Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E669924

Search information 
Request: 669924Match: SGN-E669924
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C458591Clone name: cccs46w21j20
nocartOrdering Not Available
Library Name: cccs46wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E669924Length: 895 bp (1274 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E669924 [] (trimmed) GATGCATTTCAACATTATTGATCATTCTTTCATGGGTGATCATTTGACTCTATTATCTACCTTTTGTTTGAAACTAGCGAAAGAGGACAGTGCTT
TAAATTTTCTTGACATTTTTTTAGCAGGATTGTAGTTTGCAACTTCTTATGATAATGAGTTTGTGGGGGATTAATGGGACAGTTGAAATCAGATA
CAGGAATAAGCATCATTTGGTTTTCAAGTGAACTATATATTCTCGAGAACCCCGCAAGTCTTAAGCAAATTTGATTTTTAGGTTGGAGCATTTAA
GATGTTCTCTTTCTTTCTTTTTCTACAATAATTCACTATATAATTGCTTCCCCCTCGTAGAGAAACAGGTAAAACACTTATTGCAAAAGAGCTTT
GCCTACTTCACTATGCCCTTGATATGCATTCATCATGTAGATTGACTTTTTAGAAGTTTGTTTTGCCATGTATGCCAATGGAAATTATAGCTTTC
CAATTAAATGGAAGTATCCTTGTATCTTTTGGTTTTATCTTATTATTATTATTATTTTGGCGTTTTGAAATTTCACTCTTCTCCAGACATATTAA
AATTGTTCTAATTCCTTGCAGGAGAAACTAATGCAAAGACTGTGGAAGCTTTGGTTAAGGGCACTGGAAAAGAATCTCTACAATGGGGATTGGCT
GCTGGAATGTATTCTGGTCTTACATATGGATTAAAGGAGGCTCGTGGAGTTCATGATTGGGTAATCATGGTGCATTTTGATTTGCATGGTCATGA
CTTTCTGGGGATACTCGTCTCACTTTTACTTTCTCCACTGCTTTTTGTAAACATCTAGCTAAAATCCTTCAAGATAGAGTGAGGTTGAATATCTT
AGCACATTTTTATATGCATAATATCGGGTTAACCTACCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E669924] SGN-U626042 Coffea canephora Build 3 1 ESTs assembled
[SGN-E669924] SGN-U639271 Coffee species Build 1 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T482454 [Download][View] Facility Assigned ID: cccs46w21j20.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15