| arabidopsis/peptide [blastx] | Showing best 26 hits recorded |
| Match: At5G44200.1 |
score: 288 |
e-value: 3e-78 |
Identity: 73% |
Span: 705bp (66.5%) |
Frame: 1 |
| Symbols: ATCBP20, CBP20 | CBP20 (CAP-BINDING PROTEIN 20); RNA binding | chr5:17819289-17821102 REVERSE |
| Match: At3G46020.1 |
score: 56.6 |
e-value: 2e-08 |
Identity: 38.16% |
Span: 228bp (21.5%) |
Frame: 1 |
| RNA-binding protein, putative | chr3:16923496-16924235 REVERSE |
| Match: At1G66260.1 |
score: 52.8 |
e-value: 4e-07 |
Identity: 32.43% |
Span: 222bp (20.9%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr1:24699558-24701546 REVERSE |
| Match: At5G64200.1 |
score: 52 |
e-value: 6e-07 |
Identity: 30.67% |
Span: 225bp (21.2%) |
Frame: 1 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At5G64200.2 |
score: 52 |
e-value: 6e-07 |
Identity: 30.67% |
Span: 225bp (21.2%) |
Frame: 1 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At3G10400.1 |
score: 52 |
e-value: 6e-07 |
Identity: 30.14% |
Span: 219bp (20.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:3232641-3233426 FORWARD |
| Match: At5G06210.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 32.43% |
Span: 222bp (20.9%) |
Frame: 1 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At5G37720.1 |
score: 50.8 |
e-value: 1e-06 |
Identity: 34.25% |
Span: 219bp (20.7%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:14999035-15001208 REVERSE |
| Match: At2G27330.1 |
score: 50.8 |
e-value: 1e-06 |
Identity: 30.26% |
Span: 228bp (21.5%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr2:11702428-11703641 REVERSE |
| Match: At1G73530.1 |
score: 49.7 |
e-value: 3e-06 |
Identity: 32.88% |
Span: 219bp (20.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr1:27647462-27649047 REVERSE |
| Match: At2G18510.1 |
score: 49.3 |
e-value: 4e-06 |
Identity: 33.78% |
Span: 222bp (20.9%) |
Frame: 1 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At2G37220.1 |
score: 48.9 |
e-value: 5e-06 |
Identity: 34.72% |
Span: 216bp (20.4%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At3G20930.1 |
score: 48.1 |
e-value: 9e-06 |
Identity: 29.09% |
Span: 330bp (31.1%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:7331745-7333755 FORWARD |
| Match: At2G23350.1 |
score: 47.4 |
e-value: 1e-05 |
Identity: 25.33% |
Span: 225bp (21.2%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At2G37220.1 |
score: 47 |
e-value: 2e-05 |
Identity: 29.27% |
Span: 246bp (23.2%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At4G13860.1 |
score: 46.2 |
e-value: 3e-05 |
Identity: 34.72% |
Span: 216bp (20.4%) |
Frame: 1 |
| glycine-rich RNA-binding protein, putative | chr4:8022597-8023158 FORWARD |
| Match: At4G20030.1 |
score: 45.4 |
e-value: 6e-05 |
Identity: 30.53% |
Span: 285bp (26.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr4:10846372-10847256 FORWARD |
| Match: At3G47120.1 |
score: 45.4 |
e-value: 6e-05 |
Identity: 29.13% |
Span: 309bp (29.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:17362319-17363754 REVERSE |
| Match: At5G59950.3 |
score: 45.1 |
e-value: 7e-05 |
Identity: 27.4% |
Span: 219bp (20.7%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:24157461-24158730 FORWARD |
| Match: At5G59950.1 |
score: 45.1 |
e-value: 7e-05 |
Identity: 27.4% |
Span: 219bp (20.7%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:24157461-24158730 FORWARD |
| Match: At1G16610.1 |
score: 45.1 |
e-value: 7e-05 |
Identity: 23.6% |
Span: 267bp (25.2%) |
Frame: 1 |
| Symbols: SR45 | SR45 (arginine/serine-rich 45); RNA binding | chr1:5675918-5678679 REVERSE |
| Match: At5G59950.2 |
score: 45.1 |
e-value: 7e-05 |
Identity: 27.4% |
Span: 219bp (20.7%) |
Frame: 1 |
| RNA and export factor-binding protein, putative | chr5:24157855-24158730 FORWARD |
| Match: At1G16610.2 |
score: 45.1 |
e-value: 7e-05 |
Identity: 23.6% |
Span: 267bp (25.2%) |
Frame: 1 |
| Symbols: SR45 | SR45 (arginine/serine-rich 45); RNA binding | chr1:5675918-5678679 REVERSE |
| Match: At3G11400.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 29.33% |
Span: 225bp (21.2%) |
Frame: 1 |
| Symbols: ATEIF3G1, EIF3G1 | EIF3G1 (eukaryotic translation initiation factor 3G1); RNA binding / translation initiat... |
| Match: At3G52150.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 28.77% |
Span: 219bp (20.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At3G52150.2 |
score: 44.7 |
e-value: 0.0001 |
Identity: 28.77% |
Span: 219bp (20.7%) |
Frame: 1 |
| RNA binding | chr3:19353052-19354068 FORWARD |
|
| 106 lower scoring hits censored -- only 26 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15241430|ref|NP_199233.1| |
score: 288 |
e-value: 2e-76 |
Identity: 73% |
Span: 705bp (66.5%) |
Frame: 1 |
| CBP20 (CAP-BINDING PROTEIN 20); RNA binding / RNA cap binding [Arabidopsis thaliana] >gi145334719|ref|NP_001078705.1|... |
| Match: gi|50910401|ref|XP_466689.1| |
score: 274 |
e-value: 6e-72 |
Identity: 83.91% |
Span: 522bp (49.2%) |
Frame: 1 |
| gi|50910401|ref|XP_466689.1| cap-binding protein CBP20 [Oryza sativa (japonica cultivar-group)] >gi|51979267|ref|XP_5... |
| Match: gi|46949206|gb|AAT07459.1| |
score: 246 |
e-value: 1e-63 |
Identity: 88.44% |
Span: 441bp (41.6%) |
Frame: 1 |
| cap-binding protein [Mirabilis jalapa] |
| Match: gi|91083353|ref|XP_975066.1| |
score: 181 |
e-value: 5e-44 |
Identity: 60.93% |
Span: 453bp (42.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|13386056|ref|NP_080830.1| |
score: 181 |
e-value: 7e-44 |
Identity: 69.5% |
Span: 423bp (39.9%) |
Frame: 1 |
| gi|13386056|ref|NP_080830.1| nuclear cap binding protein subunit 2; nuclear cap binding protein subunit 2, 20kDa [Mus... |
| Match: gi|1060899|dbj|BAA09599.1| |
score: 180 |
e-value: 1e-43 |
Identity: 69.5% |
Span: 423bp (39.9%) |
Frame: 1 |
| gi|1060899|dbj|BAA09599.1| NCBP interacting protein 1 [Homo sapiens] |
| Match: gi|30583899|gb|AAP36198.1| |
score: 180 |
e-value: 8e-44 |
Identity: 69.01% |
Span: 426bp (40.2%) |
Frame: 1 |
| gi|30583899|gb|AAP36198.1| Homo sapiens nuclear cap binding protein subunit 2, 20kDa [synthetic construct] |
| Match: gi|66807277|ref|XP_637361.1| |
score: 179 |
e-value: 2e-43 |
Identity: 67.63% |
Span: 417bp (39.3%) |
Frame: 1 |
| gi|66807277|ref|XP_637361.1| hypothetical protein DDB0218899 [Dictyostelium discoideum] >gi|60465797|gb|EAL63873.1| h... |
| Match: gi|19923387|ref|NP_031388.2| |
score: 179 |
e-value: 2e-43 |
Identity: 68.79% |
Span: 423bp (39.9%) |
Frame: 1 |
| gi|19923387|ref|NP_031388.2| nuclear cap binding protein subunit 2, 20kDa; NCBP interacting protein 1 [Homo sapiens] ... |
| Match: gi|95115190|gb|ABF55961.1| |
score: 177 |
e-value: 7e-43 |
Identity: 63.38% |
Span: 426bp (40.2%) |
Frame: 1 |
| Cbp20 |
| Match: gi|108878082|gb|EAT42307.1| |
score: 175 |
e-value: 3e-42 |
Identity: 63.51% |
Span: 444bp (41.9%) |
Frame: 1 |
| 20 |
| Match: gi|48142250|ref|XP_397316.1| |
score: 174 |
e-value: 6e-42 |
Identity: 62.68% |
Span: 426bp (40.2%) |
Frame: 1 |
| gi|48142250|ref|XP_397316.1| similar to CG12357-PA [Apis mellifera] |
| Match: gi|5763573|emb|CAB53185.1| |
score: 173 |
e-value: 1e-41 |
Identity: 63.38% |
Span: 426bp (40.2%) |
Frame: 1 |
| cap |
| Match: gi|55242220|gb|EAA07524.2| |
score: 172 |
e-value: 3e-41 |
Identity: 65.94% |
Span: 414bp (39.1%) |
Frame: 1 |
| gi|55242220|gb|EAA07524.2| ENSANGP00000012757 [Anopheles gambiae str. PEST] >gi|58383094|ref|XP_312392.2| ENSANGP0000... |
| Match: gi|55621796|ref|XP_516977.1| |
score: 172 |
e-value: 2e-41 |
Identity: 69.63% |
Span: 405bp (38.2%) |
Frame: 1 |
| gi|55621796|ref|XP_516977.1| PREDICTED: similar to Nuclear cap binding protein subunit 2 (20 kDa nuclear cap binding ... |
| Match: gi|54639706|gb|EAL29108.1| |
score: 172 |
e-value: 2e-41 |
Identity: 63.38% |
Span: 426bp (40.2%) |
Frame: 1 |
| gi|54639706|gb|EAL29108.1| GA11577-PA [Drosophila pseudoobscura] |
| Match: gi|72067816|ref|XP_802051.1| |
score: 172 |
e-value: 2e-41 |
Identity: 58.82% |
Span: 459bp (43.3%) |
Frame: 1 |
| gi|72067816|ref|XP_802051.1| PREDICTED: similar to nuclear cap binding protein subunit 2 isoform 2 [Strongylocentrotu... |
| Match: gi|50752243|ref|XP_422700.1| |
score: 171 |
e-value: 5e-41 |
Identity: 67.39% |
Span: 414bp (39.1%) |
Frame: 1 |
| gi|50752243|ref|XP_422700.1| PREDICTED: similar to Nuclear cap binding protein subunit 2 (20 kDa nuclear cap binding ... |
| Match: gi|53733381|gb|AAH83529.1| |
score: 171 |
e-value: 7e-41 |
Identity: 61.49% |
Span: 441bp (41.6%) |
Frame: 1 |
| gi|53733381|gb|AAH83529.1| Ncbp2 protein [Danio rerio] |
| Match: gi|94732954|emb|CAK04823.1| |
score: 171 |
e-value: 5e-41 |
Identity: 62.16% |
Span: 441bp (41.6%) |
Frame: 1 |
| nuclear |
| Match: gi|55742232|ref|NP_001006879.1| |
score: 170 |
e-value: 1e-40 |
Identity: 65.47% |
Span: 417bp (39.3%) |
Frame: 1 |
| nuclear |
| Match: gi|27545255|ref|NP_775356.1| |
score: 169 |
e-value: 3e-40 |
Identity: 61.49% |
Span: 441bp (41.6%) |
Frame: 1 |
| gi|27545255|ref|NP_775356.1| nuclear cap binding protein subunit 2, 20kD [Danio rerio] gi|20977581|gb|AAM28218.1| nuc... |
| Match: gi|109494447|ref|XP_001066197.1| |
score: 169 |
e-value: 2e-40 |
Identity: 71.54% |
Span: 390bp (36.8%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|53130698|emb|CAG31678.1| |
score: 169 |
e-value: 2e-40 |
Identity: 61.07% |
Span: 447bp (42.2%) |
Frame: 1 |
| gi|53130698|emb|CAG31678.1| hypothetical protein [Gallus gallus] >gi|57530195|ref|NP_001006430.1| hypothetical protei... |
| Match: gi|49117075|gb|AAH72902.1| |
score: 169 |
e-value: 3e-40 |
Identity: 64.49% |
Span: 414bp (39.1%) |
Frame: 1 |
| gi|49117075|gb|AAH72902.1| Unknown (protein for MGC:80352) [Xenopus laevis] |
| Match: gi|984260|emb|CAA59259.1| |
score: 166 |
e-value: 2e-39 |
Identity: 63.77% |
Span: 414bp (39.1%) |
Frame: 1 |
| gi|984260|emb|CAA59259.1| CAP binding protein [Xenopus laevis] >gi|1705652|sp|P52299|NCBP2_XENLA Nuclear cap binding ... |
| Match: gi|3876384|emb|CAB01702.1| |
score: 163 |
e-value: 1e-38 |
Identity: 60.28% |
Span: 423bp (39.9%) |
Frame: 1 |
| gi|3876384|emb|CAB01702.1| Hypothetical protein F26A3.2 [Caenorhabditis elegans] >gi|17506843|ref|NP_492130.1| F26A3.... |
| Match: gi|47211818|emb|CAF95006.1| |
score: 162 |
e-value: 2e-38 |
Identity: 63.31% |
Span: 417bp (39.3%) |
Frame: 1 |
| gi|47211818|emb|CAF95006.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|90305852|gb|EAS35483.1| |
score: 160 |
e-value: 9e-38 |
Identity: 55.62% |
Span: 501bp (47.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|39589424|emb|CAE74453.1| |
score: 160 |
e-value: 1e-37 |
Identity: 60% |
Span: 420bp (39.6%) |
Frame: 1 |
| gi|39589424|emb|CAE74453.1| Hypothetical protein CBG22194 [Caenorhabditis briggsae] |
| Match: gi|111061743|gb|EAT82863.1| |
score: 155 |
e-value: 2e-36 |
Identity: 67.46% |
Span: 378bp (35.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|71001020|ref|XP_755191.1| |
score: 155 |
e-value: 2e-36 |
Identity: 62.5% |
Span: 408bp (38.5%) |
Frame: 1 |
| small |
| Match: gi|46122221|ref|XP_385664.1| |
score: 152 |
e-value: 2e-35 |
Identity: 62.5% |
Span: 408bp (38.5%) |
Frame: 1 |
| gi|46122221|ref|XP_385664.1| hypothetical protein FG05488.1 [Gibberella zeae PH-1] >gi|42550978|gb|EAA73821.1| hypoth... |
| Match: gi|9453827|emb|CAB99394.1| |
score: 149 |
e-value: 2e-34 |
Identity: 55.62% |
Span: 480bp (45.3%) |
Frame: 1 |
| gi|9453827|emb|CAB99394.1| SPBC13A2.01c [Schizosaccharomyces pombe] >gi|19113206|ref|NP_596414.1| hypothetical protei... |
| Match: gi|71021555|ref|XP_761008.1| |
score: 145 |
e-value: 4e-33 |
Identity: 49.69% |
Span: 471bp (44.4%) |
Frame: 1 |
| gi|71021555|ref|XP_761008.1| hypothetical protein UM04861.1 [Ustilago maydis 521] >gi|46100928|gb|EAK86161.1| hypothe... |
| Match: gi|88183952|gb|EAQ91420.1| |
score: 142 |
e-value: 2e-32 |
Identity: 63.49% |
Span: 378bp (35.7%) |
Frame: 1 |
| conserved |
| Match: gi|50256034|gb|EAL18762.1| |
score: 136 |
e-value: 2e-30 |
Identity: 48.68% |
Span: 510bp (48.1%) |
Frame: 1 |
| gi|50256034|gb|EAL18762.1| hypothetical protein CNBI2540 [Cryptococcus neoformans var. neoformans B-3501A] |
| Match: gi|15988386|pdb|1H6K|Z |
score: 134 |
e-value: 9e-30 |
Identity: 65.31% |
Span: 294bp (27.7%) |
Frame: 1 |
| gi|15988386|pdb|1H6K|Z Chain Z, Nuclear Cap Binding Complex gi|20151224|pdb|1H6K|X Chain X, Nuclear Cap Binding Compl... |
| Match: gi|49524545|emb|CAG58147.1| |
score: 125 |
e-value: 2e-27 |
Identity: 60.53% |
Span: 342bp (32.3%) |
Frame: 1 |
| unnamed |
| Match: gi|6325079|ref|NP_015147.1| |
score: 125 |
e-value: 2e-27 |
Identity: 55.12% |
Span: 381bp (35.9%) |
Frame: 1 |
| gi|6325079|ref|NP_015147.1| cap binding complex; Cbc2p [Saccharomyces cerevisiae] gi|2132220|pir||S65190 hypothetical... |
| Match: gi|50304093|ref|XP_451996.1| |
score: 125 |
e-value: 3e-27 |
Identity: 61.06% |
Span: 339bp (32.0%) |
Frame: 1 |
| gi|50304093|ref|XP_451996.1| unnamed protein product [Kluyveromyces lactis] >gi|49641128|emb|CAH02389.1| unnamed prot... |
| Match: gi|44984420|gb|AAS53322.1| |
score: 124 |
e-value: 9e-27 |
Identity: 55.91% |
Span: 381bp (35.9%) |
Frame: 1 |
| gi|44984420|gb|AAS53322.1| AFL050Wp [Ashbya gossypii ATCC 10895] >gi|45198469|ref|NP_985498.1| AFL050Wp [Eremothecium... |
| Match: gi|67539944|ref|XP_663746.1| |
score: 123 |
e-value: 1e-26 |
Identity: 52.08% |
Span: 408bp (38.5%) |
Frame: 1 |
| gi|67539944|ref|XP_663746.1| hypothetical protein AN6142.2 [Aspergillus nidulans FGSC A4] >gi|40738738|gb|EAA57928.1|... |
| Match: gi|109131846|ref|XP_001091350.1| |
score: 122 |
e-value: 4e-26 |
Identity: 50.68% |
Span: 435bp (41.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|85080737|ref|XP_956595.1| |
score: 122 |
e-value: 3e-26 |
Identity: 67.65% |
Span: 306bp (28.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|62359293|gb|AAX79735.1| |
score: 119 |
e-value: 3e-25 |
Identity: 46.82% |
Span: 480bp (45.3%) |
Frame: 1 |
| gi|62359293|gb|AAX79735.1| nuclear cap binding protein, putative [Trypanosoma brucei] >gi|70801853|gb|AAZ11759.1| nuc... |
| Match: gi|57230062|gb|AAW46463.1| |
score: 116 |
e-value: 2e-24 |
Identity: 50% |
Span: 423bp (39.9%) |
Frame: 1 |
| gi|57230062|gb|AAW46463.1| 20 kda nuclear cap binding protein (ncbp), putative [Cryptococcus neoformans var. neoforma... |
| Match: gi|89287403|gb|EAR85394.1| |
score: 115 |
e-value: 3e-24 |
Identity: 44.38% |
Span: 504bp (47.5%) |
Frame: 1 |
| nuclear |
| Match: gi|23498221|emb|CAD49192.1| |
score: 114 |
e-value: 1e-23 |
Identity: 42.86% |
Span: 420bp (39.6%) |
Frame: 1 |
| nuclear |
| Match: gi|70946005|ref|XP_742761.1| |
score: 112 |
e-value: 4e-23 |
Identity: 42.86% |
Span: 420bp (39.6%) |
Frame: 1 |
| gi|70946005|ref|XP_742761.1| nuclear cap-binding protein, putative [Plasmodium chabaudi] >gi|56521923|emb|CAH80634.1|... |
| Match: gi|55663974|ref|XP_529095.1| |
score: 110 |
e-value: 1e-22 |
Identity: 53.91% |
Span: 381bp (35.9%) |
Frame: 1 |
| gi|55663974|ref|XP_529095.1| PREDICTED: similar to dJ820B18.1 (similar to nuclear cap binding protein) [Pan troglodyt... |
| Match: gi|71033685|ref|XP_766484.1| |
score: 109 |
e-value: 2e-22 |
Identity: 37.27% |
Span: 477bp (45.0%) |
Frame: 1 |
| nuclear |
| Match: gi|24954104|gb|AAN64583.1| |
score: 108 |
e-value: 4e-22 |
Identity: 43.15% |
Span: 432bp (40.8%) |
Frame: 1 |
| gi|24954104|gb|AAN64583.1| RNA-binding protein [Babesia bovis] |
| Match: gi|68075801|ref|XP_679820.1| |
score: 107 |
e-value: 1e-21 |
Identity: 40.71% |
Span: 420bp (39.6%) |
Frame: 1 |
| gi|68075801|ref|XP_679820.1| nuclear cap-binding protein, putative [Plasmodium berghei] >gi|56500646|emb|CAH95740.1| ... |
| Match: gi|71416346|ref|XP_810208.1| |
score: 107 |
e-value: 1e-21 |
Identity: 42.77% |
Span: 480bp (45.3%) |
Frame: 1 |
| gi|71416346|ref|XP_810208.1| nuclear cap binding protein, putative [Trypanosoma cruzi] >gi|70874706|gb|EAN88357.1| nu... |
| Match: gi|65304807|emb|CAI73132.1| |
score: 107 |
e-value: 9e-22 |
Identity: 37.5% |
Span: 474bp (44.7%) |
Frame: 1 |
| gi|65304807|emb|CAI73132.1| RNA binding protein, putative [Theileria annulata] |
| Match: gi|31873246|emb|CAD97614.1| |
score: 105 |
e-value: 3e-21 |
Identity: 64% |
Span: 225bp (21.2%) |
Frame: 1 |
| gi|31873246|emb|CAD97614.1| hypothetical protein [Homo sapiens] |
| Match: gi|68484939|ref|XP_713608.1| |
score: 105 |
e-value: 5e-21 |
Identity: 46.05% |
Span: 438bp (41.3%) |
Frame: 1 |
| spliceosome |
| Match: gi|17736768|emb|CAD19101.1| |
score: 105 |
e-value: 3e-21 |
Identity: 49.51% |
Span: 309bp (29.2%) |
Frame: 1 |
| gi|17736768|emb|CAD19101.1| dJ820B18.1 (similar to nuclear cap binding protein) [Homo sapiens] |
| Match: gi|39976787|ref|XP_369781.1| |
score: 103 |
e-value: 2e-20 |
Identity: 66.67% |
Span: 270bp (25.5%) |
Frame: 1 |
| gi|39976787|ref|XP_369781.1| hypothetical protein MG06296.4 [Magnaporthe grisea 70-15] |
| Match: gi|68127714|emb|CAJ05923.1| |
score: 102 |
e-value: 3e-20 |
Identity: 47.3% |
Span: 417bp (39.3%) |
Frame: 1 |
| gi|68127714|emb|CAJ05923.1| nuclear cap binding protein, putative [Leishmania major] |
| Match: gi|19173034|ref|NP_597585.1| |
score: 99.4 |
e-value: 2e-19 |
Identity: 44% |
Span: 300bp (28.3%) |
Frame: 1 |
| gi|19173034|ref|NP_597585.1| similarity to 20kDa NUCLEAR CAP BINDING PROTEIN [Encephalitozoon cuniculi] gi|19168701|e... |
| Match: gi|32398753|emb|CAD98713.1| |
score: 96.3 |
e-value: 2e-18 |
Identity: 42.96% |
Span: 420bp (39.6%) |
Frame: 1 |
| gi|32398753|emb|CAD98713.1| nuclear cap-binding protein, possible [Cryptosporidium parvum] |
| Match: gi|60697677|gb|AAX30911.1| |
score: 95.5 |
e-value: 4e-18 |
Identity: 67.05% |
Span: 264bp (24.9%) |
Frame: 1 |
| gi|60697677|gb|AAX30911.1| SJCHGC08688 protein [Schistosoma japonicum] |
| Match: gi|49654249|emb|CAG86716.1| |
score: 95.1 |
e-value: 5e-18 |
Identity: 49.37% |
Span: 237bp (22.4%) |
Frame: 1 |
| unnamed |
| Match: gi|67601215|ref|XP_666381.1| |
score: 94.7 |
e-value: 6e-18 |
Identity: 42.25% |
Span: 420bp (39.6%) |
Frame: 1 |
| nuclear |
| Match: gi|50554271|ref|XP_504544.1| |
score: 90.9 |
e-value: 9e-17 |
Identity: 65.43% |
Span: 243bp (22.9%) |
Frame: 1 |
| gi|50554271|ref|XP_504544.1| hypothetical protein [Yarrowia lipolytica] >gi|49650413|emb|CAG80148.1| unnamed protein ... |
| Match: gi|67474332|ref|XP_652915.1| |
score: 78.2 |
e-value: 6e-13 |
Identity: 38% |
Span: 300bp (28.3%) |
Frame: 1 |
| RNA-binding |
| Match: gi|83315320|ref|XP_730743.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 44.94% |
Span: 267bp (25.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|110349727|ref|NP_001036005.1| |
score: 70.5 |
e-value: 1e-10 |
Identity: 73.02% |
Span: 189bp (17.8%) |
Frame: 1 |
| nuclear |
| Match: gi|49525136|emb|CAG58749.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 31.53% |
Span: 333bp (31.4%) |
Frame: 1 |
| unnamed |
| Match: gi|50260672|gb|EAL23325.1| |
score: 65.1 |
e-value: 5e-09 |
Identity: 37.33% |
Span: 225bp (21.2%) |
Frame: 1 |
| gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var. neoformans B-3501A] |
| Match: gi|57222972|gb|AAW41016.1| |
score: 65.1 |
e-value: 5e-09 |
Identity: 37.33% |
Span: 225bp (21.2%) |
Frame: 1 |
| gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus neoformans var. neoformans JEC... |
| Match: gi|12580702|emb|CAC27020.1| |
score: 64.3 |
e-value: 9e-09 |
Identity: 38.27% |
Span: 243bp (22.9%) |
Frame: 1 |
| nuclear |
| Match: gi|6321599|ref|NP_011675.1| |
score: 62 |
e-value: 4e-08 |
Identity: 29.47% |
Span: 285bp (26.9%) |
Frame: 1 |
| gi|6321599|ref|NP_011675.1| nuclear localization sequence binding protein; Nsr1p [Saccharomyces cerevisiae] gi|128576... |
| Match: gi|253181|gb|AAB22809.1| |
score: 62 |
e-value: 4e-08 |
Identity: 29.47% |
Span: 285bp (26.9%) |
Frame: 1 |
| gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa] |
| Match: gi|62857699|ref|NP_001017228.1| |
score: 61.6 |
e-value: 6e-08 |
Identity: 36.99% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|62857699|ref|NP_001017228.1| hypothetical protein LOC549982 [Xenopus tropicalis] |
| Match: gi|32450232|gb|AAH54250.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis] >gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding pr... |
| Match: gi|67537390|ref|XP_662469.1| |
score: 60.1 |
e-value: 2e-07 |
Identity: 37.66% |
Span: 231bp (21.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|28173040|gb|AAO32675.1| |
score: 59.7 |
e-value: 2e-07 |
Identity: 39.73% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar] |
| Match: gi|44984635|gb|AAS53478.1| |
score: 59.3 |
e-value: 3e-07 |
Identity: 32.47% |
Span: 231bp (21.8%) |
Frame: 1 |
| gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895] >gi|45198625|ref|NP_985654.1| AFR107Wp [Eremothecium... |
| Match: gi|46019691|emb|CAD67988.1| |
score: 59.3 |
e-value: 3e-07 |
Identity: 35.78% |
Span: 309bp (29.2%) |
Frame: 1 |
| gi|46019691|emb|CAD67988.1| transformer-2 protein [Bactrocera oleae] |
| Match: gi|30585341|gb|AAP36943.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic construct] |
| Match: gi|73987338|ref|XP_868602.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|73987338|ref|XP_868602.1| PREDICTED: similar to cold inducible RNA binding protein isoform 4 [Canis familiaris] |
| Match: gi|74353851|gb|AAI02774.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|74353851|gb|AAI02774.1| MGC127049 protein [Bos taurus] >gi|77735511|ref|NP_001029450.1| hypothetical protein LOC50... |
| Match: gi|4502847|ref|NP_001271.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|4502847|ref|NP_001271.1| cold inducible RNA binding protein; cold inducible RNA-binding protein; glycine-rich RNA ... |
| Match: gi|73987336|ref|XP_868601.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|73987336|ref|XP_868601.1| PREDICTED: similar to cold inducible RNA binding protein isoform 3 [Canis familiaris] |
| Match: gi|109122725|ref|XP_001094149.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|71000291|ref|XP_754840.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 37.66% |
Span: 231bp (21.8%) |
Frame: 1 |
| nucleolin |
| Match: gi|71668509|gb|AAZ38826.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus] |
| Match: gi|57101492|ref|XP_533961.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|57101492|ref|XP_533961.1| PREDICTED: similar to cold inducible RNA binding protein isoform 1 [Canis familiaris] |
| Match: gi|83773473|dbj|BAE63600.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 32.53% |
Span: 249bp (23.5%) |
Frame: 1 |
| unnamed |
| Match: gi|71897051|ref|NP_001026518.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|71897051|ref|NP_001026518.1| cold inducible RNA binding protein [Gallus gallus] >gi|53128363|emb|CAG31295.1| hypot... |
| Match: gi|83753630|pdb|1X5S|A |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| Chain |
| Match: gi|73987334|ref|XP_868600.1| |
score: 58.5 |
e-value: 5e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|73987334|ref|XP_868600.1| PREDICTED: similar to cold inducible RNA binding protein isoform 2 [Canis familiaris] |
| Match: gi|17862504|gb|AAL39729.1| |
score: 58.2 |
e-value: 6e-07 |
Identity: 33.78% |
Span: 222bp (20.9%) |
Frame: 1 |
| LD32469p |
| Match: gi|46623308|gb|AAH69219.1| |
score: 58.2 |
e-value: 6e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus] >gi|47271546|ref|NP_112409.2| cold ... |
| Match: gi|49522692|gb|AAH75699.1| |
score: 58.2 |
e-value: 6e-07 |
Identity: 35.62% |
Span: 219bp (20.7%) |
Frame: 1 |
| Cold |
| Match: gi|20975276|dbj|BAB92955.1| |
score: 58.2 |
e-value: 6e-07 |
Identity: 31.19% |
Span: 327bp (30.8%) |
Frame: 1 |
| gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica] |
| Match: gi|50305507|ref|XP_452713.1| |
score: 57.8 |
e-value: 8e-07 |
Identity: 29.47% |
Span: 285bp (26.9%) |
Frame: 1 |
| unnamed |
|
| 158 lower scoring hits censored -- only 100 best hits are stored. |
