| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255556043|ref|XP_002519056.1| |
score: 272 |
e-value: 4e-71 |
Identity: 59.65% |
Span: 651bp (64.8%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223541719|gb|EEF43267.1| rnf5, putative [Ricinus communis] |
| Match: gi|225468785|ref|XP_002262822.1| |
score: 263 |
e-value: 3e-68 |
Identity: 58.33% |
Span: 651bp (64.8%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147810574|emb|CAN63097.1| hypothetical protein [Vitis vinifera] |
| Match: gi|224125502|ref|XP_002329821.1| |
score: 244 |
e-value: 1e-62 |
Identity: 55.31% |
Span: 651bp (64.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi118484396|gb|ABK94075.1| unknown [Populus trichocarpa] >gi|222870883|gb|EE... |
| Match: gi|22795037|gb|AAN05420.1| |
score: 243 |
e-value: 2e-62 |
Identity: 54.87% |
Span: 651bp (64.8%) |
Frame: 3 |
| putative RING protein [Populus tremula x Populus alba] |
| Match: gi|224077116|ref|XP_002305139.1| |
score: 241 |
e-value: 7e-62 |
Identity: 55.31% |
Span: 651bp (64.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222848103|gb|EEE85650.1| predicted protein [Populus trichocarpa] |
| Match: gi|255637671|gb|ACU19159.1| |
score: 233 |
e-value: 3e-59 |
Identity: 53.33% |
Span: 651bp (64.8%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|225446337|ref|XP_002272136.1| |
score: 211 |
e-value: 1e-52 |
Identity: 48.89% |
Span: 618bp (61.6%) |
Frame: 3 |
| PREDICTED: similar to ring domain containing protein isoform 2 [Vitis vinifera] >gi225446339|ref|XP_002272107.1| PRED... |
| Match: gi|225461411|ref|XP_002282248.1| |
score: 196 |
e-value: 5e-48 |
Identity: 47.03% |
Span: 624bp (62.2%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|224127182|ref|XP_002329420.1| |
score: 196 |
e-value: 5e-48 |
Identity: 48% |
Span: 621bp (61.9%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222870470|gb|EEF07601.1| predicted protein [Populus trichocarpa] |
| Match: gi|255635730|gb|ACU18214.1| |
score: 194 |
e-value: 1e-47 |
Identity: 47.25% |
Span: 636bp (63.3%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|217071982|gb|ACJ84351.1| |
score: 184 |
e-value: 1e-44 |
Identity: 47.16% |
Span: 651bp (64.8%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|255638201|gb|ACU19414.1| |
score: 182 |
e-value: 4e-44 |
Identity: 45.37% |
Span: 636bp (63.3%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|224121892|ref|XP_002330679.1| |
score: 182 |
e-value: 7e-44 |
Identity: 43.75% |
Span: 618bp (61.6%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222872283|gb|EEF09414.1| predicted protein [Populus trichocarpa] |
| Match: gi|255639433|gb|ACU20011.1| |
score: 180 |
e-value: 2e-43 |
Identity: 43.28% |
Span: 651bp (64.8%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|270230993|emb|CBI20320.1| |
score: 177 |
e-value: 1e-42 |
Identity: 44.81% |
Span: 624bp (62.2%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255573345|ref|XP_002527599.1| |
score: 176 |
e-value: 3e-42 |
Identity: 42.13% |
Span: 624bp (62.2%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223533016|gb|EEF34780.1| rnf5, putative [Ricinus communis] |
| Match: gi|224114956|ref|XP_002316902.1| |
score: 174 |
e-value: 1e-41 |
Identity: 43.56% |
Span: 624bp (62.2%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222859967|gb|EEE97514.1| predicted protein [Populus trichocarpa] |
| Match: gi|224128161|ref|XP_002329096.1| |
score: 174 |
e-value: 2e-41 |
Identity: 44.39% |
Span: 618bp (61.6%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222869765|gb|EEF06896.1| predicted protein [Populus trichocarpa] |
| Match: gi|41059804|gb|AAR99376.1| |
score: 171 |
e-value: 1e-40 |
Identity: 45.09% |
Span: 621bp (61.9%) |
Frame: 3 |
| ring domain containing protein [Capsicum annuum] |
| Match: gi|270238638|emb|CBI25895.1| |
score: 165 |
e-value: 9e-39 |
Identity: 57.14% |
Span: 390bp (38.8%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255553769|ref|XP_002517925.1| |
score: 165 |
e-value: 9e-39 |
Identity: 44.08% |
Span: 588bp (58.6%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223542907|gb|EEF44443.1| rnf5, putative [Ricinus communis] |
| Match: gi|30687607|ref|NP_194477.2| |
score: 161 |
e-value: 1e-37 |
Identity: 40.09% |
Span: 636bp (63.3%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi27311647|gb|AAO00789.1| putative RING z... |
| Match: gi|4972072|emb|CAB43879.1| |
score: 159 |
e-value: 6e-37 |
Identity: 40% |
Span: 630bp (62.7%) |
Frame: 3 |
| putative RING zinc finger protein [Arabidopsis thaliana] >gi7269601|emb|CAB81397.1| putative RING zinc finger protein... |
| Match: gi|15236326|ref|NP_192260.1| |
score: 155 |
e-value: 7e-36 |
Identity: 42.66% |
Span: 612bp (61.0%) |
Frame: 3 |
| RMA1; protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] >gi42572819|ref|NP_974506.1... |
| Match: gi|255640217|gb|ACU20399.1| |
score: 152 |
e-value: 4e-35 |
Identity: 42.6% |
Span: 609bp (60.7%) |
Frame: 3 |
| unknown [Glycine max] |
|
| 222 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At4G27470.1 |
score: 161 |
e-value: 5e-40 |
Identity: 40.09% |
Span: 636bp (63.3%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:13735582-13736313 FORWARD |
| Match: At4G03510.2 |
score: 155 |
e-value: 4e-38 |
Identity: 42.66% |
Span: 612bp (61.0%) |
Frame: 3 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At4G03510.1 |
score: 155 |
e-value: 4e-38 |
Identity: 42.66% |
Span: 612bp (61.0%) |
Frame: 3 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At4G28270.1 |
score: 116 |
e-value: 2e-26 |
Identity: 37.95% |
Span: 564bp (56.2%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:14007620-14008201 REVERSE |
| Match: At1G19310.1 |
score: 114 |
e-value: 7e-26 |
Identity: 50% |
Span: 330bp (32.9%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:6676415-6677095 REVERSE |
| Match: At1G74990.1 |
score: 108 |
e-value: 5e-24 |
Identity: 50.51% |
Span: 291bp (29.0%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:28163498-28163911 REVERSE |
| Match: At2G23780.1 |
score: 107 |
e-value: 9e-24 |
Identity: 39.2% |
Span: 375bp (37.4%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:10130631-10131314 REVERSE |
| Match: At2G42030.1 |
score: 104 |
e-value: 1e-22 |
Identity: 39.57% |
Span: 417bp (41.5%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:17546147-17547424 REVERSE |
| Match: At3G58030.3 |
score: 102 |
e-value: 5e-22 |
Identity: 44.35% |
Span: 333bp (33.2%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.2 |
score: 102 |
e-value: 5e-22 |
Identity: 44.35% |
Span: 333bp (33.2%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.1 |
score: 102 |
e-value: 5e-22 |
Identity: 44.35% |
Span: 333bp (33.2%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At2G44410.1 |
score: 82.8 |
e-value: 3e-16 |
Identity: 36.28% |
Span: 324bp (32.3%) |
Frame: 3 |
| protein binding / zinc ion binding | chr2:18335949-18337190 FORWARD |
|
| swissprot [blastx] | Showing best 10 hits recorded |
| Match: Q5M807 |
score: 103 |
e-value: 2e-21 |
Identity: 48.08% |
Span: 306bp (30.5%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1 |
| Match: O35445 |
score: 103 |
e-value: 2e-21 |
Identity: 48.08% |
Span: 306bp (30.5%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1 |
| Match: Q99942 |
score: 102 |
e-value: 6e-21 |
Identity: 47.12% |
Span: 306bp (30.5%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1 |
| Match: Q09463 |
score: 95.9 |
e-value: 4e-19 |
Identity: 49% |
Span: 291bp (29.0%) |
Frame: 3 |
| RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1 |
| Match: Q568Y3 |
score: 94.7 |
e-value: 9e-19 |
Identity: 44.66% |
Span: 309bp (30.8%) |
Frame: 3 |
| RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1 |
| Match: Q91YT2 |
score: 94.7 |
e-value: 9e-19 |
Identity: 44.66% |
Span: 309bp (30.8%) |
Frame: 3 |
| RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1 |
| Match: Q5ZIR9 |
score: 94.4 |
e-value: 1e-18 |
Identity: 43% |
Span: 300bp (29.9%) |
Frame: 3 |
| RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1 |
| Match: Q5RFK9 |
score: 94 |
e-value: 1e-18 |
Identity: 43% |
Span: 300bp (29.9%) |
Frame: 3 |
| RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1 |
| Match: Q96GF1 |
score: 94 |
e-value: 1e-18 |
Identity: 43% |
Span: 300bp (29.9%) |
Frame: 3 |
| RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1 |
| Match: Q6PC78 |
score: 93.6 |
e-value: 2e-18 |
Identity: 42.57% |
Span: 303bp (30.2%) |
Frame: 3 |
| RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1 |
|
