EST details — SGN-E674676
| Search information |
| Request: 674676 | Match: SGN-E674676 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C463344 | Clone name: cccs46w28o20 |
| ||
| Library Name: cccs46w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E674676 | Length: 910 bp (1627 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E674676 [] (trimmed)
GGATTGGTACCCTCTAATGTCAAGCCCGAAGGCGCGATATGCTGAACAAATTAGAAGTCACGCTTCTTCGCCATCTCCCCAGCAACGGAAACTGC
AATTTTGAACTTTCTCAAAGCTTAATAACCATCGCCAGTCCACCGGCTCTCCTCCCGCGTCAATTCACTTCTAGCTCCTCTTCTCTTTCCCTACA
ACCCCGAAGAACCAGGCTCCGCTGCCATGCCATCGTCGCCAGCGCACGTCATCATCGCCGACATTTACTGAGTCCACATAAATTCCCGCCTGCCC
GGAATTGGTCACTTGGTTCGGGTCAAGTGTTCAATGGCAGACTCTGTCGGACCTCAACAACAGCAAGTTTGTATTTTCTTCAAAAAGCCATCTAA
GGGCAAAAACATCAGAAAGTGCCCTGCTTTTCAAGAAGATAATGGCGATGATGATTCAGTGGGCGAGAGCTCTGTAATTTATAAGAAGAAGCCAG
CAGCAGCTAACAACAAGTTACACTTCTCTATTGGATCCTCAAAGCGTTCCATTGAGATAGAAACTATTGTAGACTCAAGAACCCCATTTTTTTTG
CTTTGAATCTTCTAAAGAAATTCAGGTTCATCATGATGGTAGAGTAACAGCAACATTAGAAACTGAGACTGGGTTCTCAAGAGATGCTCAGGCAA
TCAGGGAGAGAGTTCTCAAGCAAGCAGAGGAGGGATTGAAAGGAAAAGGCACATCAACTAATGATGAAAAACTGTACAAAGGGATACATGGAGAC
ACTGATTACAAGTCTGGGTTTCGCGAGAACATATGTTCTCCGGTGAGGAAGCTGGTGGCGCACATGGACCTCTTAGAGCATCTGACCACATTAGA
GTATCAGCAAGGTTTGACTATCACCCAGATATCTGCAAGGATAATAAATCTGGAT
AATTTTGAACTTTCTCAAAGCTTAATAACCATCGCCAGTCCACCGGCTCTCCTCCCGCGTCAATTCACTTCTAGCTCCTCTTCTCTTTCCCTACA
ACCCCGAAGAACCAGGCTCCGCTGCCATGCCATCGTCGCCAGCGCACGTCATCATCGCCGACATTTACTGAGTCCACATAAATTCCCGCCTGCCC
GGAATTGGTCACTTGGTTCGGGTCAAGTGTTCAATGGCAGACTCTGTCGGACCTCAACAACAGCAAGTTTGTATTTTCTTCAAAAAGCCATCTAA
GGGCAAAAACATCAGAAAGTGCCCTGCTTTTCAAGAAGATAATGGCGATGATGATTCAGTGGGCGAGAGCTCTGTAATTTATAAGAAGAAGCCAG
CAGCAGCTAACAACAAGTTACACTTCTCTATTGGATCCTCAAAGCGTTCCATTGAGATAGAAACTATTGTAGACTCAAGAACCCCATTTTTTTTG
CTTTGAATCTTCTAAAGAAATTCAGGTTCATCATGATGGTAGAGTAACAGCAACATTAGAAACTGAGACTGGGTTCTCAAGAGATGCTCAGGCAA
TCAGGGAGAGAGTTCTCAAGCAAGCAGAGGAGGGATTGAAAGGAAAAGGCACATCAACTAATGATGAAAAACTGTACAAAGGGATACATGGAGAC
ACTGATTACAAGTCTGGGTTTCGCGAGAACATATGTTCTCCGGTGAGGAAGCTGGTGGCGCACATGGACCTCTTAGAGCATCTGACCACATTAGA
GTATCAGCAAGGTTTGACTATCACCCAGATATCTGCAAGGATAATAAATCTGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E674676] | SGN-U628779 | Coffea canephora | Build 3 | 1 ESTs assembled | |
| [SGN-E674676] | SGN-U641701 | Coffee species | Build 1 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T487207 [Download][View] | Facility Assigned ID: cccs46w28o20.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
