Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E729190

Search information 
Request: 729190Match: SGN-E729190
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C502356Clone name: LA20BB01
cartOrder Clone
Library Name: LAOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Leaf
Development Stage: Mature leaves

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E729190Length: 640 bp (1366 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E729190 [] (trimmed) CGGCACGAGGCATAAATATAATTAAATACCAAAGAAAACGTATTGACTATATAGTTTTGCAGTAGAAAAAGACCCCATTATCATCAAATATTCAC
CAGAGCCTTAGTTTTTTCTCTGGCTTTGGGTTCAGACATGGCATCTTGCTGGAAGTTCTTATTCATATCCTTTGTTTTTCTTGCTGTAGTTGCTC
CTAAAGTCAAAGCAGATTCTGGGTCGGTGTTGGATGATGAAGATGAAGTGGTTAGATCGGATGTTCCTACTTCTCAGGAATTGGAGCATCTGAAG
TCCAAGATCCAATCTTTAGAATCAAACATTGAGGAGACTGCGCGAGCACTGAAAGGAAAGGATGAGGCGATTGCCGACAAAGAGAACATAATAAC
AGAAAAGTCAGAGAGGATTAAGTCATTGTCATCTGAATTGGCCTCTCTACAGAAAAAGGGAACGCTAGATTCTGAGGAGCAAGTTGGAAAGGCTC
GTGCACAAGCTGATCACCTTGAAAAGCAGGTTGAGAGATTAAAAGAGGAATCTGATATGAAAAATATGGAGAAAAGAGACTTCTAAGCGCATATA
GGTGAAACAGAGAAAAGAGTATCGGAGTTAAATTTGTAGGTCGAAAAGCTCGAAAAGACAGTTGAGAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E729190] SGN-U586071 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T528487 [Download][View] Facility Assigned ID: LA20BB01
Submitter: None Sequencing Facility: Kazusa1
Funding Organization: the Japanese Ministry of Agriculture, Forestry and Fisheries.
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0237 Quality Trim Threshold: 14.5