| arabidopsis/peptide [blastx] | Showing best 14 hits recorded |
| Match: At4G25500.2 |
score: 124 |
e-value: 3e-32 |
Identity: 56.29% |
Span: 450bp (42.3%) |
Frame: 3 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At4G25500.1 |
score: 124 |
e-value: 1e-51 |
Identity: 56.29% |
Span: 450bp (42.3%) |
Frame: 3 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At5G52040.1 |
score: 122 |
e-value: 1e-50 |
Identity: 55.56% |
Span: 459bp (43.1%) |
Frame: 3 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At5G52040.2 |
score: 122 |
e-value: 1e-50 |
Identity: 55.56% |
Span: 459bp (43.1%) |
Frame: 3 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At3G61860.1 |
score: 120 |
e-value: 9e-46 |
Identity: 49.7% |
Span: 489bp (45.9%) |
Frame: 3 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At2G46610.1 |
score: 110 |
e-value: 1e-39 |
Identity: 53.33% |
Span: 270bp (25.4%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At2G46610.2 |
score: 110 |
e-value: 2e-26 |
Identity: 53.33% |
Span: 270bp (25.4%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At4G25500.1 |
score: 97.8 |
e-value: 1e-51 |
Identity: 78.08% |
Span: 219bp (20.6%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At5G52040.1 |
score: 95.9 |
e-value: 1e-50 |
Identity: 76.71% |
Span: 219bp (20.6%) |
Frame: 2 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At5G52040.2 |
score: 95.9 |
e-value: 1e-50 |
Identity: 76.71% |
Span: 219bp (20.6%) |
Frame: 2 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At3G61860.1 |
score: 81.6 |
e-value: 9e-46 |
Identity: 67.57% |
Span: 222bp (20.8%) |
Frame: 2 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At2G46610.1 |
score: 71.6 |
e-value: 1e-39 |
Identity: 60.27% |
Span: 219bp (20.6%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At4G25500.2 |
score: 33.1 |
e-value: 3e-32 |
Identity: 92.86% |
Span: 42bp (3.9%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At2G46610.2 |
score: 27.3 |
e-value: 2e-26 |
Identity: 61.54% |
Span: 117bp (11.0%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
|
| 35 lower scoring hits censored -- only 14 best hits are stored. |
| genbank/nr [blastx] | Showing best 64 hits recorded |
| Match: gi|41323931|gb|AAS00039.1| |
score: 143 |
e-value: 2e-57 |
Identity: 64.02% |
Span: 492bp (46.2%) |
Frame: 3 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|1667582|gb|AAB18813.1| |
score: 124 |
e-value: 3e-48 |
Identity: 55.63% |
Span: 450bp (42.3%) |
Frame: 3 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 124 |
e-value: 1e-49 |
Identity: 56.29% |
Span: 450bp (42.3%) |
Frame: 3 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|42573039|ref|NP_974616.1| |
score: 124 |
e-value: 2e-30 |
Identity: 56.29% |
Span: 450bp (42.3%) |
Frame: 3 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|50921405|ref|XP_471063.1| |
score: 124 |
e-value: 4e-44 |
Identity: 64.44% |
Span: 270bp (25.4%) |
Frame: 3 |
| gi|50921405|ref|XP_471063.1| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] >gi|38344865|emb|CAE01291.2| OS... |
| Match: gi|50904881|ref|XP_463929.1| |
score: 122 |
e-value: 2e-49 |
Identity: 55.76% |
Span: 495bp (46.5%) |
Frame: 3 |
| gi|50904881|ref|XP_463929.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa (japonica cultivar-gro... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 122 |
e-value: 1e-48 |
Identity: 55.56% |
Span: 459bp (43.1%) |
Frame: 3 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 122 |
e-value: 1e-48 |
Identity: 55.56% |
Span: 459bp (43.1%) |
Frame: 3 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|7269400|emb|CAB81360.1| |
score: 122 |
e-value: 3e-49 |
Identity: 55.63% |
Span: 450bp (42.3%) |
Frame: 3 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|1707370|emb|CAA67799.1| |
score: 121 |
e-value: 2e-48 |
Identity: 54.9% |
Span: 459bp (43.1%) |
Frame: 3 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|1707366|emb|CAA67798.1| |
score: 120 |
e-value: 1e-43 |
Identity: 49.7% |
Span: 489bp (45.9%) |
Frame: 3 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 120 |
e-value: 7e-44 |
Identity: 49.7% |
Span: 489bp (45.9%) |
Frame: 3 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|6899884|emb|CAB71893.1| |
score: 120 |
e-value: 7e-44 |
Identity: 49.7% |
Span: 489bp (45.9%) |
Frame: 3 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|47680295|gb|AAT37131.1| |
score: 113 |
e-value: 5e-40 |
Identity: 45.12% |
Span: 492bp (46.2%) |
Frame: 3 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 111 |
e-value: 3e-39 |
Identity: 63.29% |
Span: 237bp (22.3%) |
Frame: 3 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|47680309|gb|AAT37138.1| |
score: 111 |
e-value: 2e-38 |
Identity: 63.29% |
Span: 237bp (22.3%) |
Frame: 3 |
| gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays] >gi|47680375|gb|AAT37129.1| ar... |
| Match: gi|42571257|ref|NP_973702.1| |
score: 110 |
e-value: 1e-24 |
Identity: 53.33% |
Span: 270bp (25.4%) |
Frame: 3 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
| Match: gi|15226019|ref|NP_182184.1| |
score: 110 |
e-value: 8e-38 |
Identity: 53.33% |
Span: 270bp (25.4%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|41323931|gb|AAS00039.1| |
score: 103 |
e-value: 2e-57 |
Identity: 84.93% |
Span: 219bp (20.6%) |
Frame: 2 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|50904881|ref|XP_463929.1| |
score: 98.6 |
e-value: 2e-49 |
Identity: 80.82% |
Span: 219bp (20.6%) |
Frame: 2 |
| gi|50904881|ref|XP_463929.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa (japonica cultivar-gro... |
| Match: gi|7269400|emb|CAB81360.1| |
score: 98.2 |
e-value: 3e-49 |
Identity: 78.08% |
Span: 219bp (20.6%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 97.8 |
e-value: 1e-49 |
Identity: 78.08% |
Span: 219bp (20.6%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|30696138|ref|NP_851174.1| |
score: 95.9 |
e-value: 1e-48 |
Identity: 76.71% |
Span: 219bp (20.6%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|1707370|emb|CAA67799.1| |
score: 95.9 |
e-value: 2e-48 |
Identity: 76.71% |
Span: 219bp (20.6%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|30696140|ref|NP_200017.2| |
score: 95.9 |
e-value: 1e-48 |
Identity: 76.71% |
Span: 219bp (20.6%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|6759507|emb|CAB69816.1| |
score: 94.7 |
e-value: 6e-18 |
Identity: 58.33% |
Span: 216bp (20.3%) |
Frame: 3 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|1667582|gb|AAB18813.1| |
score: 93.2 |
e-value: 3e-48 |
Identity: 73.97% |
Span: 219bp (20.6%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 81.6 |
e-value: 7e-44 |
Identity: 67.57% |
Span: 222bp (20.8%) |
Frame: 2 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|6899884|emb|CAB71893.1| |
score: 81.6 |
e-value: 7e-44 |
Identity: 67.57% |
Span: 222bp (20.8%) |
Frame: 2 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|1707366|emb|CAA67798.1| |
score: 80.5 |
e-value: 1e-43 |
Identity: 66.22% |
Span: 222bp (20.8%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|50921405|ref|XP_471063.1| |
score: 79 |
e-value: 4e-44 |
Identity: 62.16% |
Span: 222bp (20.8%) |
Frame: 2 |
| gi|50921405|ref|XP_471063.1| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] >gi|38344865|emb|CAE01291.2| OS... |
| Match: gi|47680295|gb|AAT37131.1| |
score: 76.3 |
e-value: 5e-40 |
Identity: 60.81% |
Span: 222bp (20.8%) |
Frame: 2 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 75.1 |
e-value: 3e-39 |
Identity: 59.46% |
Span: 222bp (20.8%) |
Frame: 2 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|47680309|gb|AAT37138.1| |
score: 72.8 |
e-value: 2e-38 |
Identity: 58.9% |
Span: 219bp (20.6%) |
Frame: 2 |
| gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays] >gi|47680375|gb|AAT37129.1| ar... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 71.6 |
e-value: 8e-38 |
Identity: 60.27% |
Span: 219bp (20.6%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|111226838|ref|XP_001134599.1| |
score: 68.9 |
e-value: 4e-10 |
Identity: 34.18% |
Span: 237bp (22.3%) |
Frame: 3 |
| RNA-binding |
| Match: gi|66820066|ref|XP_643679.1| |
score: 68.9 |
e-value: 4e-10 |
Identity: 34.18% |
Span: 237bp (22.3%) |
Frame: 3 |
| gi|66820066|ref|XP_643679.1| hypothetical protein DDB0217653 [Dictyostelium discoideum] >gi|60471815|gb|EAL69770.1| h... |
| Match: gi|47680311|gb|AAT37139.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 58.33% |
Span: 108bp (10.1%) |
Frame: 2 |
| gi|47680311|gb|AAT37139.1| arginine/serine-rich splicing factor 2 variant 3 [Zea mays] >gi|47680376|gb|AAT37130.1| ar... |
| Match: gi|47680307|gb|AAT37137.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 58.33% |
Span: 108bp (10.1%) |
Frame: 2 |
| gi|47680307|gb|AAT37137.1| arginine/serine-rich splicing factor 2 variant 1 [Zea mays] >gi|47680374|gb|AAT37128.1| ar... |
| Match: gi|47680297|gb|AAT37132.1| |
score: 53.1 |
e-value: 2e-05 |
Identity: 58.33% |
Span: 108bp (10.1%) |
Frame: 2 |
| gi|47680297|gb|AAT37132.1| arginine/serine-rich splicing factor 1 variant 1 [Zea mays] >gi|47680368|gb|AAT37123.1| ar... |
| Match: gi|47680299|gb|AAT37133.1| |
score: 53.1 |
e-value: 2e-05 |
Identity: 58.33% |
Span: 108bp (10.1%) |
Frame: 2 |
| gi|47680299|gb|AAT37133.1| arginine/serine-rich splicing factor 1 variant 2 [Zea mays] >gi|47680369|gb|AAT37124.1| ar... |
| Match: gi|56753389|gb|AAW24898.1| |
score: 52.4 |
e-value: 4e-05 |
Identity: 37.33% |
Span: 204bp (19.2%) |
Frame: 3 |
| SJCHGC05090 |
| Match: gi|47680371|gb|AAT37126.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 57.14% |
Span: 105bp (9.9%) |
Frame: 2 |
| gi|47680371|gb|AAT37126.1| arginine/serine-rich splicing factor 1 variant 4 [Zea mays] |
| Match: gi|47680303|gb|AAT37135.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 57.14% |
Span: 105bp (9.9%) |
Frame: 2 |
| gi|47680303|gb|AAT37135.1| arginine/serine-rich splicing factor 1 variant 4 [Zea mays] |
| Match: gi|47680301|gb|AAT37134.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 57.14% |
Span: 105bp (9.9%) |
Frame: 2 |
| gi|47680301|gb|AAT37134.1| arginine/serine-rich splicing factor 1 variant 3 [Zea mays] >gi|47680370|gb|AAT37125.1| ar... |
| Match: gi|39582979|emb|CAE73044.1| |
score: 50.4 |
e-value: 0.0001 |
Identity: 37.33% |
Span: 216bp (20.3%) |
Frame: 2 |
| gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae] |
| Match: gi|46249892|gb|AAH68361.1| |
score: 43.9 |
e-value: 7e-08 |
Identity: 33.8% |
Span: 213bp (20.0%) |
Frame: 3 |
| Zgc:85696 |
| Match: gi|47212234|emb|CAF96201.1| |
score: 43.5 |
e-value: 2e-07 |
Identity: 33.8% |
Span: 213bp (20.0%) |
Frame: 3 |
| gi|47212234|emb|CAF96201.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|68397653|ref|XP_688805.1| |
score: 41.2 |
e-value: 1e-06 |
Identity: 35.19% |
Span: 162bp (15.2%) |
Frame: 3 |
| gi|68397653|ref|XP_688805.1| PREDICTED: hypothetical protein LOC323721 isoform 1 [Danio rerio] |
| Match: gi|66814778|ref|XP_641568.1| |
score: 40 |
e-value: 7e-06 |
Identity: 30.77% |
Span: 213bp (20.0%) |
Frame: 3 |
| gi|66814778|ref|XP_641568.1| RNA recognition motif RNP-1-containing protein [Dictyostelium discoideum] >gi|60469605|g... |
| Match: gi|47209606|emb|CAF93001.1| |
score: 37.4 |
e-value: 2e-05 |
Identity: 35.14% |
Span: 222bp (20.8%) |
Frame: 2 |
| gi|47209606|emb|CAF93001.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|46249892|gb|AAH68361.1| |
score: 37.4 |
e-value: 7e-08 |
Identity: 38.46% |
Span: 234bp (22.0%) |
Frame: 2 |
| Zgc:85696 |
| Match: gi|47209605|emb|CAF93000.1| |
score: 36.6 |
e-value: 6e-05 |
Identity: 28.92% |
Span: 249bp (23.4%) |
Frame: 3 |
| gi|47209605|emb|CAF93000.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|47210650|emb|CAF94318.1| |
score: 36.2 |
e-value: 0.0001 |
Identity: 35.56% |
Span: 135bp (12.7%) |
Frame: 3 |
| gi|47210650|emb|CAF94318.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|47212234|emb|CAF96201.1| |
score: 35.8 |
e-value: 2e-07 |
Identity: 38.67% |
Span: 225bp (21.1%) |
Frame: 2 |
| gi|47212234|emb|CAF96201.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|68397653|ref|XP_688805.1| |
score: 35.8 |
e-value: 1e-06 |
Identity: 39.44% |
Span: 213bp (20.0%) |
Frame: 2 |
| gi|68397653|ref|XP_688805.1| PREDICTED: hypothetical protein LOC323721 isoform 1 [Danio rerio] |
| Match: gi|63100727|gb|AAH95368.1| |
score: 35.8 |
e-value: 0.0001 |
Identity: 39.44% |
Span: 213bp (20.0%) |
Frame: 2 |
| gi|63100727|gb|AAH95368.1| Zgc:110682 protein [Danio rerio] >gi|68397651|ref|XP_709887.1| PREDICTED: similar to RNA b... |
| Match: gi|47209606|emb|CAF93001.1| |
score: 35.8 |
e-value: 2e-05 |
Identity: 32.65% |
Span: 147bp (13.8%) |
Frame: 3 |
| gi|47209606|emb|CAF93001.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|47209605|emb|CAF93000.1| |
score: 34.7 |
e-value: 6e-05 |
Identity: 33.33% |
Span: 126bp (11.8%) |
Frame: 2 |
| gi|47209605|emb|CAF93000.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|66814778|ref|XP_641568.1| |
score: 34.3 |
e-value: 7e-06 |
Identity: 29.49% |
Span: 210bp (19.7%) |
Frame: 2 |
| gi|66814778|ref|XP_641568.1| RNA recognition motif RNP-1-containing protein [Dictyostelium discoideum] >gi|60469605|g... |
| Match: gi|63100727|gb|AAH95368.1| |
score: 34.3 |
e-value: 0.0001 |
Identity: 31.15% |
Span: 162bp (15.2%) |
Frame: 3 |
| gi|63100727|gb|AAH95368.1| Zgc:110682 protein [Danio rerio] >gi|68397651|ref|XP_709887.1| PREDICTED: similar to RNA b... |
| Match: gi|47210650|emb|CAF94318.1| |
score: 33.9 |
e-value: 0.0001 |
Identity: 37.84% |
Span: 222bp (20.8%) |
Frame: 2 |
| gi|47210650|emb|CAF94318.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|42573039|ref|NP_974616.1| |
score: 33.1 |
e-value: 2e-30 |
Identity: 92.86% |
Span: 42bp (3.9%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|42571257|ref|NP_973702.1| |
score: 27.3 |
e-value: 1e-24 |
Identity: 61.54% |
Span: 117bp (11.0%) |
Frame: 2 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
|
| 273 lower scoring hits censored -- only 64 best hits are stored. |
