| arabidopsis/peptide [blastx] | Showing best 36 hits recorded |
| Match: At3G61860.1 |
score: 286 |
e-value: 1e-77 |
Identity: 65.24% |
Span: 681bp (66.8%) |
Frame: 3 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At2G46610.1 |
score: 266 |
e-value: 1e-71 |
Identity: 62.77% |
Span: 681bp (66.8%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At5G52040.2 |
score: 224 |
e-value: 6e-59 |
Identity: 53.81% |
Span: 699bp (68.5%) |
Frame: 3 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At5G52040.1 |
score: 224 |
e-value: 6e-59 |
Identity: 53.81% |
Span: 699bp (68.5%) |
Frame: 3 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At2G46610.2 |
score: 223 |
e-value: 2e-58 |
Identity: 61.76% |
Span: 600bp (58.8%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At4G25500.1 |
score: 219 |
e-value: 2e-57 |
Identity: 52.21% |
Span: 693bp (67.9%) |
Frame: 3 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At4G25500.2 |
score: 162 |
e-value: 3e-40 |
Identity: 49.52% |
Span: 576bp (56.5%) |
Frame: 3 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At1G02840.2 |
score: 69.3 |
e-value: 3e-12 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
| Match: At1G02840.1 |
score: 69.3 |
e-value: 3e-12 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.3 |
score: 69.3 |
e-value: 3e-12 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At4G02430.2 |
score: 68.9 |
e-value: 5e-12 |
Identity: 27.14% |
Span: 720bp (70.6%) |
Frame: 3 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1071313 FORWARD |
| Match: At4G02430.1 |
score: 65.9 |
e-value: 4e-11 |
Identity: 45.45% |
Span: 249bp (24.4%) |
Frame: 3 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1070543 FORWARD |
| Match: At1G09140.1 |
score: 64.7 |
e-value: 8e-11 |
Identity: 31.46% |
Span: 486bp (47.6%) |
Frame: 3 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At1G09140.2 |
score: 64.7 |
e-value: 8e-11 |
Identity: 31.46% |
Span: 486bp (47.6%) |
Frame: 3 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At2G37340.1 |
score: 64.7 |
e-value: 8e-11 |
Identity: 46.15% |
Span: 234bp (22.9%) |
Frame: 3 |
| Symbols: ATRSZ33, RSZ33 | RSZ33 (Arginine/serine-rich Zinc knuckle-containing protein 33); nucleic acid binding / nu... |
| Match: At3G53500.2 |
score: 63.5 |
e-value: 2e-10 |
Identity: 45.57% |
Span: 237bp (23.2%) |
Frame: 3 |
| Symbols: RSZ32 | RSZ32; nucleic acid binding | chr3:19845535-19847485 REVERSE |
| Match: At3G49430.1 |
score: 58.9 |
e-value: 5e-09 |
Identity: 41.86% |
Span: 243bp (23.8%) |
Frame: 3 |
| Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A); RNA binding | chr3:18343653-18345814 FORWARD |
| Match: At1G29400.2 |
score: 58.2 |
e-value: 8e-09 |
Identity: 31.1% |
Span: 471bp (46.2%) |
Frame: 3 |
| Symbols: AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding | chr1:10290379-10293682 REVERSE |
| Match: At1G29400.1 |
score: 58.2 |
e-value: 8e-09 |
Identity: 31.1% |
Span: 471bp (46.2%) |
Frame: 3 |
| Symbols: AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding | chr1:10290379-10293682 REVERSE |
| Match: At5G41690.1 |
score: 58.2 |
e-value: 8e-09 |
Identity: 25% |
Span: 537bp (52.6%) |
Frame: 3 |
| RNA binding | chr5:16687354-16691417 REVERSE |
| Match: At1G43190.1 |
score: 53.1 |
e-value: 3e-07 |
Identity: 25.95% |
Span: 477bp (46.8%) |
Frame: 3 |
| polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative | chr1:16277872-1... |
| Match: At3G14100.1 |
score: 50.8 |
e-value: 1e-06 |
Identity: 25.38% |
Span: 552bp (54.1%) |
Frame: 3 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At5G50250.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 27.12% |
Span: 477bp (46.8%) |
Frame: 3 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At2G36660.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 30.19% |
Span: 432bp (42.4%) |
Frame: 3 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At4G34110.1 |
score: 49.7 |
e-value: 3e-06 |
Identity: 26.18% |
Span: 498bp (48.8%) |
Frame: 3 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G49760.1 |
score: 48.1 |
e-value: 8e-06 |
Identity: 23.24% |
Span: 498bp (48.8%) |
Frame: 3 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At4G24770.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 24.04% |
Span: 501bp (49.1%) |
Frame: 3 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At2G23350.1 |
score: 47.4 |
e-value: 1e-05 |
Identity: 25% |
Span: 462bp (45.3%) |
Frame: 3 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At3G11400.1 |
score: 47 |
e-value: 2e-05 |
Identity: 40% |
Span: 201bp (19.7%) |
Frame: 3 |
| Symbols: ATEIF3G1, EIF3G1 | EIF3G1 (eukaryotic translation initiation factor 3G1); RNA binding / translation initiat... |
| Match: At3G19130.1 |
score: 47 |
e-value: 2e-05 |
Identity: 34.15% |
Span: 240bp (23.5%) |
Frame: 3 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At1G17370.1 |
score: 47 |
e-value: 2e-05 |
Identity: 28.22% |
Span: 444bp (43.5%) |
Frame: 3 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At3G53500.2 |
score: 45.4 |
e-value: 5e-05 |
Identity: 35.62% |
Span: 201bp (19.7%) |
Frame: 3 |
| Symbols: RSZ32 | RSZ32; nucleic acid binding | chr3:19845535-19847485 REVERSE |
| Match: At4G26650.1 |
score: 44.7 |
e-value: 9e-05 |
Identity: 23.59% |
Span: 486bp (47.6%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
| Match: At4G26650.2 |
score: 44.7 |
e-value: 9e-05 |
Identity: 23.59% |
Span: 486bp (47.6%) |
Frame: 3 |
| RNA binding | chr4:13445271-13447598 FORWARD |
| Match: At4G14300.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 24.12% |
Span: 507bp (49.7%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
| Match: At5G06000.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 37.33% |
Span: 201bp (19.7%) |
Frame: 3 |
| Symbols: ATEIF3G2, EIF3G2 | EIF3G2 (eukaryotic translation initiation factor 3G2); RNA binding / translation initiat... |
|
| 85 lower scoring hits censored -- only 36 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|6899884|emb|CAB71893.1| |
score: 286 |
e-value: 1e-75 |
Identity: 65.24% |
Span: 681bp (66.8%) |
Frame: 3 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 286 |
e-value: 1e-75 |
Identity: 65.24% |
Span: 681bp (66.8%) |
Frame: 3 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|1707366|emb|CAA67798.1| |
score: 285 |
e-value: 2e-75 |
Identity: 64.81% |
Span: 681bp (66.8%) |
Frame: 3 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|47680295|gb|AAT37131.1| |
score: 274 |
e-value: 5e-72 |
Identity: 61.34% |
Span: 708bp (69.4%) |
Frame: 3 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|50921405|ref|XP_471063.1| |
score: 272 |
e-value: 2e-71 |
Identity: 60% |
Span: 702bp (68.8%) |
Frame: 3 |
| gi|50921405|ref|XP_471063.1| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] >gi|38344865|emb|CAE01291.2| OS... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 266 |
e-value: 1e-69 |
Identity: 62.77% |
Span: 681bp (66.8%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 263 |
e-value: 9e-69 |
Identity: 58.75% |
Span: 708bp (69.4%) |
Frame: 3 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|47680309|gb|AAT37138.1| |
score: 238 |
e-value: 4e-61 |
Identity: 65.71% |
Span: 525bp (51.5%) |
Frame: 3 |
| gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays] >gi|47680375|gb|AAT37129.1| ar... |
| Match: gi|41323931|gb|AAS00039.1| |
score: 229 |
e-value: 1e-58 |
Identity: 56.03% |
Span: 681bp (66.8%) |
Frame: 3 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|50904881|ref|XP_463929.1| |
score: 227 |
e-value: 6e-58 |
Identity: 56.9% |
Span: 684bp (67.1%) |
Frame: 3 |
| gi|50904881|ref|XP_463929.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa (japonica cultivar-gro... |
| Match: gi|30696138|ref|NP_851174.1| |
score: 224 |
e-value: 5e-57 |
Identity: 53.81% |
Span: 699bp (68.5%) |
Frame: 3 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 224 |
e-value: 5e-57 |
Identity: 53.81% |
Span: 699bp (68.5%) |
Frame: 3 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|1707370|emb|CAA67799.1| |
score: 223 |
e-value: 1e-56 |
Identity: 53.39% |
Span: 699bp (68.5%) |
Frame: 3 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|42571257|ref|NP_973702.1| |
score: 223 |
e-value: 1e-56 |
Identity: 61.76% |
Span: 600bp (58.8%) |
Frame: 3 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 219 |
e-value: 1e-55 |
Identity: 52.21% |
Span: 693bp (67.9%) |
Frame: 3 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|1667582|gb|AAB18813.1| |
score: 218 |
e-value: 3e-55 |
Identity: 52.21% |
Span: 693bp (67.9%) |
Frame: 3 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|7269400|emb|CAB81360.1| |
score: 218 |
e-value: 3e-55 |
Identity: 51.81% |
Span: 693bp (67.9%) |
Frame: 3 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|6759507|emb|CAB69816.1| |
score: 166 |
e-value: 2e-39 |
Identity: 70.54% |
Span: 336bp (32.9%) |
Frame: 3 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|42573039|ref|NP_974616.1| |
score: 162 |
e-value: 2e-38 |
Identity: 49.52% |
Span: 576bp (56.5%) |
Frame: 3 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|111226838|ref|XP_001134599.1| |
score: 89 |
e-value: 3e-16 |
Identity: 31.25% |
Span: 516bp (50.6%) |
Frame: 3 |
| RNA-binding |
| Match: gi|66820066|ref|XP_643679.1| |
score: 89 |
e-value: 3e-16 |
Identity: 31.25% |
Span: 516bp (50.6%) |
Frame: 3 |
| gi|66820066|ref|XP_643679.1| hypothetical protein DDB0217653 [Dictyostelium discoideum] >gi|60471815|gb|EAL69770.1| h... |
| Match: gi|39582979|emb|CAE73044.1| |
score: 78.6 |
e-value: 4e-13 |
Identity: 33.93% |
Span: 426bp (41.8%) |
Frame: 3 |
| gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae] |
| Match: gi|39583259|emb|CAE60051.1| |
score: 77.8 |
e-value: 7e-13 |
Identity: 34.25% |
Span: 423bp (41.5%) |
Frame: 3 |
| gi|39583259|emb|CAE60051.1| Hypothetical protein CBG03563 [Caenorhabditis briggsae] |
| Match: gi|46249892|gb|AAH68361.1| |
score: 77 |
e-value: 1e-12 |
Identity: 35.03% |
Span: 471bp (46.2%) |
Frame: 3 |
| Zgc:85696 |
| Match: gi|50939903|ref|XP_479479.1| |
score: 75.9 |
e-value: 3e-12 |
Identity: 30.96% |
Span: 543bp (53.2%) |
Frame: 3 |
| gi|50939903|ref|XP_479479.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] >gi|33146... |
| Match: gi|47212234|emb|CAF96201.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 34.39% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|47212234|emb|CAF96201.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|11527011|gb|AAG36874.1| |
score: 74.3 |
e-value: 8e-12 |
Identity: 48.81% |
Span: 240bp (23.5%) |
Frame: 3 |
| gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] |
| Match: gi|68397653|ref|XP_688805.1| |
score: 74.3 |
e-value: 8e-12 |
Identity: 34.39% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|68397653|ref|XP_688805.1| PREDICTED: hypothetical protein LOC323721 isoform 1 [Danio rerio] |
| Match: gi|25150290|ref|NP_499649.2| |
score: 73.6 |
e-value: 1e-11 |
Identity: 49.38% |
Span: 231bp (22.6%) |
Frame: 3 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|55792397|gb|AAV65309.1| |
score: 72.8 |
e-value: 2e-11 |
Identity: 28.92% |
Span: 564bp (55.3%) |
Frame: 3 |
| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|68037673|gb|AAY84884.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 28.92% |
Span: 564bp (55.3%) |
Frame: 3 |
| alternative splicing regulator [Triticum aestivum] |
| Match: gi|52140015|gb|AAU29336.1| |
score: 72 |
e-value: 4e-11 |
Identity: 32.81% |
Span: 528bp (51.8%) |
Frame: 3 |
| gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays] |
| Match: gi|52140012|gb|AAU29333.1| |
score: 72 |
e-value: 4e-11 |
Identity: 32.81% |
Span: 528bp (51.8%) |
Frame: 3 |
| gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays] |
| Match: gi|52140013|gb|AAU29334.1| |
score: 72 |
e-value: 4e-11 |
Identity: 32.81% |
Span: 528bp (51.8%) |
Frame: 3 |
| gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays] |
| Match: gi|91094955|ref|XP_969451.1| |
score: 71.2 |
e-value: 7e-11 |
Identity: 28.93% |
Span: 507bp (49.7%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|71033489|ref|XP_766386.1| |
score: 70.5 |
e-value: 1e-10 |
Identity: 29.18% |
Span: 723bp (70.9%) |
Frame: 3 |
| hypothetical |
| Match: gi|66519636|ref|XP_623609.1| |
score: 69.7 |
e-value: 2e-10 |
Identity: 28.96% |
Span: 507bp (49.7%) |
Frame: 3 |
| gi|66519636|ref|XP_623609.1| PREDICTED: similar to CG10851-PA, isoform A [Apis mellifera] |
| Match: gi|5815239|gb|AAD52613.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana] |
| Match: gi|2443473|gb|AAB71386.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] |
| Match: gi|30678398|ref|NP_563665.3| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| SR1; |
| Match: gi|5815237|gb|AAD52611.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana] |
| Match: gi|54641438|gb|EAL30188.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 30.28% |
Span: 426bp (41.8%) |
Frame: 3 |
| GA21193-PA |
| Match: gi|166844|gb|AAA32856.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|166844|gb|AAA32856.1| ribonucleoprotein >gi|1582992|prf||2119375A Ser/Arg-rich protein |
| Match: gi|5815238|gb|AAD52612.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana] |
| Match: gi|5815236|gb|AAD52610.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana] |
| Match: gi|5815235|gb|AAD52609.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|5815235|gb|AAD52609.1| splicing factor SR1 [Arabidopsis thaliana] |
| Match: gi|1518654|gb|AAB07067.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 30.28% |
Span: 426bp (41.8%) |
Frame: 3 |
| RNA-binding |
| Match: gi|30678395|ref|NP_850934.1| |
score: 69.3 |
e-value: 3e-10 |
Identity: 45.26% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|22135918|gb|AAM9154... |
| Match: gi|30679143|ref|NP_567235.3| |
score: 68.9 |
e-value: 3e-10 |
Identity: 27.14% |
Span: 720bp (70.6%) |
Frame: 3 |
| gi|30679143|ref|NP_567235.3| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] |
| Match: gi|66814778|ref|XP_641568.1| |
score: 68.9 |
e-value: 3e-10 |
Identity: 28.57% |
Span: 480bp (47.1%) |
Frame: 3 |
| gi|66814778|ref|XP_641568.1| RNA recognition motif RNP-1-containing protein [Dictyostelium discoideum] >gi|60469605|g... |
| Match: gi|76658010|ref|XP_887082.1| |
score: 68.6 |
e-value: 4e-10 |
Identity: 29.68% |
Span: 465bp (45.6%) |
Frame: 3 |
| gi|76658010|ref|XP_887082.1| PREDICTED: similar to zinc responsive protein ZD7 isoform 3 [Bos taurus] >gi|73982912|re... |
| Match: gi|52140005|gb|AAU29328.1| |
score: 68.2 |
e-value: 6e-10 |
Identity: 28.5% |
Span: 552bp (54.1%) |
Frame: 3 |
| gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays] |
| Match: gi|52140006|gb|AAU29329.1| |
score: 68.2 |
e-value: 6e-10 |
Identity: 28.5% |
Span: 552bp (54.1%) |
Frame: 3 |
| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] |
| Match: gi|63100727|gb|AAH95368.1| |
score: 67.8 |
e-value: 8e-10 |
Identity: 33.54% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|63100727|gb|AAH95368.1| Zgc:110682 protein [Danio rerio] >gi|68397651|ref|XP_709887.1| PREDICTED: similar to RNA b... |
| Match: gi|46249455|gb|AAH68622.1| |
score: 67.4 |
e-value: 1e-09 |
Identity: 26.56% |
Span: 489bp (47.9%) |
Frame: 3 |
| gi|46249455|gb|AAH68622.1| Unknown (protein for IMAGE:4404381) [Xenopus laevis] |
| Match: gi|56388745|gb|AAH87684.1| |
score: 67.4 |
e-value: 1e-09 |
Identity: 29.73% |
Span: 528bp (51.8%) |
Frame: 3 |
| Splicing |
| Match: gi|76628179|ref|XP_882895.1| |
score: 67.4 |
e-value: 1e-09 |
Identity: 27.27% |
Span: 672bp (65.9%) |
Frame: 3 |
| gi|76628179|ref|XP_882895.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor ... |
| Match: gi|71996524|ref|NP_495307.3| |
score: 67.4 |
e-value: 1e-09 |
Identity: 38.74% |
Span: 327bp (32.1%) |
Frame: 3 |
| SR |
| Match: gi|71996546|ref|NP_495308.3| |
score: 67.4 |
e-value: 1e-09 |
Identity: 38.74% |
Span: 327bp (32.1%) |
Frame: 3 |
| SR |
| Match: gi|71996532|ref|NP_495309.3| |
score: 67.4 |
e-value: 1e-09 |
Identity: 38.74% |
Span: 327bp (32.1%) |
Frame: 3 |
| SR |
| Match: gi|39597103|emb|CAE59330.1| |
score: 67 |
e-value: 1e-09 |
Identity: 41.11% |
Span: 270bp (26.5%) |
Frame: 3 |
| gi|39597103|emb|CAE59330.1| Hypothetical protein CBG02672 [Caenorhabditis briggsae] |
| Match: gi|108708089|gb|ABF95884.1| |
score: 67 |
e-value: 1e-09 |
Identity: 28.5% |
Span: 543bp (53.2%) |
Frame: 3 |
| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi215692748|dbj|BAG88168.... |
| Match: gi|108708090|gb|ABF95885.1| |
score: 67 |
e-value: 1e-09 |
Identity: 28.5% |
Span: 543bp (53.2%) |
Frame: 3 |
| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|73966552|ref|XP_866810.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 29.28% |
Span: 522bp (51.2%) |
Frame: 3 |
| gi|73966552|ref|XP_866810.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (ASF/SF2) isoform 8 [Canis... |
| Match: gi|57099639|ref|XP_533216.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 27.71% |
Span: 726bp (71.2%) |
Frame: 3 |
| gi|57099639|ref|XP_533216.1| PREDICTED: similar to zinc responsive protein ZD7 isoform 1 [Canis familiaris] >gi|73982... |
| Match: gi|34495359|gb|AAQ73500.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 27.71% |
Span: 726bp (71.2%) |
Frame: 3 |
| gi|34495359|gb|AAQ73500.1| zinc responsive protein ZD7 [Rattus norvegicus] |
| Match: gi|55562771|gb|AAH86416.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 27.71% |
Span: 726bp (71.2%) |
Frame: 3 |
| Zinc |
| Match: gi|27754120|ref|NP_079993.2| |
score: 66.6 |
e-value: 2e-09 |
Identity: 27.71% |
Span: 726bp (71.2%) |
Frame: 3 |
| gi|27754120|ref|NP_079993.2| RBM4-like protein [Mus musculus] gi|18044496|gb|AAH19488.1| RBM4-like protein [Mus muscu... |
| Match: gi|13899354|ref|NP_113680.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 27.71% |
Span: 726bp (71.2%) |
Frame: 3 |
| gi|13899354|ref|NP_113680.1| hypothetical protein similar to RNA-binding protein lark [Homo sapiens] gi|13097558|gb|A... |
| Match: gi|76638495|ref|XP_586968.2| |
score: 66.6 |
e-value: 2e-09 |
Identity: 28.99% |
Span: 525bp (51.5%) |
Frame: 3 |
| gi|76638495|ref|XP_586968.2| PREDICTED: similar to splicing factor, arginine/serine rich 9 (predicted) isoform 1 [Bos... |
| Match: gi|13182931|gb|AAK14991.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 27.71% |
Span: 726bp (71.2%) |
Frame: 3 |
| gi|13182931|gb|AAK14991.1| RNA-binding protein lark [Oryctolagus cuniculus] |
| Match: gi|2078529|gb|AAC51293.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| Hlark |
| Match: gi|56270156|gb|AAH87121.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 26.7% |
Span: 498bp (48.8%) |
Frame: 3 |
| Similar |
| Match: gi|76611177|ref|XP_881889.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 27.27% |
Span: 540bp (52.9%) |
Frame: 3 |
| gi|76611177|ref|XP_881889.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 9 [Bos taurus] |
| Match: gi|109477379|ref|XP_001064077.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 27.27% |
Span: 540bp (52.9%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|12653083|gb|AAH00307.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| RNA |
| Match: gi|75775098|gb|AAI04571.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|75775098|gb|AAI04571.1| Unknown (protein for MGC:128953) [Bos taurus] |
| Match: gi|73982924|ref|XP_865469.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|73982924|ref|XP_865469.1| PREDICTED: similar to RNA-binding protein 4 (RNA-binding motif protein 4) (Lark homolog)... |
| Match: gi|86438058|gb|AAI12498.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 28.11% |
Span: 726bp (71.2%) |
Frame: 3 |
| Similar |
| Match: gi|57105666|ref|XP_534706.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 28.72% |
Span: 525bp (51.5%) |
Frame: 3 |
| gi|57105666|ref|XP_534706.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 9 (Pre-mRNA splicing factor ... |
| Match: gi|109477367|ref|XP_001064632.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 27.27% |
Span: 540bp (52.9%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|109105251|ref|XP_001109416.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|55732548|emb|CAH92974.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|55732548|emb|CAH92974.1| hypothetical protein [Pongo pygmaeus] |
| Match: gi|76611169|ref|XP_870728.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 27.27% |
Span: 540bp (52.9%) |
Frame: 3 |
| gi|76611169|ref|XP_870728.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 1 [Bos taurus] |
| Match: gi|47940417|gb|AAH71513.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 28.03% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|47940417|gb|AAH71513.1| Unknown (protein for MGC:86885) [Danio rerio] |
| Match: gi|86262144|ref|NP_033058.2| |
score: 65.9 |
e-value: 3e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| RNA |
| Match: gi|7269003|emb|CAB80736.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 45.45% |
Span: 249bp (24.4%) |
Frame: 3 |
| gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana] >gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana] |
| Match: gi|109477369|ref|XP_001064569.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 27.16% |
Span: 675bp (66.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|40787678|gb|AAH64960.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 31.21% |
Span: 423bp (41.5%) |
Frame: 3 |
| gi|40787678|gb|AAH64960.1| Unknown (protein for MGC:75138) [Homo sapiens] |
| Match: gi|4506903|ref|NP_003760.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 28.99% |
Span: 525bp (51.5%) |
Frame: 3 |
| gi|4506903|ref|NP_003760.1| splicing factor, arginine/serine-rich 9 [Homo sapiens] gi|3929377|sp|Q13242|SFR9_HUMAN Sp... |
| Match: gi|52140009|gb|AAU29331.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 50% |
Span: 225bp (22.1%) |
Frame: 3 |
| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays] |
| Match: gi|30679138|ref|NP_849537.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 45.45% |
Span: 249bp (24.4%) |
Frame: 3 |
| gi|30679138|ref|NP_849537.1| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] gi|26451... |
| Match: gi|76658012|ref|XP_887098.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|76658012|ref|XP_887098.1| PREDICTED: similar to zinc responsive protein ZD7 isoform 4 [Bos taurus] |
| Match: gi|15126569|gb|AAH12217.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 28.99% |
Span: 525bp (51.5%) |
Frame: 3 |
| Splicing |
| Match: gi|50949475|emb|CAH10593.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 31.21% |
Span: 423bp (41.5%) |
Frame: 3 |
| gi|50949475|emb|CAH10593.1| hypothetical protein [Homo sapiens] >gi|18088917|gb|AAH21120.1| RBM4 protein [Homo sapiens] |
| Match: gi|52140010|gb|AAU29332.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 50% |
Span: 225bp (22.1%) |
Frame: 3 |
| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays] |
| Match: gi|55636419|ref|XP_508576.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 31.21% |
Span: 423bp (41.5%) |
Frame: 3 |
| gi|55636419|ref|XP_508576.1| PREDICTED: similar to RNA binding motif protein 14; coactivator activator; SYT interacti... |
| Match: gi|55636423|ref|XP_508578.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| gi|55636423|ref|XP_508578.1| PREDICTED: similar to RBM4-like protein [Pan troglodytes] |
| Match: gi|2078531|gb|AAC53171.1| |
score: 65.9 |
e-value: 3e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| Mlark |
| Match: gi|109459737|ref|XP_215201.4| |
score: 65.9 |
e-value: 3e-09 |
Identity: 29.3% |
Span: 471bp (46.2%) |
Frame: 3 |
| PREDICTED: |
|
| 227 lower scoring hits censored -- only 100 best hits are stored. |
