EST details — SGN-E690406
| Search information |
| Request: 690406 | Match: SGN-E690406 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C467412 | Clone name: LH_Ea03G20 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C467412 [LH_Ea03G20] | Trace: SGN-T493242 | EST: SGN-E694246 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E690406 | Length: 856 bp (983 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E690406 [] (trimmed)
CCTGTGGATCTGTATGGAAACATCGTCCTCAGTGGTGGTACCACTATGTTCCCTGGTATTGCTGATAGGATGAGCAAGGAAATTACTGCATTAGC
TCCTAGTAGCATGAAGATCAAGGTTGTTGCCCCACCTGAGAGGAAGTACAGTGTCTGGATCGGAGGATCTATTTTGGCCTCCCTCAGCACATTCC
AGCAGGTACGTAAAATCTATCAACTTTTTGTGGTCTGATTCATTTCCAAGTTGCACATCTTAAAGCTTATTTACTATCTTCATAAGCAGTAGATT
GCTTTAACATAAAAACCAATTTGTTTCTATGACTTCACTATGCTTGAGAAATTCGAATTATCTGAGAGAAAATGCTAACCAACCCTTCCTATGCT
AAATGCTGAACTCTTTCGAAGGAATGTGATGAACAGTTGTCAAGGGCGCGTAAGATATTTACTTACGAGATTTCTTTTCTCATGATACAGATGTG
GATAGCTAAGGCAGAGTATGATGAATCTGGACCTTCAATCGTTCACAGGAAATGCTTCTAAATACAGCACGTCGAGTAAGAGATAAGTGAAGAAA
TATACAAACTTGCATTTCCAGAGCAGCTCCCTGTCGATTGGTTGCATATAATATGCTTCTCATTTGTATTTCCTTTTGATTTATTTTTGTTTCAA
TCTCAAATATTTGGTCATTGGTATGATTAAAAAAAAAGAAAGTCAATTTACCATTAATATTTTTATGTAGAAGAGTTGTATTTCAAAAATGTTGT
GATTTGGATTATGGATAAAAAGCTTTGTTGATTCATTTTATGTATACTTTTGGTCTCAATTTTTATGTACTCAAACTAAAAAACATTTTTCATTT
C
TCCTAGTAGCATGAAGATCAAGGTTGTTGCCCCACCTGAGAGGAAGTACAGTGTCTGGATCGGAGGATCTATTTTGGCCTCCCTCAGCACATTCC
AGCAGGTACGTAAAATCTATCAACTTTTTGTGGTCTGATTCATTTCCAAGTTGCACATCTTAAAGCTTATTTACTATCTTCATAAGCAGTAGATT
GCTTTAACATAAAAACCAATTTGTTTCTATGACTTCACTATGCTTGAGAAATTCGAATTATCTGAGAGAAAATGCTAACCAACCCTTCCTATGCT
AAATGCTGAACTCTTTCGAAGGAATGTGATGAACAGTTGTCAAGGGCGCGTAAGATATTTACTTACGAGATTTCTTTTCTCATGATACAGATGTG
GATAGCTAAGGCAGAGTATGATGAATCTGGACCTTCAATCGTTCACAGGAAATGCTTCTAAATACAGCACGTCGAGTAAGAGATAAGTGAAGAAA
TATACAAACTTGCATTTCCAGAGCAGCTCCCTGTCGATTGGTTGCATATAATATGCTTCTCATTTGTATTTCCTTTTGATTTATTTTTGTTTCAA
TCTCAAATATTTGGTCATTGGTATGATTAAAAAAAAAGAAAGTCAATTTACCATTAATATTTTTATGTAGAAGAGTTGTATTTCAAAAATGTTGT
GATTTGGATTATGGATAAAAAGCTTTGTTGATTCATTTTATGTATACTTTTGGTCTCAATTTTTATGTACTCAAACTAAAAAACATTTTTCATTT
C
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E690406] | SGN-U591438 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T496932 [Download][View] | Facility Assigned ID: LH_Ea03G20.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
