All Stored BLAST annotations for SGN-U323172
arabidopsis/peptide [blastx] Showing best 7 hits recorded
Match: At2G17870.1 score: 111 e-value: 8e-25 Identity: 42.86% Span: 570bp (56.5%) Frame: 2
cold-shock DNA-binding family protein | chr2:7771358-7772263 REVERSE
Match: At4G36020.1 score: 104 e-value: 1e-22 Identity: 44.12% Span: 651bp (64.6%) Frame: 2
Symbols: CSDP1 | CSDP1 (COLD SHOCK DOMAIN PROTEIN 1); nucleic acid binding | chr4:17043446-17044345 REVERSE
Match: At4G38680.1 score: 91.7 e-value: 6e-19 Identity: 45.19% Span: 381bp (37.8%) Frame: 2
Symbols: CSDP2, GRP2 | GRP2 (COLD SHOCK DOMAIN PROTEIN 2); nucleic acid binding | chr4:18072234-18072845 REVERSE
Match: At2G21060.1 score: 86.3 e-value: 3e-17 Identity: 42.05% Span: 552bp (54.8%) Frame: 2
Symbols: ATGRP2B | ATGRP2B (GLYCINE-RICH PROTEIN 2B); nucleic acid binding | chr2:9044064-9044669 REVERSE
Match: At4G36020.1 score: 48.9 e-value: 5e-06 Identity: 48.65% Span: 222bp (22.0%) Frame: 2
Symbols: CSDP1 | CSDP1 (COLD SHOCK DOMAIN PROTEIN 1); nucleic acid binding | chr4:17043446-17044345 REVERSE
Match: At2G17870.1 score: 43.1 e-value: 7e-05 Identity: 49.51% Span: 306bp (30.4%) Frame: 2
cold-shock DNA-binding family protein | chr2:7771358-7772263 REVERSE
Match: At2G17870.1 score: 21.2 e-value: 7e-05 Identity: 72.73% Span: 33bp (3.3%) Frame: 3
cold-shock DNA-binding family protein | chr2:7771358-7772263 REVERSE

5 lower scoring hits censored -- only 7 best hits are stored.
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|18398546|ref|NP_565427.1| score: 111 e-value: 6e-23 Identity: 42.86% Span: 570bp (56.5%) Frame: 2
cold-shock DNA-binding family protein [Arabidopsis thaliana] >gi14334920|gb|AAK59638.1| putative glycine-rich, zinc-f...
Match: gi|50904847|ref|XP_463912.1| score: 111 e-value: 6e-23 Identity: 50% Span: 558bp (55.4%) Frame: 2
putative
Match: gi|2708747|gb|AAD03571.1| score: 110 e-value: 8e-23 Identity: 42.86% Span: 558bp (55.4%) Frame: 2
putative
Match: gi|15233440|ref|NP_195326.1| score: 104 e-value: 7e-21 Identity: 44.12% Span: 651bp (64.6%) Frame: 2
CSDP1 (cold shock domain protein 1); RNA binding / double-stranded DNA binding / nucleic acid binding / single-strand...
Match: gi|76577745|gb|ABA54143.1| score: 100 e-value: 8e-20 Identity: 41.08% Span: 552bp (54.8%) Frame: 2
putative glycine-rich protein [Picea glauca]
Match: gi|19743|emb|CAA42622.1| score: 91.7 e-value: 5e-17 Identity: 61.54% Span: 228bp (22.6%) Frame: 2
nsGRP-2
Match: gi|15234010|ref|NP_195580.1| score: 91.7 e-value: 5e-17 Identity: 45.19% Span: 381bp (37.8%) Frame: 2
GRP2 (GLYCINE RICH PROTEIN 2); double-stranded DNA binding / mRNA binding / nucleic acid binding / single-stranded DN...
Match: gi|15226451|ref|NP_179702.1| score: 86.3 e-value: 2e-15 Identity: 42.05% Span: 552bp (54.8%) Frame: 2
ATGRP2B (GLYCINE-RICH PROTEIN 2B); DNA binding / nucleic acid binding / zinc ion binding [Arabidopsis thaliana] >gi17...
Match: gi|50940785|ref|XP_479920.1| score: 84.3 e-value: 8e-15 Identity: 56% Span: 222bp (22.0%) Frame: 2
putative
Match: gi|21322752|dbj|BAB78536.2| score: 82 e-value: 4e-14 Identity: 58.9% Span: 216bp (21.4%) Frame: 2
cold shock protein-1 [Triticum aestivum]
Match: gi|42391858|dbj|BAD08701.1| score: 82 e-value: 4e-14 Identity: 58.9% Span: 216bp (21.4%) Frame: 2
gi|42391858|dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum]
Match: gi|40363759|dbj|BAD06324.1| score: 81.3 e-value: 6e-14 Identity: 57.53% Span: 216bp (21.4%) Frame: 2
gi|40363759|dbj|BAD06324.1| putative glycine-rich protein [Triticum aestivum] >gi|42391853|dbj|BAD08700.1| cold shock...
Match: gi|30527347|gb|AAN77901.2| score: 76.3 e-value: 2e-12 Identity: 52.7% Span: 219bp (21.7%) Frame: 2
gi|30527347|gb|AAN77901.2| putative nucleic acid binding protein [Chlamydomonas reinhardtii]
Match: gi|74272681|gb|ABA01136.1| score: 76.3 e-value: 2e-12 Identity: 52.7% Span: 219bp (21.7%) Frame: 2
putative
Match: gi|65303457|emb|CAI75835.1| score: 75.5 e-value: 4e-12 Identity: 51.43% Span: 210bp (20.8%) Frame: 2
cold
Match: gi|67602636|ref|XP_666494.1| score: 75.1 e-value: 5e-12 Identity: 47.22% Span: 213bp (21.1%) Frame: 2
glycogen
Match: gi|66359918|ref|XP_627137.1| score: 75.1 e-value: 5e-12 Identity: 47.22% Span: 213bp (21.1%) Frame: 2
cold
Match: gi|71027909|ref|XP_763598.1| score: 74.3 e-value: 8e-12 Identity: 50.7% Span: 213bp (21.1%) Frame: 2
cold
Match: gi|349561|gb|AAB66357.1| score: 72.8 e-value: 2e-11 Identity: 53.73% Span: 201bp (19.9%) Frame: 2
gi|349561|gb|AAB66357.1| DNA-binding protein
Match: gi|16131427|ref|NP_418012.1| score: 72.4 e-value: 3e-11 Identity: 61.11% Span: 162bp (16.1%) Frame: 2
major
Match: gi|576191|pdb|1MJC| score: 72.4 e-value: 3e-11 Identity: 61.11% Span: 162bp (16.1%) Frame: 2
gi|576191|pdb|1MJC| Major Cold Shock Protein 7.4 (Cspa (Cs 7.4)) Of (Escherichia Coli)
Match: gi|3891780|pdb|3MEF|A score: 72 e-value: 4e-11 Identity: 63.46% Span: 156bp (15.5%) Frame: 2
gi|3891780|pdb|3MEF|A Chain A, Major Cold-Shock Protein From Escherichia Coli Solution Nmr Structure
Match: gi|83814746|ref|YP_445845.1| score: 72 e-value: 4e-11 Identity: 55.71% Span: 204bp (20.2%) Frame: 2
hypothetical
Match: gi|110834144|ref|YP_693003.1| score: 72 e-value: 4e-11 Identity: 53.23% Span: 186bp (18.5%) Frame: 2
cold-shock
Match: gi|91797711|gb|ABE59850.1| score: 72 e-value: 4e-11 Identity: 53.23% Span: 186bp (18.5%) Frame: 2
cold-shock
Match: gi|68245163|gb|EAN27297.1| score: 71.6 e-value: 5e-11 Identity: 60.66% Span: 180bp (17.9%) Frame: 2
Cold-shock
Match: gi|91783753|ref|YP_558959.1| score: 71.2 e-value: 7e-11 Identity: 54.84% Span: 186bp (18.5%) Frame: 2
Putative
Match: gi|68246249|gb|EAN28351.1| score: 71.2 e-value: 7e-11 Identity: 60.66% Span: 180bp (17.9%) Frame: 2
Cold-shock
Match: gi|72122296|gb|AAZ64482.1| score: 70.9 e-value: 9e-11 Identity: 54.84% Span: 186bp (18.5%) Frame: 2
Cold-shock
Match: gi|30180610|emb|CAD85223.1| score: 70.5 e-value: 1e-10 Identity: 52.31% Span: 195bp (19.3%) Frame: 2
Cold-shock
Match: gi|23464629|ref|NP_695232.1| score: 69.3 e-value: 3e-10 Identity: 53.85% Span: 183bp (18.2%) Frame: 2
gi|23464629|ref|NP_695232.1| cold shock protein [Bifidobacterium longum NCC2705] gi|23325186|gb|AAN23868.1| cold shoc...
Match: gi|91796882|gb|ABE59021.1| score: 68.9 e-value: 3e-10 Identity: 50% Span: 186bp (18.5%) Frame: 2
cold-shock
Match: gi|41406767|ref|NP_959603.1| score: 68.9 e-value: 3e-10 Identity: 53.23% Span: 186bp (18.5%) Frame: 2
gi|41406767|ref|NP_959603.1| CspA_2 [Mycobacterium avium subsp. paratuberculosis str. k10] >gi|41395117|gb|AAS02986.1...
Match: gi|62425152|ref|ZP_00380289.1| score: 68.9 e-value: 3e-10 Identity: 54.84% Span: 186bp (18.5%) Frame: 2
COG1278:
Match: gi|86156680|ref|YP_463465.1| score: 68.9 e-value: 3e-10 Identity: 60.71% Span: 168bp (16.7%) Frame: 2
cold-shock
Match: gi|34913774|ref|NP_918234.1| score: 68.9 e-value: 3e-10 Identity: 47.14% Span: 207bp (20.5%) Frame: 2
gi|34913774|ref|NP_918234.1| cold shock protein-like [Oryza sativa (japonica cultivar-group)] gi|20146448|dbj|BAB8922...
Match: gi|57900030|dbj|BAD88072.1| score: 68.9 e-value: 3e-10 Identity: 47.14% Span: 207bp (20.5%) Frame: 2
cold
Match: gi|33575435|emb|CAE32513.1| score: 68.9 e-value: 3e-10 Identity: 49.23% Span: 195bp (19.3%) Frame: 2
putative
Match: gi|84361035|ref|ZP_00985719.1| score: 68.9 e-value: 3e-10 Identity: 54.69% Span: 189bp (18.8%) Frame: 2
COG1278:
Match: gi|33575669|emb|CAE32747.1| score: 68.6 e-value: 4e-10 Identity: 64.58% Span: 144bp (14.3%) Frame: 2
cold
Match: gi|36786105|emb|CAE15157.1| score: 67.8 e-value: 7e-10 Identity: 58.82% Span: 153bp (15.2%) Frame: 2
cold
Match: gi|16129516|ref|NP_416075.1| score: 67.8 e-value: 7e-10 Identity: 55.56% Span: 162bp (16.1%) Frame: 2
gi|16129516|ref|NP_416075.1| CspB [Escherichia coli K12] gi|544108|sp|P36995|CSPB_ECOLI Cold shock-like protein cspB ...
Match: gi|72170454|ref|XP_792032.1| score: 67.8 e-value: 7e-10 Identity: 36.29% Span: 372bp (36.9%) Frame: 2
PREDICTED:
Match: gi|51094320|gb|AAT95330.1| score: 67.8 e-value: 7e-10 Identity: 52.31% Span: 183bp (18.2%) Frame: 2
CspA
Match: gi|94676996|ref|YP_588711.1| score: 67.4 e-value: 1e-09 Identity: 49.23% Span: 195bp (19.3%) Frame: 2
cold
Match: gi|30180730|emb|CAD85642.1| score: 67.4 e-value: 1e-09 Identity: 60.78% Span: 153bp (15.2%) Frame: 2
Cold-shock
Match: gi|71846641|gb|AAZ46137.1| score: 67.4 e-value: 1e-09 Identity: 51.61% Span: 186bp (18.5%) Frame: 2
Cold-shock
Match: gi|66963407|ref|ZP_00410979.1| score: 67.4 e-value: 1e-09 Identity: 62.75% Span: 153bp (15.2%) Frame: 2
Cold-shock
Match: gi|68264648|emb|CAI38136.1| score: 67.4 e-value: 1e-09 Identity: 54.84% Span: 186bp (18.5%) Frame: 2
putative
Match: gi|72123192|gb|AAZ65346.1| score: 67.4 e-value: 1e-09 Identity: 60.42% Span: 144bp (14.3%) Frame: 2
Cold-shock
Match: gi|84497345|ref|ZP_00996167.1| score: 67.4 e-value: 1e-09 Identity: 54.69% Span: 192bp (19.0%) Frame: 2
putative
Match: gi|72123204|gb|AAZ65358.1| score: 67.4 e-value: 1e-09 Identity: 60.42% Span: 144bp (14.3%) Frame: 2
Cold-shock
Match: gi|82703364|ref|YP_412930.1| score: 67.4 e-value: 1e-09 Identity: 60.78% Span: 153bp (15.2%) Frame: 2
cold-shock
Match: gi|28199264|ref|NP_779578.1| score: 67 e-value: 1e-09 Identity: 50.79% Span: 189bp (18.8%) Frame: 2
cold
Match: gi|56314020|emb|CAI08665.1| score: 67 e-value: 1e-09 Identity: 58.82% Span: 153bp (15.2%) Frame: 2
putative
Match: gi|23004357|ref|ZP_00047730.1| score: 67 e-value: 1e-09 Identity: 58.82% Span: 153bp (15.2%) Frame: 2
gi|23004357|ref|ZP_00047730.1| COG1278: Cold shock proteins [Magnetospirillum magnetotacticum]
Match: gi|90201757|ref|ZP_01204403.1| score: 67 e-value: 1e-09 Identity: 53.23% Span: 186bp (18.5%) Frame: 2
Cold-shock
Match: gi|71550911|ref|ZP_00670982.1| score: 67 e-value: 1e-09 Identity: 49.23% Span: 195bp (19.3%) Frame: 2
Cold-shock
Match: gi|49610759|emb|CAG74204.1| score: 67 e-value: 1e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
cold
Match: gi|33572487|emb|CAE42059.1| score: 67 e-value: 1e-09 Identity: 57.38% Span: 177bp (17.6%) Frame: 2
cold
Match: gi|74316873|ref|YP_314613.1| score: 67 e-value: 1e-09 Identity: 49.25% Span: 201bp (19.9%) Frame: 2
Possible
Match: gi|36787087|emb|CAE16162.1| score: 66.6 e-value: 2e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
cold
Match: gi|25166132|dbj|BAC24323.1| score: 66.6 e-value: 2e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
cspE
Match: gi|108799262|ref|YP_639459.1| score: 66.6 e-value: 2e-09 Identity: 53.23% Span: 186bp (18.5%) Frame: 2
cold-shock
Match: gi|67987471|gb|EAM75266.1| score: 66.6 e-value: 2e-09 Identity: 65.96% Span: 141bp (14.0%) Frame: 2
Cold-shock
Match: gi|74095589|emb|CAJ27355.1| score: 66.6 e-value: 2e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
strongly
Match: gi|108803028|ref|YP_642965.1| score: 66.6 e-value: 2e-09 Identity: 51.61% Span: 186bp (18.5%) Frame: 2
cold-shock
Match: gi|76582952|gb|ABA52426.1| score: 66.2 e-value: 2e-09 Identity: 57.14% Span: 168bp (16.7%) Frame: 2
cold
Match: gi|62179228|ref|YP_215645.1| score: 66.2 e-value: 2e-09 Identity: 46.97% Span: 198bp (19.6%) Frame: 2
cold
Match: gi|71848327|gb|AAZ47823.1| score: 66.2 e-value: 2e-09 Identity: 55% Span: 180bp (17.9%) Frame: 2
Cold-shock
Match: gi|9107526|gb|AAF85151.1| score: 66.2 e-value: 2e-09 Identity: 49.21% Span: 189bp (18.8%) Frame: 2
cold
Match: gi|28869573|ref|NP_792192.1| score: 66.2 e-value: 2e-09 Identity: 53.33% Span: 180bp (17.9%) Frame: 2
gi|28869573|ref|NP_792192.1| cold shock domain family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|288528...
Match: gi|26109433|gb|AAN81636.1| score: 66.2 e-value: 2e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
Cold
Match: gi|45440950|ref|NP_992489.1| score: 66.2 e-value: 2e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
cold
Match: gi|108808497|ref|YP_652413.1| score: 66.2 e-value: 2e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
putative
Match: gi|77973021|ref|ZP_00828574.1| score: 66.2 e-value: 2e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
COG1278:
Match: gi|16501881|emb|CAD05106.1| score: 66.2 e-value: 2e-09 Identity: 46.97% Span: 198bp (19.6%) Frame: 2
cold
Match: gi|91795970|gb|ABE58109.1| score: 66.2 e-value: 2e-09 Identity: 50% Span: 186bp (18.5%) Frame: 2
cold-shock
Match: gi|90021330|ref|YP_527157.1| score: 66.2 e-value: 2e-09 Identity: 58.93% Span: 168bp (16.7%) Frame: 2
putative
Match: gi|52427361|gb|AAU47954.1| score: 66.2 e-value: 2e-09 Identity: 50% Span: 186bp (18.5%) Frame: 2
cold-shock
Match: gi|58581493|ref|YP_200509.1| score: 66.2 e-value: 2e-09 Identity: 47.22% Span: 207bp (20.5%) Frame: 2
cold
Match: gi|72609290|gb|EAO45240.1| score: 66.2 e-value: 2e-09 Identity: 53.12% Span: 189bp (18.8%) Frame: 2
Cold-shock
Match: gi|77970184|gb|ABB11563.1| score: 65.9 e-value: 3e-09 Identity: 49.21% Span: 189bp (18.8%) Frame: 2
cold-shock
Match: gi|91777186|ref|YP_552394.1| score: 65.9 e-value: 3e-09 Identity: 60.42% Span: 144bp (14.3%) Frame: 2
Cold-shock
Match: gi|72122499|gb|AAZ64685.1| score: 65.9 e-value: 3e-09 Identity: 49.21% Span: 189bp (18.8%) Frame: 2
Cold-shock
Match: gi|49611923|emb|CAG75372.1| score: 65.9 e-value: 3e-09 Identity: 55.56% Span: 162bp (16.1%) Frame: 2
cold
Match: gi|66045400|ref|YP_235241.1| score: 65.9 e-value: 3e-09 Identity: 53.33% Span: 180bp (17.9%) Frame: 2
Cold-shock
Match: gi|27904309|gb|AAO27142.1| score: 65.9 e-value: 3e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
cold
Match: gi|1616777|gb|AAB16850.1| score: 65.9 e-value: 3e-09 Identity: 58.82% Span: 153bp (15.2%) Frame: 2
cold
Match: gi|21672738|ref|NP_660805.1| score: 65.9 e-value: 3e-09 Identity: 53.7% Span: 162bp (16.1%) Frame: 2
cold
Match: gi|94314735|ref|YP_587944.1| score: 65.9 e-value: 3e-09 Identity: 47.62% Span: 189bp (18.8%) Frame: 2
cold-shock
Match: gi|91784982|ref|YP_560188.1| score: 65.5 e-value: 4e-09 Identity: 47.69% Span: 195bp (19.3%) Frame: 2
Cold-shock
Match: gi|16128606|ref|NP_415156.1| score: 65.5 e-value: 4e-09 Identity: 51.85% Span: 162bp (16.1%) Frame: 2
cold
Match: gi|27550093|gb|AAO18076.1| score: 65.5 e-value: 4e-09 Identity: 51.85% Span: 162bp (16.1%) Frame: 2
gi|27550093|gb|AAO18076.1| unknown [Photorhabdus luminescens]
Match: gi|108466992|gb|ABF92177.1| score: 65.5 e-value: 4e-09 Identity: 57.14% Span: 168bp (16.7%) Frame: 2
cold-shock
Match: gi|108803141|ref|YP_643078.1| score: 65.5 e-value: 4e-09 Identity: 51.61% Span: 186bp (18.5%) Frame: 2
cold-shock
Match: gi|110804727|ref|YP_688247.1| score: 65.5 e-value: 4e-09 Identity: 51.85% Span: 162bp (16.1%) Frame: 2
cold
Match: gi|108462573|gb|ABF87758.1| score: 65.5 e-value: 4e-09 Identity: 62.5% Span: 144bp (14.3%) Frame: 2
cold-shock
Match: gi|91776492|ref|YP_546248.1| score: 65.5 e-value: 4e-09 Identity: 58.82% Span: 153bp (15.2%) Frame: 2
cold-shock
Match: gi|55239344|gb|EAA11383.2| score: 65.5 e-value: 4e-09 Identity: 32.26% Span: 372bp (36.9%) Frame: 2
ENSANGP00000011455

156 lower scoring hits censored -- only 100 best hits are stored.