EST details — SGN-E662140
| Search information |
| Request: 662140 | Match: SGN-E662140 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C410922 | Clone name: cccl22l18 |
| ||
| Library Name: cccl | Organism: Coffea canephora |
Tissue: LeafB
Development Stage: Young
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E662140 | Length: 868 bp (1085 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E662140 [] (trimmed)
GGAAAATCACTTTCTGTTTCCCCTTAAAATGTCCAAATTCTTCGCTTTCATATCCCACCAATCCTGATCTGTTGCCGTTTTAGTTTCCCCCTGCC
ATGGAAACCATCCTCTCCCCTTCTTCATTCTGCCCGCTCTTCAACCCCAAGATTTCATCCCTTCAATCCAAACCAACTTCCCTAGTACTCGGTAA
AAGTAGCAGTACCATTTGCTCTTGCCTCGAGAAACAACCAACTCAGTTATCTGTTAGTGATAAACAATCTTCTTCATCTCCTACAAATTGGCTTT
CTCATGTCCAGCAAGGTCTTGCAGCTCTAGCAATTTCTCTTGCACTCAGTTACTGCCCAATCTTACCTACTCACTCTGCATTTGCATCTGAATTT
GATGTACTAAATGACCGTCCACCAACAGAATCATATGTGGTTGATGATGCTAATGTTCTTAGCAGGCTCACAAAATCCGACTTGAAAAGATTGTT
ATCTGATCTTGAATCAAGAAATGGGTACCACATTAATGTCATCACTGTCCGAAAACTCACTAGCAAAGCTGATGCTTTTGAGTATGCTGACCAAG
TTTTAGAACGTTGGTACCCTTCTCTTGAAGAAGGCAATAATAAGGGGATAGTTGTTCTTGTCACCAGTCAAAAGGAAGGTGCAATTACTGGAGGC
CCTGAATTTATTCAGGCTGTTGGTGATACTGTTCTTGATGCCACTGTCTCTGAAAATCTTCCAGTGCTAGCAACTGACGAGAAATACAATGAAGC
AGTATACAGCACTGCCAAGCGTCTGGTTTCTGCAATTGATGGGCTCCCTGACCCTGGTGGCCCCAAATTCCAGGATAACAAAAAAGAATCTAACT
TCAAATCCGGGGA
ATGGAAACCATCCTCTCCCCTTCTTCATTCTGCCCGCTCTTCAACCCCAAGATTTCATCCCTTCAATCCAAACCAACTTCCCTAGTACTCGGTAA
AAGTAGCAGTACCATTTGCTCTTGCCTCGAGAAACAACCAACTCAGTTATCTGTTAGTGATAAACAATCTTCTTCATCTCCTACAAATTGGCTTT
CTCATGTCCAGCAAGGTCTTGCAGCTCTAGCAATTTCTCTTGCACTCAGTTACTGCCCAATCTTACCTACTCACTCTGCATTTGCATCTGAATTT
GATGTACTAAATGACCGTCCACCAACAGAATCATATGTGGTTGATGATGCTAATGTTCTTAGCAGGCTCACAAAATCCGACTTGAAAAGATTGTT
ATCTGATCTTGAATCAAGAAATGGGTACCACATTAATGTCATCACTGTCCGAAAACTCACTAGCAAAGCTGATGCTTTTGAGTATGCTGACCAAG
TTTTAGAACGTTGGTACCCTTCTCTTGAAGAAGGCAATAATAAGGGGATAGTTGTTCTTGTCACCAGTCAAAAGGAAGGTGCAATTACTGGAGGC
CCTGAATTTATTCAGGCTGTTGGTGATACTGTTCTTGATGCCACTGTCTCTGAAAATCTTCCAGTGCTAGCAACTGACGAGAAATACAATGAAGC
AGTATACAGCACTGCCAAGCGTCTGGTTTCTGCAATTGATGGGCTCCCTGACCCTGGTGGCCCCAAATTCCAGGATAACAAAAAAGAATCTAACT
TCAAATCCGGGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E662140] | SGN-U615946 | Coffea canephora | Build 3 | 3 ESTs assembled | |
| [SGN-E662140] | SGN-U630092 | Coffee species | Build 1 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T434785 [Download][View] | Facility Assigned ID: cccl22l18.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
