EST details — SGN-E669577
| Search information |
| Request: 669577 | Match: SGN-E669577 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C458244 | Clone name: cccs46w23o16 |
| ||
| Library Name: cccs46w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E669577 | Length: 847 bp (1283 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E669577 [] (trimmed)
GGAGAAAGAGAGACAGAGAGAGAAACTTACTCCCCACTCAAAGAAACTGAACATAACTCTCGACATCAATCAAGTTTATCATACCCGCATACCCG
CAGAGAAGGAGACCGAGACGGAGACAGGAAAGAGAAGAAAAAGAAGGGAAACTTTTAGCACTATCATATTTGCGTATTAGGTTTTCTTGCTTTCT
TGCCTTAATTGATTGATTCTTGATACAGAAAGAGAGAGGGAAAGAGGTTTGCAAGAGAATGGAAGGAGCCAGTAATGGAGGGATGTTGTATCATG
AAGTACAAGAGTCGAAGCTGTGCGCGGTGCATTGCGTGAATACAGTGTTGCAGGGCCCATTCTTCTCGGAATTCGATTTGGCGGCCCTTGCTTCC
GATCTCGACCGCCGGGAGCGTCAGATGATGCTGCAAGCCGGCGGTGATTTCCTCCCCGACCCCGACGAGTCCCACAACGTCTCCCTCGACGGCGA
TTTTAGCATACAGGTCCTGGAAAAGGCTTTGGAGGTATGGGATTTGCAAGTTATACCTCTTAACAGTCCTGTTGCTGAACCTGCACAAATTGACC
CAGAGCTTGAAAATGCATTTATCTGTCATTTACAAAATCATTGGTTCTGTATCAGGAAAGTAAATGGAGAATGGTATAACTTTGATAGTCTTTAT
GCAGCACCTGAGCACCTATCCAAGTTTTACCTTTCTGCCTATCTGATTTCTCTGAGGGGTTCAGGTTGGAGCATTTTCCTCGTAAGAGGTAATTT
TCCAAAGGAGTGCCCTATAGCATCTTCTGAATCTTCTAATGGGTACGGGCAGTGGTTGTCCCCTGAAGATGCTGAGAGAATTACAAA
CAGAGAAGGAGACCGAGACGGAGACAGGAAAGAGAAGAAAAAGAAGGGAAACTTTTAGCACTATCATATTTGCGTATTAGGTTTTCTTGCTTTCT
TGCCTTAATTGATTGATTCTTGATACAGAAAGAGAGAGGGAAAGAGGTTTGCAAGAGAATGGAAGGAGCCAGTAATGGAGGGATGTTGTATCATG
AAGTACAAGAGTCGAAGCTGTGCGCGGTGCATTGCGTGAATACAGTGTTGCAGGGCCCATTCTTCTCGGAATTCGATTTGGCGGCCCTTGCTTCC
GATCTCGACCGCCGGGAGCGTCAGATGATGCTGCAAGCCGGCGGTGATTTCCTCCCCGACCCCGACGAGTCCCACAACGTCTCCCTCGACGGCGA
TTTTAGCATACAGGTCCTGGAAAAGGCTTTGGAGGTATGGGATTTGCAAGTTATACCTCTTAACAGTCCTGTTGCTGAACCTGCACAAATTGACC
CAGAGCTTGAAAATGCATTTATCTGTCATTTACAAAATCATTGGTTCTGTATCAGGAAAGTAAATGGAGAATGGTATAACTTTGATAGTCTTTAT
GCAGCACCTGAGCACCTATCCAAGTTTTACCTTTCTGCCTATCTGATTTCTCTGAGGGGTTCAGGTTGGAGCATTTTCCTCGTAAGAGGTAATTT
TCCAAAGGAGTGCCCTATAGCATCTTCTGAATCTTCTAATGGGTACGGGCAGTGGTTGTCCCCTGAAGATGCTGAGAGAATTACAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E669577] | SGN-U624534 | Coffea canephora | Build 3 | 1 ESTs assembled | |
| [SGN-E669577] | SGN-U634462 | Coffee species | Build 1 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T482107 [Download][View] | Facility Assigned ID: cccs46w23o16.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
