| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|157327144|emb|CAO14416.1| |
score: 303 |
e-value: 2e-80 |
Identity: 81.01% |
Span: 537bp (50.3%) |
Frame: 1 |
| unnamed |
| Match: gi|217072928|gb|ACJ84824.1| |
score: 301 |
e-value: 8e-80 |
Identity: 68.97% |
Span: 684bp (64.1%) |
Frame: 1 |
| unknown [Medicago truncatula] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 290 |
e-value: 1e-76 |
Identity: 67.93% |
Span: 684bp (64.1%) |
Frame: 1 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|6899884|emb|CAB71893.1| |
score: 290 |
e-value: 1e-76 |
Identity: 67.93% |
Span: 684bp (64.1%) |
Frame: 1 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|1707366|emb|CAA67798.1| |
score: 289 |
e-value: 2e-76 |
Identity: 67.51% |
Span: 684bp (64.1%) |
Frame: 1 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|115456922|ref|NP_001052061.1| |
score: 274 |
e-value: 1e-71 |
Identity: 64.04% |
Span: 672bp (63.0%) |
Frame: 1 |
| Os04g0118900 [Oryza sativa (japonica cultivar-group)] >gi38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza sativa (japo... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 269 |
e-value: 3e-70 |
Identity: 63.4% |
Span: 684bp (64.1%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|125589157|gb|EAZ29507.1| |
score: 260 |
e-value: 2e-67 |
Identity: 57.25% |
Span: 672bp (63.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|47680295|gb|AAT37131.1| |
score: 259 |
e-value: 4e-67 |
Identity: 61.33% |
Span: 675bp (63.3%) |
Frame: 1 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 256 |
e-value: 2e-66 |
Identity: 60.09% |
Span: 669bp (62.7%) |
Frame: 1 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|41323931|gb|AAS00039.1| |
score: 248 |
e-value: 6e-64 |
Identity: 58.44% |
Span: 684bp (64.1%) |
Frame: 1 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|147863191|emb|CAN82624.1| |
score: 248 |
e-value: 6e-64 |
Identity: 58.44% |
Span: 684bp (64.1%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|116784190|gb|ABK23251.1| |
score: 244 |
e-value: 7e-63 |
Identity: 55.84% |
Span: 681bp (63.8%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 241 |
e-value: 1e-61 |
Identity: 56.41% |
Span: 675bp (63.3%) |
Frame: 1 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|195628072|gb|ACG35866.1| |
score: 239 |
e-value: 4e-61 |
Identity: 52.92% |
Span: 681bp (63.8%) |
Frame: 1 |
| arginine/serine-rich splicing factor RSP41 [Zea mays] |
| Match: gi|212722812|ref|NP_001131484.1| |
score: 239 |
e-value: 4e-61 |
Identity: 52.92% |
Span: 681bp (63.8%) |
Frame: 1 |
| hypothetical protein LOC100192821 [Zea mays] >gi194691660|gb|ACF79914.1| unknown [Zea mays] >gi|224032781|gb|ACN35466... |
| Match: gi|1667582|gb|AAB18813.1| |
score: 239 |
e-value: 3e-61 |
Identity: 56.41% |
Span: 675bp (63.3%) |
Frame: 1 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|116780574|gb|ABK21727.1| |
score: 239 |
e-value: 4e-61 |
Identity: 56.72% |
Span: 681bp (63.8%) |
Frame: 1 |
| unknown |
| Match: gi|7269400|emb|CAB81360.1| |
score: 239 |
e-value: 3e-61 |
Identity: 56.22% |
Span: 672bp (63.0%) |
Frame: 1 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|113205286|gb|ABI34327.1| |
score: 238 |
e-value: 7e-61 |
Identity: 54.94% |
Span: 684bp (64.1%) |
Frame: 1 |
| Arginine/serine-rich splicing factor RSP41, putative [Solanum demissum] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 237 |
e-value: 1e-60 |
Identity: 57.02% |
Span: 684bp (64.1%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|168038912|ref|XP_001771943.1| |
score: 237 |
e-value: 1e-60 |
Identity: 53.16% |
Span: 681bp (63.8%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162676725|gb|EDQ63204.1| predicted protein [Physcomitrella... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 237 |
e-value: 1e-60 |
Identity: 57.02% |
Span: 684bp (64.1%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|148909122|gb|ABR17662.1| |
score: 236 |
e-value: 2e-60 |
Identity: 54.17% |
Span: 681bp (63.8%) |
Frame: 1 |
| unknown |
| Match: gi|1707370|emb|CAA67799.1| |
score: 236 |
e-value: 3e-60 |
Identity: 56.6% |
Span: 684bp (64.1%) |
Frame: 1 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|157349243|emb|CAO24389.1| |
score: 235 |
e-value: 4e-60 |
Identity: 55.6% |
Span: 675bp (63.3%) |
Frame: 1 |
| unnamed |
| Match: gi|162457883|ref|NP_001105264.1| |
score: 234 |
e-value: 7e-60 |
Identity: 62.09% |
Span: 546bp (51.2%) |
Frame: 1 |
| arginine/serine-rich |
| Match: gi|217071698|gb|ACJ84209.1| |
score: 233 |
e-value: 2e-59 |
Identity: 53.25% |
Span: 684bp (64.1%) |
Frame: 1 |
| unknown [Medicago truncatula] |
| Match: gi|116786163|gb|ABK24003.1| |
score: 233 |
e-value: 2e-59 |
Identity: 53.69% |
Span: 681bp (63.8%) |
Frame: 1 |
| unknown |
| Match: gi|125580623|gb|EAZ21554.1| |
score: 232 |
e-value: 4e-59 |
Identity: 54.2% |
Span: 684bp (64.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|218189952|gb|EEC72379.1| |
score: 232 |
e-value: 4e-59 |
Identity: 54.2% |
Span: 684bp (64.1%) |
Frame: 1 |
| hypothetical protein OsI_05650 [Oryza sativa Indica Group] |
| Match: gi|115443899|ref|NP_001045729.1| |
score: 232 |
e-value: 4e-59 |
Identity: 54.2% |
Span: 684bp (64.1%) |
Frame: 1 |
| Os02g0122800 [Oryza sativa (japonica cultivar-group)] >gi41053015|dbj|BAD07946.1| putative arginine/serine-rich splic... |
| Match: gi|194696906|gb|ACF82537.1| |
score: 223 |
e-value: 3e-56 |
Identity: 54.08% |
Span: 684bp (64.1%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|195613160|gb|ACG28410.1| |
score: 223 |
e-value: 3e-56 |
Identity: 54.08% |
Span: 684bp (64.1%) |
Frame: 1 |
| arginine/serine-rich |
| Match: gi|212722462|ref|NP_001132395.1| |
score: 220 |
e-value: 2e-55 |
Identity: 51.93% |
Span: 684bp (64.1%) |
Frame: 1 |
| hypothetical protein LOC100193841 [Zea mays] >gi194694266|gb|ACF81217.1| unknown [Zea mays] |
| Match: gi|42571257|ref|NP_973702.1| |
score: 216 |
e-value: 3e-54 |
Identity: 62.19% |
Span: 582bp (54.5%) |
Frame: 1 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
| Match: gi|217071906|gb|ACJ84313.1| |
score: 216 |
e-value: 2e-54 |
Identity: 53.25% |
Span: 684bp (64.1%) |
Frame: 1 |
| unknown [Medicago truncatula] |
| Match: gi|145334133|ref|NP_001078447.1| |
score: 188 |
e-value: 6e-46 |
Identity: 55.28% |
Span: 570bp (53.4%) |
Frame: 1 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi222423494|dbj|BAH19717.1| ... |
| Match: gi|42573039|ref|NP_974616.1| |
score: 177 |
e-value: 2e-42 |
Identity: 54.69% |
Span: 549bp (51.5%) |
Frame: 1 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|6759507|emb|CAB69816.1| |
score: 176 |
e-value: 3e-42 |
Identity: 75.44% |
Span: 339bp (31.8%) |
Frame: 1 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|195615816|gb|ACG29738.1| |
score: 170 |
e-value: 2e-40 |
Identity: 50% |
Span: 579bp (54.3%) |
Frame: 1 |
| arginine/serine-rich splicing factor RSP41 [Zea mays] >gi223947499|gb|ACN27833.1| unknown [Zea mays] |
| Match: gi|159475431|ref|XP_001695822.1| |
score: 140 |
e-value: 2e-31 |
Identity: 41.32% |
Span: 498bp (46.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|194698618|gb|ACF83393.1| |
score: 119 |
e-value: 6e-25 |
Identity: 59.17% |
Span: 360bp (33.7%) |
Frame: 1 |
| unknown |
| Match: gi|159477703|ref|XP_001696948.1| |
score: 118 |
e-value: 8e-25 |
Identity: 37.04% |
Span: 486bp (45.5%) |
Frame: 1 |
| hypothetical |
| Match: gi|194693536|gb|ACF80852.1| |
score: 117 |
e-value: 1e-24 |
Identity: 56.15% |
Span: 372bp (34.9%) |
Frame: 1 |
| unknown |
| Match: gi|219123281|ref|XP_002181956.1| |
score: 93.2 |
e-value: 3e-17 |
Identity: 31.05% |
Span: 513bp (48.1%) |
Frame: 1 |
| predicted |
| Match: gi|209586384|gb|ACI65069.1| |
score: 92.4 |
e-value: 6e-17 |
Identity: 34.27% |
Span: 519bp (48.6%) |
Frame: 1 |
| predicted |
| Match: gi|33146854|dbj|BAC79849.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 32.29% |
Span: 531bp (49.8%) |
Frame: 1 |
| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group] |
| Match: gi|215741122|dbj|BAG97617.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 32.29% |
Span: 531bp (49.8%) |
Frame: 1 |
| unnamed protein product [Oryza sativa Japonica Group] |
| Match: gi|55792397|gb|AAV65309.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 32.95% |
Span: 465bp (43.6%) |
Frame: 1 |
| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|218200241|gb|EEC82668.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 32.62% |
Span: 531bp (49.8%) |
Frame: 1 |
| hypothetical protein OsI_27298 [Oryza sativa Indica Group] |
| Match: gi|115474019|ref|NP_001060608.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 32.29% |
Span: 531bp (49.8%) |
Frame: 1 |
| Os07g0673500 [Oryza sativa (japonica cultivar-group)] >gi113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonic... |
| Match: gi|187023466|emb|CAP37427.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 34.34% |
Span: 429bp (40.2%) |
Frame: 1 |
| Hypothetical |
| Match: gi|11527011|gb|AAG36874.1|AF242767_1 |
score: 84 |
e-value: 2e-14 |
Identity: 33.14% |
Span: 435bp (40.8%) |
Frame: 1 |
| SF2 |
| Match: gi|25150290|ref|NP_499649.2| |
score: 84 |
e-value: 2e-14 |
Identity: 33.14% |
Span: 435bp (40.8%) |
Frame: 1 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|111226838|ref|XP_001134599.1| |
score: 83.2 |
e-value: 4e-14 |
Identity: 29.94% |
Span: 519bp (48.6%) |
Frame: 1 |
| RNA-binding |
| Match: gi|68037673|gb|AAY84884.1| |
score: 82.8 |
e-value: 5e-14 |
Identity: 32.37% |
Span: 465bp (43.6%) |
Frame: 1 |
| alternative splicing regulator [Triticum aestivum] |
| Match: gi|187036455|emb|CAP24436.1| |
score: 81.6 |
e-value: 1e-13 |
Identity: 32.03% |
Span: 435bp (40.8%) |
Frame: 1 |
| C. |
| Match: gi|168043399|ref|XP_001774172.1| |
score: 80.9 |
e-value: 2e-13 |
Identity: 33.96% |
Span: 432bp (40.5%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162674440|gb|EDQ60948.1| predicted protein [Physcomitrella... |
| Match: gi|159463554|ref|XP_001690007.1| |
score: 80.9 |
e-value: 2e-13 |
Identity: 50% |
Span: 255bp (23.9%) |
Frame: 1 |
| SR |
| Match: gi|148909953|gb|ABR18062.1| |
score: 79.7 |
e-value: 4e-13 |
Identity: 29.8% |
Span: 540bp (50.6%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|30679143|ref|NP_567235.3| |
score: 79.3 |
e-value: 5e-13 |
Identity: 31.71% |
Span: 534bp (50.0%) |
Frame: 1 |
| gi|30679143|ref|NP_567235.3| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] |
| Match: gi|156538036|ref|XP_001603791.1| |
score: 78.2 |
e-value: 1e-12 |
Identity: 30.85% |
Span: 519bp (48.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|157355203|emb|CAO48579.1| |
score: 78.2 |
e-value: 1e-12 |
Identity: 33.95% |
Span: 432bp (40.5%) |
Frame: 1 |
| unnamed |
| Match: gi|219446433|ref|XP_002220973.1| |
score: 77.8 |
e-value: 1e-12 |
Identity: 30.39% |
Span: 528bp (49.5%) |
Frame: 1 |
| hypothetical |
| Match: gi|215494365|gb|EEC04006.1| |
score: 77.4 |
e-value: 2e-12 |
Identity: 33.33% |
Span: 441bp (41.3%) |
Frame: 1 |
| alternative |
| Match: gi|57164147|ref|NP_001009255.1| |
score: 76.6 |
e-value: 3e-12 |
Identity: 30.32% |
Span: 537bp (50.3%) |
Frame: 1 |
| gi|57164147|ref|NP_001009255.1| splicing factor, arginine/serine rich 9 (predicted) [Rattus norvegicus] >gi|56388745|... |
| Match: gi|52140006|gb|AAU29329.1| |
score: 76.6 |
e-value: 3e-12 |
Identity: 31.07% |
Span: 540bp (50.6%) |
Frame: 1 |
| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] |
| Match: gi|219363191|ref|NP_001137034.1| |
score: 76.6 |
e-value: 3e-12 |
Identity: 31.07% |
Span: 540bp (50.6%) |
Frame: 1 |
| hypothetical protein LOC100217203 [Zea mays] >gi52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [... |
| Match: gi|72032169|ref|XP_798746.1| |
score: 76.6 |
e-value: 3e-12 |
Identity: 29.21% |
Span: 429bp (40.2%) |
Frame: 1 |
| gi|72032169|ref|XP_798746.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 [Strongylocentrotus purpur... |
| Match: gi|219487511|ref|XP_002240707.1| |
score: 76.3 |
e-value: 4e-12 |
Identity: 31.13% |
Span: 429bp (40.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|157350066|emb|CAO40004.1| |
score: 76.3 |
e-value: 4e-12 |
Identity: 36.84% |
Span: 360bp (33.7%) |
Frame: 1 |
| unnamed |
| Match: gi|147853033|emb|CAN81258.1| |
score: 76.3 |
e-value: 4e-12 |
Identity: 36.84% |
Span: 360bp (33.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|168009612|ref|XP_001757499.1| |
score: 76.3 |
e-value: 4e-12 |
Identity: 31.61% |
Span: 432bp (40.5%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162691193|gb|EDQ77556.1| predicted protein [Physcomitrella... |
| Match: gi|30679138|ref|NP_849537.1| |
score: 75.9 |
e-value: 6e-12 |
Identity: 34% |
Span: 384bp (36.0%) |
Frame: 1 |
| gi|30679138|ref|NP_849537.1| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] gi|26451... |
| Match: gi|3193304|gb|AAC19288.1| |
score: 75.9 |
e-value: 6e-12 |
Identity: 34% |
Span: 384bp (36.0%) |
Frame: 1 |
| T14P8.21 |
| Match: gi|215502148|gb|EEC11642.1| |
score: 75.9 |
e-value: 6e-12 |
Identity: 31.65% |
Span: 429bp (40.2%) |
Frame: 1 |
| alternative |
| Match: gi|218188085|gb|EEC70512.1| |
score: 75.9 |
e-value: 6e-12 |
Identity: 32.57% |
Span: 465bp (43.6%) |
Frame: 1 |
| hypothetical protein OsI_01613 [Oryza sativa Indica Group] |
| Match: gi|57105666|ref|XP_534706.1| |
score: 75.9 |
e-value: 6e-12 |
Identity: 32.48% |
Span: 435bp (40.8%) |
Frame: 1 |
| gi|57105666|ref|XP_534706.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 9 (Pre-mRNA splicing factor ... |
| Match: gi|73966546|ref|XP_866770.1| |
score: 75.5 |
e-value: 7e-12 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|109114623|ref|XP_001103473.1| |
score: 75.5 |
e-value: 7e-12 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|156379214|ref|XP_001631353.1| |
score: 75.5 |
e-value: 7e-12 |
Identity: 30.81% |
Span: 504bp (47.2%) |
Frame: 1 |
| predicted |
| Match: gi|148908052|gb|ABR17145.1| |
score: 75.5 |
e-value: 7e-12 |
Identity: 31.28% |
Span: 465bp (43.6%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|114669600|ref|XP_523806.2| |
score: 75.5 |
e-value: 7e-12 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|197099026|ref|NP_001126337.1| |
score: 75.5 |
e-value: 7e-12 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| splicing |
| Match: gi|60811245|gb|AAX36166.1| |
score: 75.5 |
e-value: 7e-12 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct] |
| Match: gi|5902076|ref|NP_008855.1| |
score: 75.5 |
e-value: 7e-12 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| gi|5902076|ref|NP_008855.1| splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) [H... |
| Match: gi|4506903|ref|NP_003760.1| |
score: 75.1 |
e-value: 1e-11 |
Identity: 32.48% |
Span: 435bp (40.8%) |
Frame: 1 |
| gi|4506903|ref|NP_003760.1| splicing factor, arginine/serine-rich 9 [Homo sapiens] gi|3929377|sp|Q13242|SFR9_HUMAN Sp... |
| Match: gi|168000741|ref|XP_001753074.1| |
score: 75.1 |
e-value: 1e-11 |
Identity: 30.68% |
Span: 432bp (40.5%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162695773|gb|EDQ82115.1| predicted protein [Physcomitrella... |
| Match: gi|194043069|ref|XP_001928307.1| |
score: 75.1 |
e-value: 1e-11 |
Identity: 32.48% |
Span: 435bp (40.8%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|169404002|ref|NP_955868.1| |
score: 74.7 |
e-value: 1e-11 |
Identity: 30.12% |
Span: 438bp (41.0%) |
Frame: 1 |
| splicing |
| Match: gi|125586218|gb|EAZ26882.1| |
score: 74.3 |
e-value: 2e-11 |
Identity: 29.41% |
Span: 501bp (47.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|189233695|ref|XP_001812208.1| |
score: 74.3 |
e-value: 2e-11 |
Identity: 31.02% |
Span: 510bp (47.8%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|116175261|ref|NP_001070685.1| |
score: 74.3 |
e-value: 2e-11 |
Identity: 30.54% |
Span: 438bp (41.0%) |
Frame: 1 |
| splicing |
| Match: gi|195639150|gb|ACG39043.1| |
score: 73.9 |
e-value: 2e-11 |
Identity: 31.61% |
Span: 465bp (43.6%) |
Frame: 1 |
| pre-mRNA-splicing |
| Match: gi|119628063|gb|EAX07658.1| |
score: 73.9 |
e-value: 2e-11 |
Identity: 30.62% |
Span: 438bp (41.0%) |
Frame: 1 |
| splicing |
| Match: gi|194696448|gb|ACF82308.1| |
score: 73.9 |
e-value: 2e-11 |
Identity: 31.61% |
Span: 465bp (43.6%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|126328783|ref|XP_001365267.1| |
score: 73.9 |
e-value: 2e-11 |
Identity: 30.62% |
Span: 438bp (41.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|119628064|gb|EAX07659.1| |
score: 73.9 |
e-value: 2e-11 |
Identity: 30.62% |
Span: 438bp (41.0%) |
Frame: 1 |
| splicing |
| Match: gi|166091440|ref|NP_001107213.1| |
score: 73.9 |
e-value: 2e-11 |
Identity: 29.84% |
Span: 525bp (49.2%) |
Frame: 1 |
| splicing |
|
| 69 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 15 hits recorded |
| Match: At3G61860.1 |
score: 290 |
e-value: 8e-79 |
Identity: 67.93% |
Span: 684bp (64.1%) |
Frame: 1 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At2G46610.1 |
score: 269 |
e-value: 2e-72 |
Identity: 63.4% |
Span: 684bp (64.1%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At4G25500.1 |
score: 241 |
e-value: 7e-64 |
Identity: 56.41% |
Span: 675bp (63.3%) |
Frame: 1 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At5G52040.2 |
score: 237 |
e-value: 1e-62 |
Identity: 57.02% |
Span: 684bp (64.1%) |
Frame: 1 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At5G52040.1 |
score: 237 |
e-value: 1e-62 |
Identity: 57.02% |
Span: 684bp (64.1%) |
Frame: 1 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At2G46610.2 |
score: 216 |
e-value: 2e-56 |
Identity: 62.19% |
Span: 582bp (54.5%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At4G25500.3 |
score: 188 |
e-value: 4e-48 |
Identity: 55.28% |
Span: 570bp (53.4%) |
Frame: 1 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35) | chr4:... |
| Match: At4G25500.2 |
score: 177 |
e-value: 1e-44 |
Identity: 54.69% |
Span: 549bp (51.5%) |
Frame: 1 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At4G02430.2 |
score: 79.3 |
e-value: 4e-15 |
Identity: 31.71% |
Span: 534bp (50.0%) |
Frame: 1 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1071313 FORWARD |
| Match: At4G02430.1 |
score: 75.9 |
e-value: 4e-14 |
Identity: 34% |
Span: 384bp (36.0%) |
Frame: 1 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1070543 FORWARD |
| Match: At1G02840.1 |
score: 73.2 |
e-value: 3e-13 |
Identity: 29.05% |
Span: 531bp (49.8%) |
Frame: 1 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.3 |
score: 73.2 |
e-value: 3e-13 |
Identity: 29.05% |
Span: 531bp (49.8%) |
Frame: 1 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.2 |
score: 73.2 |
e-value: 3e-13 |
Identity: 29.05% |
Span: 531bp (49.8%) |
Frame: 1 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
| Match: At3G49430.1 |
score: 66.6 |
e-value: 2e-11 |
Identity: 29.65% |
Span: 432bp (40.5%) |
Frame: 1 |
| Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A); RNA binding | chr3:18343653-18345814 FORWARD |
| Match: At3G49430.2 |
score: 66.6 |
e-value: 2e-11 |
Identity: 29.65% |
Span: 432bp (40.5%) |
Frame: 1 |
| Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A) | chr3:18343653-18345602 FORWARD |
|
| swissprot [blastx] | Showing best 19 hits recorded |
| Match: P92964 |
score: 290 |
e-value: 7e-78 |
Identity: 67.93% |
Span: 684bp (64.1%) |
Frame: 1 |
| Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis thaliana GN=RSP31 PE=1 SV=2 |
| Match: P92965 |
score: 241 |
e-value: 7e-63 |
Identity: 56.41% |
Span: 675bp (63.3%) |
Frame: 1 |
| Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana GN=RSP40 PE=1 SV=2 |
| Match: P92966 |
score: 237 |
e-value: 1e-61 |
Identity: 57.02% |
Span: 684bp (64.1%) |
Frame: 1 |
| Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis thaliana GN=RSP41 PE=1 SV=2 |
| Match: Q9NEW6 |
score: 84 |
e-value: 1e-15 |
Identity: 33.14% |
Span: 435bp (40.8%) |
Frame: 1 |
| Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2 |
| Match: Q5PPI1 |
score: 76.6 |
e-value: 2e-13 |
Identity: 30.32% |
Span: 537bp (50.3%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 9 OS=Rattus norvegicus GN=Sfrs9 PE=1 SV=1 |
| Match: Q6PDM2 |
score: 75.5 |
e-value: 5e-13 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 1 OS=Mus musculus GN=Sfrs1 PE=1 SV=3 |
| Match: Q0VCY7 |
score: 75.5 |
e-value: 5e-13 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 1 OS=Bos taurus GN=SFRS1 PE=2 SV=1 |
| Match: Q5R7H2 |
score: 75.5 |
e-value: 5e-13 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 1 OS=Pongo abelii GN=SFRS1 PE=2 SV=3 |
| Match: Q07955 |
score: 75.5 |
e-value: 5e-13 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 1 OS=Homo sapiens GN=SFRS1 PE=1 SV=2 |
| Match: Q3YLA6 |
score: 75.5 |
e-value: 5e-13 |
Identity: 30.37% |
Span: 525bp (49.2%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 1 OS=Sus scrofa GN=SFRS1 PE=2 SV=3 |
| Match: Q13242 |
score: 75.1 |
e-value: 6e-13 |
Identity: 32.48% |
Span: 435bp (40.8%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 9 OS=Homo sapiens GN=SFRS9 PE=1 SV=1 |
| Match: Q8VE97 |
score: 73.9 |
e-value: 1e-12 |
Identity: 30.62% |
Span: 438bp (41.0%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 4 OS=Mus musculus GN=Sfrs4 PE=2 SV=1 |
| Match: Q08170 |
score: 73.9 |
e-value: 1e-12 |
Identity: 30.62% |
Span: 438bp (41.0%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 4 OS=Homo sapiens GN=SFRS4 PE=1 SV=2 |
| Match: Q5ZML3 |
score: 73.9 |
e-value: 1e-12 |
Identity: 29.84% |
Span: 525bp (49.2%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 1 OS=Gallus gallus GN=SFRS1 PE=1 SV=3 |
| Match: Q3B7L6 |
score: 73.6 |
e-value: 2e-12 |
Identity: 30.54% |
Span: 438bp (41.0%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 6 OS=Bos taurus GN=SFRS6 PE=2 SV=1 |
| Match: Q13247 |
score: 73.6 |
e-value: 2e-12 |
Identity: 30.54% |
Span: 438bp (41.0%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 6 OS=Homo sapiens GN=SFRS6 PE=1 SV=2 |
| Match: O22315 |
score: 73.2 |
e-value: 2e-12 |
Identity: 29.05% |
Span: 531bp (49.8%) |
Frame: 1 |
| Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1 |
| Match: Q9D0B0 |
score: 72.8 |
e-value: 3e-12 |
Identity: 31.85% |
Span: 435bp (40.8%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 9 OS=Mus musculus GN=Sfrs9 PE=1 SV=1 |
| Match: Q6NYA0 |
score: 70.1 |
e-value: 2e-11 |
Identity: 29.32% |
Span: 525bp (49.2%) |
Frame: 1 |
| Splicing factor, arginine/serine-rich 1 OS=Danio rerio GN=sfrs1 |
|
