATCCAAAAGCAATCTTGGAGACAACATTAAGGAACTACTCTTGTTTAACAA
CTGGTGATACCATCATGGTTGCGTATAACAATAAGAAGTTTTACATCGACATAGTAGAAACAAAGCCCTCCGCAGCTATTAGCATTATTGAAACT
GACTGTGAAGTTGATTTTGCCCCTCCTTTGGATTTTAAAGAACCGGAAAAGCCAGAAAAGCCTTCCCTGTCTAACAAGGTGCCGCCAGAAGTGGA
TGAAGAGCCAGCCAAGAAAATACCGAAGTTCAACCCATTTAGTGGTTCATCAAGACGCTGGGATGGAAGACCTGCATTGCAGTCACCTCCATCAA
CTTTCTCTCCTGTGCCCAAACAGCAGCATAAAGAGGAGTCTGGGGGGACAAATGTTCTAACTTCATCTGCTTCTACCTCACGCCGGTTTTCGGGG
AAACTTGTTTTTGGTTCAAATGTGGAAAATTCTTCAAGTGGAAAACAAAAAGCTGCCTCAAAGGAGAACAATGAATATTCTGTTTCGGAGGCTGA
AGCAAAATTCCAAGCATTCACAGGGAAGAAGTATTCACTGAAAGAACTAATCTAGTTCCTCCATTTGCTCCTTTGTTTTAAGAATCTCTCCTTAT
TTTAGTTATT
TACAGATTGAATATCCTATGTTATTTGAACTGAGTAACCCCTCTGCTGGTAGAGTTTCTCACTGTGGGGTGCTAGAATTTGTTGCAGATGAAGGC
CTTGTATACATACCTTATTGGATGATGGAAAACATGCTTCTGCAAGAGGGGGACATTGTGCACATCAAGAATGCCAGTTTGTCTAAGGGAACATA
TGTGAAGTTGCAGCCTCACACCACAGACTTCTTAGGTGTATCCAATCCAAAAGCAATCTTGGAGACAACATTAAGGAACTACTCTTGTTTAACAA
CTGGTGATACCATCATGGTTGCGTATAACAATAAGAAGTTTTACATCGACATAGTAGAAACAAAGCCCTCCGCAGCTATTAGCATTATTGAAACT
GACTGTGAAGTTGATTTTGCCCCTCCTTTGGATTTTAAAGAACCGGAAAAGCCAGAAAAGCCTTCCCTGTCTAACAAGGTGCCGCCAGAAGTGGA
TGAAGAGCCAGCCAAGAAAATACCGAAGTTCAACCCATTTAGTGGTTCATCAAGACGCTGGGATGGAAGACCTGCATTGCAGTCACCTCCATCAA
CTTTCTCTCCTGTGCCCAAACAGCAGCATAAAGAGGAGTCTGGGGGGACAAATGTTCTAACTTCATCTGCTTCTACCTCACGCCGGTTTTCGGGG
AAACTTGTTTTTGGTTCAAATGTGGAAAATTCTTCAAGTGGAAAACAAAAAGCTGCCTCAAAGGAGAACAATGAATATTCTGTTTCGGAGGCTGA
AGCAAAATTCCAAGCATTCACAGGGAAGAAGTATTCACTGAAAGAACTAATCTAGTTCCTCCATTTGCTCCTTTGTTTTAAGAATCTCTCCTTAT
TTTAGTTATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E661727] | SGN-U619070 | Coffea canephora | Build 3 | 3 ESTs assembled | |
| [SGN-E661727] | SGN-U637020 | Coffee species | Build 1 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T434372 [Download][View] | Facility Assigned ID: cccl19h15.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
