SGN Marker CD51
SGN-M162
Synonyms |
Locus associations |
RFLP details |
Insert size
450
|
Vector
pUC
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
CD51 image not available
|
Forward sequence
GAAAAGGGGATCGGAAACTTCCTCCCCGAGCTTAAACAAAAAAGATACATGAGGTGTCTCGCGGATGGAAATCTTCTGCTAACCAAGATC
CACAACATTGGTGCAACACTTGTTGGTGTGGATAAATTTGGTAACAAATATTATGAGAAGCTAGGCGATACACAATATGGAAAACACCCC CGGGGGGGGGATGCACAGAAAAATCATTACAATGCTTCACAAGTTCCACCACAATGGCATGGGTGGGTCCATCACGTCACTGATCACACT GGTGATGAACTGCTACTGCTGAAAC |
Reverse sequence
not available
|
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U146906 | 8.1e-42 | 105 (35.6% of RFLP seq) | + |
SGN-U146906 | 3.2e-78 | 178 (60.3% of RFLP seq) | + |
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| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
CD51 was used as an overgo probe on plate 14 [well D4]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CATCACGTCACTGATCACACTGGT
|
B sequence
GCAGTAGCAGTTCATCACCAGTGT
|
AB sequence
CATCACGTCACTGATCACACTGGTGATGAA
|
Marker sequence
GAAAAGGGGATCGGAAACTTCCTCCCCGAGCTTAAACAAAAAAGATACAT
GAGGTGTCTCGCGGATGGAAATCTTCTGCTAACCAAGATCCACAACATTG GTGCAACACTTGTTGGTGTGGATAAATTTGGTAACAAATATTATGAGAAG CTAGGCGATACACAATATGGAAAACACCCCCGGGGGGGGGATGCACAGAA AAATCATTACAATGCTTCACAAGTTCCACCACAATGGCATGGGTGGGTCC ATCACGTCACTGATCACACTGGTGATGAACTGCTACTGCTGAAAC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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