| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|121631|sp|P27484|GRP2_NICSY |
score: 134 |
e-value: 1e-29 |
Identity: 79.01% |
Span: 243bp (24.2%) |
Frame: 1 |
| gi|121631|sp|P27484|GRP2_NICSY Glycine-rich protein 2 gi|72323|pir||KNNT2S glycine-rich protein 2 - wood tobacco gi|1... |
| Match: gi|194705650|gb|ACF86909.1| |
score: 114 |
e-value: 1e-23 |
Identity: 65.48% |
Span: 249bp (24.8%) |
Frame: 1 |
| unknown |
| Match: gi|194699220|gb|ACF83694.1| |
score: 114 |
e-value: 1e-23 |
Identity: 70.27% |
Span: 222bp (22.1%) |
Frame: 1 |
| unknown |
| Match: gi|147856673|emb|CAN81359.1| |
score: 112 |
e-value: 5e-23 |
Identity: 75.36% |
Span: 207bp (20.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157340552|emb|CAO47357.1| |
score: 112 |
e-value: 5e-23 |
Identity: 75.36% |
Span: 207bp (20.6%) |
Frame: 1 |
| unnamed |
| Match: gi|157354859|emb|CAO48205.1| |
score: 109 |
e-value: 4e-22 |
Identity: 72.86% |
Span: 210bp (20.9%) |
Frame: 1 |
| unnamed |
| Match: gi|147791391|emb|CAN59784.1| |
score: 109 |
e-value: 4e-22 |
Identity: 68.92% |
Span: 222bp (22.1%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|218189944|gb|EEC72371.1| |
score: 109 |
e-value: 4e-22 |
Identity: 68.92% |
Span: 222bp (22.1%) |
Frame: 1 |
| hypothetical protein OsI_05633 [Oryza sativa Indica Group] |
| Match: gi|115443871|ref|NP_001045715.1| |
score: 109 |
e-value: 4e-22 |
Identity: 68.92% |
Span: 222bp (22.1%) |
Frame: 1 |
| Os02g0121100 [Oryza sativa (japonica cultivar-group)] >gi41052630|dbj|BAD08139.1| putative Glycine-rich protein 2 [Or... |
| Match: gi|15226451|ref|NP_179702.1| |
score: 105 |
e-value: 6e-21 |
Identity: 64.94% |
Span: 231bp (23.0%) |
Frame: 1 |
| ATGRP2B (GLYCINE-RICH PROTEIN 2B); DNA binding / nucleic acid binding / zinc ion binding [Arabidopsis thaliana] >gi17... |
| Match: gi|21322752|dbj|BAB78536.2| |
score: 105 |
e-value: 6e-21 |
Identity: 64.86% |
Span: 222bp (22.1%) |
Frame: 1 |
| cold shock protein-1 [Triticum aestivum] |
| Match: gi|159476838|ref|XP_001696518.1| |
score: 104 |
e-value: 1e-20 |
Identity: 68.06% |
Span: 216bp (21.5%) |
Frame: 1 |
| nucleic |
| Match: gi|195609518|gb|ACG26589.1| |
score: 104 |
e-value: 1e-20 |
Identity: 69.57% |
Span: 207bp (20.6%) |
Frame: 1 |
| glycine-rich protein 2b [Zea mays] |
| Match: gi|195638850|gb|ACG38893.1| |
score: 104 |
e-value: 1e-20 |
Identity: 69.57% |
Span: 207bp (20.6%) |
Frame: 1 |
| glycine-rich |
| Match: gi|74272681|gb|ABA01136.1| |
score: 104 |
e-value: 1e-20 |
Identity: 68.06% |
Span: 216bp (21.5%) |
Frame: 1 |
| putative |
| Match: gi|125560025|gb|EAZ05473.1| |
score: 103 |
e-value: 2e-20 |
Identity: 63.51% |
Span: 222bp (22.1%) |
Frame: 1 |
| hypothetical protein OsI_27689 [Oryza sativa Indica Group] |
| Match: gi|40363759|dbj|BAD06324.1| |
score: 103 |
e-value: 2e-20 |
Identity: 63.51% |
Span: 222bp (22.1%) |
Frame: 1 |
| gi|40363759|dbj|BAD06324.1| putative glycine-rich protein [Triticum aestivum] >gi|42391853|dbj|BAD08700.1| cold shock... |
| Match: gi|15234010|ref|NP_195580.1| |
score: 103 |
e-value: 2e-20 |
Identity: 64.94% |
Span: 231bp (23.0%) |
Frame: 1 |
| GRP2 (GLYCINE RICH PROTEIN 2); double-stranded DNA binding / mRNA binding / nucleic acid binding / single-stranded DN... |
| Match: gi|115474635|ref|NP_001060914.1| |
score: 103 |
e-value: 2e-20 |
Identity: 63.51% |
Span: 222bp (22.1%) |
Frame: 1 |
| Os08g0129200 |
| Match: gi|42391858|dbj|BAD08701.1| |
score: 103 |
e-value: 2e-20 |
Identity: 64.86% |
Span: 222bp (22.1%) |
Frame: 1 |
| gi|42391858|dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum] |
| Match: gi|195648068|gb|ACG43502.1| |
score: 102 |
e-value: 5e-20 |
Identity: 68.12% |
Span: 207bp (20.6%) |
Frame: 1 |
| glycine-rich protein 2b [Zea mays] |
| Match: gi|125602074|gb|EAZ41399.1| |
score: 102 |
e-value: 5e-20 |
Identity: 63.51% |
Span: 222bp (22.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|76577745|gb|ABA54143.1| |
score: 100 |
e-value: 3e-19 |
Identity: 67.61% |
Span: 213bp (21.2%) |
Frame: 1 |
| putative glycine-rich protein [Picea glauca] |
| Match: gi|116781927|gb|ABK22299.1| |
score: 100 |
e-value: 3e-19 |
Identity: 67.61% |
Span: 213bp (21.2%) |
Frame: 1 |
| unknown |
| Match: gi|121077603|gb|ABM47305.1| |
score: 99.4 |
e-value: 4e-19 |
Identity: 62.5% |
Span: 216bp (21.5%) |
Frame: 1 |
| nucleic |
| Match: gi|147812546|emb|CAN68380.1| |
score: 99.4 |
e-value: 4e-19 |
Identity: 67.16% |
Span: 201bp (20.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157335987|emb|CAO61817.1| |
score: 99.4 |
e-value: 4e-19 |
Identity: 67.16% |
Span: 201bp (20.0%) |
Frame: 1 |
| unnamed |
| Match: gi|168022724|ref|XP_001763889.1| |
score: 99 |
e-value: 6e-19 |
Identity: 58.14% |
Span: 243bp (24.2%) |
Frame: 1 |
| predicted |
| Match: gi|66359918|ref|XP_627137.1| |
score: 99 |
e-value: 6e-19 |
Identity: 64.38% |
Span: 219bp (21.8%) |
Frame: 1 |
| cold |
| Match: gi|67602636|ref|XP_666494.1| |
score: 99 |
e-value: 6e-19 |
Identity: 64.38% |
Span: 219bp (21.8%) |
Frame: 1 |
| glycogen |
| Match: gi|168031977|ref|XP_001768496.1| |
score: 98.6 |
e-value: 7e-19 |
Identity: 66.2% |
Span: 213bp (21.2%) |
Frame: 1 |
| predicted |
| Match: gi|2708747|gb|AAD03571.1| |
score: 98.2 |
e-value: 1e-18 |
Identity: 62.67% |
Span: 225bp (22.4%) |
Frame: 1 |
| putative |
| Match: gi|18398546|ref|NP_565427.1| |
score: 98.2 |
e-value: 1e-18 |
Identity: 62.67% |
Span: 225bp (22.4%) |
Frame: 1 |
| cold-shock DNA-binding family protein [Arabidopsis thaliana] >gi14334920|gb|AAK59638.1| putative glycine-rich, zinc-f... |
| Match: gi|168015213|ref|XP_001760145.1| |
score: 97.4 |
e-value: 2e-18 |
Identity: 64.79% |
Span: 213bp (21.2%) |
Frame: 1 |
| predicted |
| Match: gi|209877068|ref|XP_002139976.1| |
score: 97.1 |
e-value: 2e-18 |
Identity: 63.38% |
Span: 213bp (21.2%) |
Frame: 1 |
| cold-shock |
| Match: gi|148234211|ref|NP_001091131.1| |
score: 96.3 |
e-value: 4e-18 |
Identity: 61.33% |
Span: 222bp (22.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|125602073|gb|EAZ41398.1| |
score: 96.3 |
e-value: 4e-18 |
Identity: 66.15% |
Span: 195bp (19.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|219125932|ref|XP_002183223.1| |
score: 95.5 |
e-value: 6e-18 |
Identity: 62.5% |
Span: 216bp (21.5%) |
Frame: 1 |
| predicted |
| Match: gi|193875878|gb|ACF24575.1| |
score: 94 |
e-value: 2e-17 |
Identity: 56% |
Span: 225bp (22.4%) |
Frame: 1 |
| glycine-rich |
| Match: gi|145356187|ref|XP_001422318.1| |
score: 93.6 |
e-value: 2e-17 |
Identity: 63.89% |
Span: 216bp (21.5%) |
Frame: 1 |
| predicted |
| Match: gi|15233440|ref|NP_195326.1| |
score: 90.9 |
e-value: 2e-16 |
Identity: 54.43% |
Span: 237bp (23.6%) |
Frame: 1 |
| CSDP1 (cold shock domain protein 1); RNA binding / double-stranded DNA binding / nucleic acid binding / single-strand... |
| Match: gi|219119929|ref|XP_002180715.1| |
score: 89.4 |
e-value: 4e-16 |
Identity: 64.62% |
Span: 195bp (19.4%) |
Frame: 1 |
| predicted |
| Match: gi|37526673|ref|NP_930017.1| |
score: 88.6 |
e-value: 8e-16 |
Identity: 60.32% |
Span: 189bp (18.8%) |
Frame: 1 |
| gi|37526673|ref|NP_930017.1| cold shock protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786105|emb|CAE1... |
| Match: gi|37525773|ref|NP_929117.1| |
score: 88.6 |
e-value: 8e-16 |
Identity: 59.38% |
Span: 192bp (19.1%) |
Frame: 1 |
| gi|37525773|ref|NP_929117.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785202|emb|CA... |
| Match: gi|145347619|ref|XP_001418260.1| |
score: 88.6 |
e-value: 8e-16 |
Identity: 58.11% |
Span: 222bp (22.1%) |
Frame: 1 |
| predicted |
| Match: gi|197285535|ref|YP_002151407.1| |
score: 88.6 |
e-value: 8e-16 |
Identity: 59.38% |
Span: 192bp (19.1%) |
Frame: 1 |
| cold |
| Match: gi|212708264|ref|ZP_03316392.1| |
score: 88.2 |
e-value: 1e-15 |
Identity: 59.38% |
Span: 192bp (19.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|211967581|gb|EEB02777.1| |
score: 88.2 |
e-value: 1e-15 |
Identity: 59.7% |
Span: 201bp (20.0%) |
Frame: 1 |
| glycine-rich |
| Match: gi|188025849|ref|ZP_02960049.2| |
score: 87.8 |
e-value: 1e-15 |
Identity: 59.38% |
Span: 192bp (19.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|156933606|ref|YP_001437522.1| |
score: 87.4 |
e-value: 2e-15 |
Identity: 53.25% |
Span: 225bp (22.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|77976903|ref|ZP_00832369.1| |
score: 85.9 |
e-value: 5e-15 |
Identity: 58.06% |
Span: 186bp (18.5%) |
Frame: 1 |
| COG1278: |
| Match: gi|45441597|ref|NP_993136.1| |
score: 85.9 |
e-value: 5e-15 |
Identity: 58.06% |
Span: 186bp (18.5%) |
Frame: 1 |
| cold |
| Match: gi|157371292|ref|YP_001479281.1| |
score: 85.9 |
e-value: 5e-15 |
Identity: 58.06% |
Span: 186bp (18.5%) |
Frame: 1 |
| cold-shock |
| Match: gi|125526345|gb|EAY74459.1| |
score: 85.5 |
e-value: 6e-15 |
Identity: 54.79% |
Span: 219bp (21.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|15802236|ref|NP_288259.1| |
score: 85.5 |
e-value: 6e-15 |
Identity: 60% |
Span: 180bp (17.9%) |
Frame: 1 |
| gi|15802236|ref|NP_288259.1| cold shock protein [Escherichia coli O157:H7 EDL933] gi|15831787|ref|NP_310560.1| cold s... |
| Match: gi|116515229|ref|YP_802858.1| |
score: 85.5 |
e-value: 6e-15 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| CspE |
| Match: gi|197284318|ref|YP_002150190.1| |
score: 85.1 |
e-value: 8e-15 |
Identity: 58.46% |
Span: 195bp (19.4%) |
Frame: 1 |
| cold |
| Match: gi|15617086|ref|NP_240299.1| |
score: 85.1 |
e-value: 8e-15 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| gi|15617086|ref|NP_240299.1| cold shock-like protein cspE [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|216... |
| Match: gi|197284696|ref|YP_002150568.1| |
score: 84.7 |
e-value: 1e-14 |
Identity: 59.68% |
Span: 186bp (18.5%) |
Frame: 1 |
| cold |
| Match: gi|188534489|ref|YP_001908286.1| |
score: 84.7 |
e-value: 1e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| Putative |
| Match: gi|45441309|ref|NP_992848.1| |
score: 84.7 |
e-value: 1e-14 |
Identity: 60.34% |
Span: 174bp (17.3%) |
Frame: 1 |
| cold |
| Match: gi|123443227|ref|YP_001007201.1| |
score: 84.7 |
e-value: 1e-14 |
Identity: 58.73% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|50121319|ref|YP_050486.1| |
score: 84.7 |
e-value: 1e-14 |
Identity: 60.34% |
Span: 174bp (17.3%) |
Frame: 1 |
| cold |
| Match: gi|188025725|ref|ZP_02959593.2| |
score: 84.3 |
e-value: 1e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|206579703|ref|YP_002239721.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|209907107|ref|ZP_03281591.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|152969227|ref|YP_001334336.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|74095589|emb|CAJ27355.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| strongly |
| Match: gi|50120233|ref|YP_049400.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|32490926|ref|NP_871180.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| gi|32490926|ref|NP_871180.1| cspE [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166132|dbj|B... |
| Match: gi|21957922|gb|AAM84743.1|AE013720_7 |
score: 84 |
e-value: 2e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|51595435|ref|YP_069626.1| |
score: 84 |
e-value: 2e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|94676996|ref|YP_588711.1| |
score: 84 |
e-value: 2e-14 |
Identity: 58.06% |
Span: 186bp (18.5%) |
Frame: 1 |
| cold |
| Match: gi|27904911|ref|NP_778037.1| |
score: 84 |
e-value: 2e-14 |
Identity: 53.03% |
Span: 198bp (19.7%) |
Frame: 1 |
| gi|27904911|ref|NP_778037.1| cold shock protein CspA [Buchnera aphidicola (Baizongia pistaciae)] gi|38372204|sp|Q89A9... |
| Match: gi|77973021|ref|ZP_00828574.1| |
score: 83.6 |
e-value: 2e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| COG1278: |
| Match: gi|157369432|ref|YP_001477421.1| |
score: 83.6 |
e-value: 2e-14 |
Identity: 57.14% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold-shock |
| Match: gi|110804727|ref|YP_688247.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|91209672|ref|YP_539658.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|24112787|ref|NP_707297.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 58.33% |
Span: 180bp (17.9%) |
Frame: 1 |
| gi|24112787|ref|NP_707297.1| cold shock protein [Shigella flexneri 2a str. 301] gi|33301070|sp|Q83RI9|CSPC_SHIFL Cold... |
| Match: gi|16759589|ref|NP_455206.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| gi|16759589|ref|NP_455206.1| cold shock-like protein cspE [Salmonella enterica subsp. enterica serovar Typhi] gi|1676... |
| Match: gi|125570752|gb|EAZ12267.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 53.42% |
Span: 219bp (21.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|212707888|ref|ZP_03316016.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|62126861|gb|AAX64564.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| RNA |
| Match: gi|15800338|ref|NP_286350.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| gi|15800338|ref|NP_286350.1| cold shock protein [Escherichia coli O157:H7 EDL933] gi|15829916|ref|NP_308689.1| cold s... |
| Match: gi|1778540|gb|AAB40823.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| gi|1778540|gb|AAB40823.1| cold shock-like protein [Escherichia coli] |
| Match: gi|212712933|ref|ZP_03321061.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|57900030|dbj|BAD88072.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 53.42% |
Span: 219bp (21.8%) |
Frame: 1 |
| cold |
| Match: gi|207856095|ref|YP_002242746.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|157146760|ref|YP_001454079.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|2970685|gb|AAC06037.1| |
score: 82.8 |
e-value: 4e-14 |
Identity: 58.33% |
Span: 180bp (17.9%) |
Frame: 1 |
| gi|2970685|gb|AAC06037.1| cold shock protein C [Salmonella typhimurium] |
| Match: gi|33519902|ref|NP_878734.1| |
score: 82.8 |
e-value: 4e-14 |
Identity: 56.9% |
Span: 174bp (17.3%) |
Frame: 1 |
| gi|33519902|ref|NP_878734.1| cold shock-like protein CspC [Candidatus Blochmannia floridanus] gi|33504247|emb|CAD8351... |
| Match: gi|15616931|ref|NP_240144.1| |
score: 82.8 |
e-value: 4e-14 |
Identity: 56.67% |
Span: 180bp (17.9%) |
Frame: 1 |
| gi|15616931|ref|NP_240144.1| cold shock-like protein CspC [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|111... |
| Match: gi|212707068|ref|ZP_03315196.1| |
score: 82.4 |
e-value: 5e-14 |
Identity: 57.81% |
Span: 192bp (19.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|91805295|gb|ABE65379.1| |
score: 82.4 |
e-value: 5e-14 |
Identity: 58.33% |
Span: 180bp (17.9%) |
Frame: 1 |
| CspC |
| Match: gi|28199264|ref|NP_779578.1| |
score: 82 |
e-value: 7e-14 |
Identity: 61.9% |
Span: 189bp (18.8%) |
Frame: 1 |
| cold |
| Match: gi|71892224|ref|YP_277957.1| |
score: 81.6 |
e-value: 9e-14 |
Identity: 56.9% |
Span: 174bp (17.3%) |
Frame: 1 |
| cold |
| Match: gi|197284798|ref|YP_002150670.1| |
score: 81.6 |
e-value: 9e-14 |
Identity: 56.25% |
Span: 192bp (19.1%) |
Frame: 1 |
| cold |
| Match: gi|91783753|ref|YP_558959.1| |
score: 81.6 |
e-value: 9e-14 |
Identity: 61.29% |
Span: 186bp (18.5%) |
Frame: 1 |
| Putative |
| Match: gi|170696311|ref|ZP_02887442.1| |
score: 81.3 |
e-value: 1e-13 |
Identity: 59.68% |
Span: 186bp (18.5%) |
Frame: 1 |
| cold-shock |
| Match: gi|156934364|ref|YP_001438280.1| |
score: 81.3 |
e-value: 1e-13 |
Identity: 58.62% |
Span: 174bp (17.3%) |
Frame: 1 |
| hypothetical |
|
| 150 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At2G21060.1 |
score: 105 |
e-value: 4e-23 |
Identity: 64.94% |
Span: 231bp (23.0%) |
Frame: 1 |
| Symbols: ATGRP2B | ATGRP2B (GLYCINE-RICH PROTEIN 2B); nucleic acid binding | chr2:9044064-9044669 REVERSE |
| Match: At4G38680.1 |
score: 103 |
e-value: 2e-22 |
Identity: 64.94% |
Span: 231bp (23.0%) |
Frame: 1 |
| Symbols: CSDP2, GRP2 | GRP2 (COLD SHOCK DOMAIN PROTEIN 2); nucleic acid binding | chr4:18072234-18072845 REVERSE |
| Match: At2G17870.1 |
score: 98.2 |
e-value: 7e-21 |
Identity: 62.67% |
Span: 225bp (22.4%) |
Frame: 1 |
| cold-shock DNA-binding family protein | chr2:7771358-7772263 REVERSE |
| Match: At4G36020.1 |
score: 90.9 |
e-value: 1e-18 |
Identity: 54.43% |
Span: 237bp (23.6%) |
Frame: 1 |
| Symbols: CSDP1 | CSDP1 (COLD SHOCK DOMAIN PROTEIN 1); nucleic acid binding | chr4:17043446-17044345 REVERSE |
|
| swissprot [blastx] | Showing best 55 hits recorded |
| Match: P27484 |
score: 134 |
e-value: 8e-31 |
Identity: 79.01% |
Span: 243bp (24.2%) |
Frame: 1 |
| Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1 |
| Match: Q38896 |
score: 105 |
e-value: 4e-22 |
Identity: 64.94% |
Span: 231bp (23.0%) |
Frame: 1 |
| Glycine-rich protein 2b OS=Arabidopsis thaliana GN=GRP2B PE=2 SV=1 |
| Match: P0A9Y8 |
score: 85.5 |
e-value: 4e-16 |
Identity: 60% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspC OS=Escherichia coli O157:H7 GN=cspC PE=3 SV=2 |
| Match: P0A9Y9 |
score: 85.5 |
e-value: 4e-16 |
Identity: 60% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspC OS=Salmonella typhimurium GN=cspC PE=3 SV=2 |
| Match: P0A9Z0 |
score: 85.5 |
e-value: 4e-16 |
Identity: 60% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspC OS=Salmonella typhi GN=cspC PE=3 SV=2 |
| Match: P0A9Y6 |
score: 85.5 |
e-value: 4e-16 |
Identity: 60% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspC OS=Escherichia coli (strain K12) GN=cspC PE=1 SV=2 |
| Match: P0A9Y7 |
score: 85.5 |
e-value: 4e-16 |
Identity: 60% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspC OS=Escherichia coli O6 GN=cspC PE=3 SV=2 |
| Match: P63238 |
score: 85.1 |
e-value: 6e-16 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock-like protein cspE OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cspE PE=3 SV=2 |
| Match: P63237 |
score: 85.1 |
e-value: 6e-16 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock-like protein cspE OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cspE PE=3 SV=2 |
| Match: Q89A90 |
score: 84 |
e-value: 1e-15 |
Identity: 53.03% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock-like protein cspE OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=cspE PE=3 SV=3 |
| Match: P0A973 |
score: 83.2 |
e-value: 2e-15 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| Cold shock-like protein cspE OS=Escherichia coli O6 GN=cspE PE=3 SV=2 |
| Match: P0A972 |
score: 83.2 |
e-value: 2e-15 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| Cold shock-like protein cspE OS=Escherichia coli (strain K12) GN=cspE PE=1 SV=2 |
| Match: P0A975 |
score: 83.2 |
e-value: 2e-15 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| Cold shock-like protein cspE OS=Shigella flexneri GN=cspE PE=3 SV=2 |
| Match: Q83RI9 |
score: 83.2 |
e-value: 2e-15 |
Identity: 58.33% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspC OS=Shigella flexneri GN=cspC |
| Match: P0A974 |
score: 83.2 |
e-value: 2e-15 |
Identity: 55.56% |
Span: 189bp (18.8%) |
Frame: 1 |
| Cold shock-like protein cspE OS=Escherichia coli O157:H7 GN=cspE PE=3 SV=2 |
| Match: P57407 |
score: 82.8 |
e-value: 3e-15 |
Identity: 56.67% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspC OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cspC |
| Match: P0A9Y5 |
score: 78.2 |
e-value: 7e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock protein cspA OS=Salmonella enteritidis GN=cspA PE=2 SV=2 |
| Match: P0A9Y3 |
score: 78.2 |
e-value: 7e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock protein cspA OS=Salmonella typhi GN=cspA PE=2 SV=2 |
| Match: P0A9X9 |
score: 78.2 |
e-value: 7e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock protein cspA OS=Escherichia coli (strain K12) GN=cspA PE=1 SV=2 |
| Match: P0A9Y1 |
score: 78.2 |
e-value: 7e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock protein cspA OS=Escherichia coli O157:H7 GN=cspA PE=2 SV=2 |
| Match: P0A9Y0 |
score: 78.2 |
e-value: 7e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock protein cspA OS=Escherichia coli O6 GN=cspA PE=2 SV=2 |
| Match: P0A9Y2 |
score: 78.2 |
e-value: 7e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock protein cspA OS=Salmonella typhimurium GN=cspA PE=2 SV=2 |
| Match: P0A9Y4 |
score: 78.2 |
e-value: 7e-14 |
Identity: 56.06% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock protein cspA OS=Shigella flexneri GN=cspA PE=2 SV=2 |
| Match: P72188 |
score: 77.8 |
e-value: 9e-14 |
Identity: 57.63% |
Span: 177bp (17.6%) |
Frame: 1 |
| Cold shock protein capA (Fragment) OS=Pseudomonas fragi GN=capA PE=2 SV=1 |
| Match: P0A979 |
score: 76.3 |
e-value: 3e-13 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock-like protein cspG OS=Escherichia coli O6 GN=cspG |
| Match: P0A980 |
score: 76.3 |
e-value: 3e-13 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock-like protein cspG OS=Escherichia coli O157:H7 GN=cspG |
| Match: P0A981 |
score: 76.3 |
e-value: 3e-13 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock-like protein cspG OS=Shigella flexneri GN=cspG |
| Match: P0A978 |
score: 76.3 |
e-value: 3e-13 |
Identity: 54.55% |
Span: 198bp (19.7%) |
Frame: 1 |
| Cold shock-like protein cspG OS=Escherichia coli (strain K12) GN=cspG |
| Match: P0A986 |
score: 75.9 |
e-value: 3e-13 |
Identity: 55% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspI OS=Escherichia coli (strain K12) GN=cspI PE=3 SV=1 |
| Match: P36995 |
score: 75.9 |
e-value: 3e-13 |
Identity: 52.38% |
Span: 189bp (18.8%) |
Frame: 1 |
| Cold shock-like protein cspB OS=Escherichia coli (strain K12) GN=cspB PE=2 SV=1 |
| Match: P0A987 |
score: 75.9 |
e-value: 3e-13 |
Identity: 55% |
Span: 180bp (17.9%) |
Frame: 1 |
| Cold shock-like protein cspI OS=Escherichia coli O6 GN=cspI PE=3 SV=1 |
| Match: P39818 |
score: 75.1 |
e-value: 6e-13 |
Identity: 55.17% |
Span: 174bp (17.3%) |
Frame: 1 |
| Cold shock-like protein cspJ OS=Salmonella typhimurium GN=cspJ PE=2 SV=2 |
| Match: P58726 |
score: 73.6 |
e-value: 2e-12 |
Identity: 55.17% |
Span: 174bp (17.3%) |
Frame: 1 |
| Cold shock-like protein cspJ OS=Salmonella typhi GN=cspJ PE=3 SV=1 |
| Match: P0A362 |
score: 72.4 |
e-value: 4e-12 |
Identity: 53.45% |
Span: 174bp (17.3%) |
Frame: 1 |
| Cold shock-like protein cspB OS=Yersinia pestis GN=cspB |
| Match: P0A363 |
score: 72.4 |
e-value: 4e-12 |
Identity: 53.45% |
Span: 174bp (17.3%) |
Frame: 1 |
| Cold shock-like protein cspB OS=Yersinia enterocolitica GN=cspB |
| Match: Q9S170 |
score: 72 |
e-value: 5e-12 |
Identity: 50% |
Span: 186bp (18.5%) |
Frame: 1 |
| Cold shock-like protein cspG OS=Shewanella violacea GN=cspG |
| Match: P72366 |
score: 72 |
e-value: 5e-12 |
Identity: 56.36% |
Span: 165bp (16.4%) |
Frame: 1 |
| Cold shock-like protein cspA OS=Stigmatella aurantiaca GN=cspA PE=3 SV=1 |
| Match: Q9KL16 |
score: 71.2 |
e-value: 8e-12 |
Identity: 49.23% |
Span: 195bp (19.4%) |
Frame: 1 |
| Cold shock protein cspV OS=Vibrio cholerae GN=cspV |
| Match: P0A970 |
score: 71.2 |
e-value: 8e-12 |
Identity: 46.48% |
Span: 213bp (21.2%) |
Frame: 1 |
| Cold shock-like protein cspD OS=Escherichia coli O157:H7 GN=cspD |
| Match: P0A968 |
score: 71.2 |
e-value: 8e-12 |
Identity: 46.48% |
Span: 213bp (21.2%) |
Frame: 1 |
| Cold shock-like protein cspD OS=Escherichia coli (strain K12) GN=cspD |
| Match: P0A971 |
score: 71.2 |
e-value: 8e-12 |
Identity: 46.48% |
Span: 213bp (21.2%) |
Frame: 1 |
| Cold shock-like protein cspD OS=Shigella flexneri GN=cspD |
| Match: P0A969 |
score: 71.2 |
e-value: 8e-12 |
Identity: 46.48% |
Span: 213bp (21.2%) |
Frame: 1 |
| Cold shock-like protein cspD OS=Escherichia coli O6 GN=cspD |
| Match: Q9KN00 |
score: 71.2 |
e-value: 8e-12 |
Identity: 47.76% |
Span: 201bp (20.0%) |
Frame: 1 |
| Cold shock-like protein cspA OS=Vibrio cholerae GN=cspA |
| Match: P0A105 |
score: 70.1 |
e-value: 2e-11 |
Identity: 56.9% |
Span: 174bp (17.3%) |
Frame: 1 |
| Cold shock protein capB OS=Pseudomonas syringae pv. tomato GN=capB |
| Match: P0A106 |
score: 70.1 |
e-value: 2e-11 |
Identity: 56.9% |
Span: 174bp (17.3%) |
Frame: 1 |
| Cold shock protein capB OS=Pseudomonas fragi GN=capB |
| Match: Q9VRN5 |
score: 69.7 |
e-value: 2e-11 |
Identity: 54.1% |
Span: 183bp (18.2%) |
Frame: 1 |
| Lin-28 homolog OS=Drosophila melanogaster GN=lin-28 |
| Match: Q9S1B7 |
score: 69.3 |
e-value: 3e-11 |
Identity: 51.61% |
Span: 186bp (18.5%) |
Frame: 1 |
| Cold shock-like protein cspA OS=Shewanella violacea GN=cspA |
| Match: P63849 |
score: 68.6 |
e-value: 5e-11 |
Identity: 53.57% |
Span: 168bp (16.7%) |
Frame: 1 |
| Probable cold shock protein A OS=Mycobacterium bovis GN=cspA |
| Match: P63848 |
score: 68.6 |
e-value: 5e-11 |
Identity: 53.57% |
Span: 168bp (16.7%) |
Frame: 1 |
| Probable cold shock protein A OS=Mycobacterium tuberculosis GN=cspA |
| Match: Q81DK5 |
score: 68.6 |
e-value: 5e-11 |
Identity: 54.39% |
Span: 171bp (17.0%) |
Frame: 1 |
| Cold shock-like protein cspE OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cspE |
| Match: P45441 |
score: 68.6 |
e-value: 5e-11 |
Identity: 43.59% |
Span: 222bp (22.1%) |
Frame: 1 |
| Y-box-binding protein 2-B OS=Xenopus laevis GN=ybx2-B |
| Match: Q61CX7 |
score: 68.2 |
e-value: 7e-11 |
Identity: 50.82% |
Span: 183bp (18.2%) |
Frame: 1 |
| Protein lin-28 OS=Caenorhabditis briggsae GN=lin-28 |
| Match: P21574 |
score: 67.8 |
e-value: 9e-11 |
Identity: 43.59% |
Span: 222bp (22.1%) |
Frame: 1 |
| Y-box-binding protein 2-A OS=Xenopus laevis GN=ybx2-A |
| Match: P95459 |
score: 67.8 |
e-value: 9e-11 |
Identity: 55.17% |
Span: 174bp (17.3%) |
Frame: 1 |
| Major cold shock protein cspA OS=Pseudomonas aeruginosa GN=cspA |
| Match: O30875 |
score: 67.8 |
e-value: 9e-11 |
Identity: 49.21% |
Span: 189bp (18.8%) |
Frame: 1 |
| Major cold shock protein OS=Micrococcus luteus GN=cspA |
|
