| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|133872|sp|P29344.1|RR1_SPIOL |
score: 254 |
e-value: 4e-128 |
Identity: 92.75% |
Span: 414bp (38.5%) |
Frame: 1 |
| RecName: Full=30S ribosomal protein S1, chloroplastic; AltName: Full=CS1; Flags: Precursor >gi18060|emb|CAA46927.1| r... |
| Match: gi|225432062|ref|XP_002280604.1| |
score: 248 |
e-value: 3e-128 |
Identity: 89.86% |
Span: 414bp (38.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270234235|emb|CBI22839.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224099083|ref|XP_002311368.1| |
score: 246 |
e-value: 1e-124 |
Identity: 89.13% |
Span: 414bp (38.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi118485696|gb|ABK94698.1| unknown [Populus trichocarpa] >gi|222851188|gb|EE... |
| Match: gi|255556496|ref|XP_002519282.1| |
score: 245 |
e-value: 6e-63 |
Identity: 81.46% |
Span: 453bp (42.2%) |
Frame: 1 |
| tex protein-relatedtranscription accessory protein, putative [Ricinus communis] >gi223541597|gb|EEF43146.1| tex prote... |
| Match: gi|255635364|gb|ACU18035.1| |
score: 244 |
e-value: 3e-119 |
Identity: 87.68% |
Span: 414bp (38.5%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|30692346|ref|NP_850903.1| |
score: 241 |
e-value: 1e-61 |
Identity: 83.45% |
Span: 435bp (40.5%) |
Frame: 1 |
| RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome [Arabidopsis thaliana] >gi13877939|gb|A... |
| Match: gi|224112036|ref|XP_002316061.1| |
score: 240 |
e-value: 5e-123 |
Identity: 87.68% |
Span: 414bp (38.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222865101|gb|EEF02232.1| predicted protein [Populus trichocarpa] |
| Match: gi|225432062|ref|XP_002280604.1| |
score: 235 |
e-value: 3e-128 |
Identity: 85.43% |
Span: 453bp (42.2%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270234235|emb|CBI22839.1| unnamed protein product [Vitis vinifera] |
| Match: gi|133872|sp|P29344.1|RR1_SPIOL |
score: 229 |
e-value: 4e-128 |
Identity: 83.44% |
Span: 453bp (42.2%) |
Frame: 3 |
| RecName: Full=30S ribosomal protein S1, chloroplastic; AltName: Full=CS1; Flags: Precursor >gi18060|emb|CAA46927.1| r... |
| Match: gi|255556496|ref|XP_002519282.1| |
score: 229 |
e-value: 5e-58 |
Identity: 84.21% |
Span: 453bp (42.2%) |
Frame: 3 |
| tex protein-relatedtranscription accessory protein, putative [Ricinus communis] >gi223541597|gb|EEF43146.1| tex prote... |
| Match: gi|108707824|gb|ABF95619.1| |
score: 228 |
e-value: 9e-58 |
Identity: 80.71% |
Span: 420bp (39.1%) |
Frame: 1 |
| 30S ribosomal protein S1, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi1255... |
| Match: gi|222624814|gb|EEE58946.1| |
score: 228 |
e-value: 9e-58 |
Identity: 80.71% |
Span: 420bp (39.1%) |
Frame: 1 |
| hypothetical protein OsJ_10622 [Oryza sativa Japonica Group] |
| Match: gi|149391139|gb|ABR25587.1| |
score: 228 |
e-value: 9e-58 |
Identity: 80.71% |
Span: 420bp (39.1%) |
Frame: 1 |
| 30S ribosomal protein S1 [Oryza sativa Indica Group] |
| Match: gi|115452675|ref|NP_001049938.1| |
score: 228 |
e-value: 9e-58 |
Identity: 80.71% |
Span: 420bp (39.1%) |
Frame: 1 |
| Os03g0315800 [Oryza sativa (japonica cultivar-group)] >gi113548409|dbj|BAF11852.1| Os03g0315800 [Oryza sativa Japonic... |
| Match: gi|224112036|ref|XP_002316061.1| |
score: 226 |
e-value: 5e-123 |
Identity: 80.79% |
Span: 453bp (42.2%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222865101|gb|EEF02232.1| predicted protein [Populus trichocarpa] |
| Match: gi|224099083|ref|XP_002311368.1| |
score: 226 |
e-value: 1e-124 |
Identity: 81.46% |
Span: 453bp (42.2%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi118485696|gb|ABK94698.1| unknown [Populus trichocarpa] >gi|222851188|gb|EE... |
| Match: gi|30692346|ref|NP_850903.1| |
score: 218 |
e-value: 7e-55 |
Identity: 78.15% |
Span: 453bp (42.2%) |
Frame: 3 |
| RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome [Arabidopsis thaliana] >gi13877939|gb|A... |
| Match: gi|255635364|gb|ACU18035.1| |
score: 209 |
e-value: 3e-119 |
Identity: 74.17% |
Span: 453bp (42.2%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|115452675|ref|NP_001049938.1| |
score: 204 |
e-value: 1e-50 |
Identity: 74.17% |
Span: 453bp (42.2%) |
Frame: 3 |
| Os03g0315800 [Oryza sativa (japonica cultivar-group)] >gi113548409|dbj|BAF11852.1| Os03g0315800 [Oryza sativa Japonic... |
| Match: gi|222624814|gb|EEE58946.1| |
score: 204 |
e-value: 1e-50 |
Identity: 74.17% |
Span: 453bp (42.2%) |
Frame: 3 |
| hypothetical protein OsJ_10622 [Oryza sativa Japonica Group] |
| Match: gi|168011566|ref|XP_001758474.1| |
score: 163 |
e-value: 3e-80 |
Identity: 74.04% |
Span: 312bp (29.1%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162690509|gb|EDQ76876.1| predicted protein [Physcomitrella... |
| Match: gi|168014820|ref|XP_001759949.1| |
score: 162 |
e-value: 4e-80 |
Identity: 58.44% |
Span: 453bp (42.2%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162688699|gb|EDQ75074.1| predicted protein [Physcomitrella... |
| Match: gi|168014820|ref|XP_001759949.1| |
score: 161 |
e-value: 4e-80 |
Identity: 73.53% |
Span: 306bp (28.5%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162688699|gb|EDQ75074.1| predicted protein [Physcomitrella... |
| Match: gi|168011566|ref|XP_001758474.1| |
score: 160 |
e-value: 3e-80 |
Identity: 58.71% |
Span: 453bp (42.2%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162690509|gb|EDQ76876.1| predicted protein [Physcomitrella... |
| Match: gi|149391139|gb|ABR25587.1| |
score: 115 |
e-value: 7e-24 |
Identity: 84.15% |
Span: 246bp (22.9%) |
Frame: 3 |
| 30S ribosomal protein S1 [Oryza sativa Indica Group] |
|
| 472 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At5G30510.1 |
score: 241 |
e-value: 6e-64 |
Identity: 83.45% |
Span: 435bp (40.5%) |
Frame: 1 |
| Symbols: ARRPS1, RPS1 | RPS1 (ribosomal protein S1); RNA binding | chr5:11636492-11638453 REVERSE |
| Match: At5G30510.1 |
score: 218 |
e-value: 4e-57 |
Identity: 78.15% |
Span: 453bp (42.2%) |
Frame: 3 |
| Symbols: ARRPS1, RPS1 | RPS1 (ribosomal protein S1); RNA binding | chr5:11636492-11638453 REVERSE |
| Match: At1G71720.1 |
score: 57.8 |
e-value: 2e-16 |
Identity: 35.96% |
Span: 261bp (24.3%) |
Frame: 1 |
| S1 RNA-binding domain-containing protein | chr1:26987406-26989555 FORWARD |
| Match: At3G23700.1 |
score: 56.2 |
e-value: 1e-12 |
Identity: 41.18% |
Span: 186bp (17.3%) |
Frame: 1 |
| S1 RNA-binding domain-containing protein | chr3:8531696-8533749 REVERSE |
| Match: At1G71720.1 |
score: 45.4 |
e-value: 2e-16 |
Identity: 26.79% |
Span: 336bp (31.3%) |
Frame: 3 |
| S1 RNA-binding domain-containing protein | chr1:26987406-26989555 FORWARD |
| Match: At3G23700.1 |
score: 33.9 |
e-value: 1e-12 |
Identity: 27.03% |
Span: 297bp (27.7%) |
Frame: 3 |
| S1 RNA-binding domain-containing protein | chr3:8531696-8533749 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P29344 |
score: 254 |
e-value: 3e-129 |
Identity: 92.75% |
Span: 414bp (38.5%) |
Frame: 1 |
| 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1 |
| Match: P29344 |
score: 229 |
e-value: 3e-129 |
Identity: 83.44% |
Span: 453bp (42.2%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1 |
| Match: P46228 |
score: 124 |
e-value: 1e-27 |
Identity: 55.77% |
Span: 312bp (29.1%) |
Frame: 1 |
| 30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4 |
| Match: P46228 |
score: 116 |
e-value: 2e-25 |
Identity: 44.08% |
Span: 453bp (42.2%) |
Frame: 3 |
| 30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4 |
| Match: P73530 |
score: 114 |
e-value: 1e-24 |
Identity: 44.08% |
Span: 453bp (42.2%) |
Frame: 3 |
| 30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803) GN=rps1A PE=3 SV=1 |
| Match: P73530 |
score: 110 |
e-value: 2e-23 |
Identity: 45.67% |
Span: 381bp (35.5%) |
Frame: 1 |
| 30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803) GN=rps1A PE=3 SV=1 |
| Match: P51345 |
score: 79 |
e-value: 3e-24 |
Identity: 35.66% |
Span: 378bp (35.2%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplastic OS=Porphyra purpurea GN=rps1 PE=3 SV=1 |
| Match: P50889 |
score: 75.9 |
e-value: 4e-23 |
Identity: 56.25% |
Span: 192bp (17.9%) |
Frame: 1 |
| 40S ribosomal protein S1 OS=Leuconostoc lactis GN=rps1 PE=2 SV=2 |
| Match: Q1XDE2 |
score: 75.1 |
e-value: 2e-23 |
Identity: 33.07% |
Span: 378bp (35.2%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplastic OS=Porphyra yezoensis GN=rps1 PE=3 SV=2 |
| Match: P74142 |
score: 75.1 |
e-value: 7e-26 |
Identity: 30.92% |
Span: 453bp (42.2%) |
Frame: 3 |
| 30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803) GN=rps1b PE=3 SV=1 |
| Match: O06000 |
score: 71.2 |
e-value: 4e-18 |
Identity: 48.48% |
Span: 198bp (18.4%) |
Frame: 1 |
| 30S ribosomal protein S1 homolog OS=Bacillus cereus (strain ATCC 10987) GN=BCE_1625 PE=3 SV=1 |
| Match: P38494 |
score: 69.3 |
e-value: 7e-23 |
Identity: 46.97% |
Span: 198bp (18.4%) |
Frame: 1 |
| 30S ribosomal protein S1 homolog OS=Bacillus subtilis GN=ypfD PE=1 SV=1 |
| Match: Q97I09 |
score: 66.2 |
e-value: 4e-16 |
Identity: 54.84% |
Span: 186bp (17.3%) |
Frame: 1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium acetobutylicum GN=ispH PE=3 SV=1 |
| Match: P74142 |
score: 63.2 |
e-value: 7e-26 |
Identity: 41.77% |
Span: 237bp (22.1%) |
Frame: 1 |
| 30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803) GN=rps1b PE=3 SV=1 |
| Match: Q4L6I1 |
score: 61.2 |
e-value: 4e-16 |
Identity: 41.18% |
Span: 204bp (19.0%) |
Frame: 1 |
| 30S ribosomal protein S1 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsA PE=3 SV=1 |
| Match: O06147 |
score: 59.7 |
e-value: 3e-19 |
Identity: 44.44% |
Span: 189bp (17.6%) |
Frame: 1 |
| 30S ribosomal protein S1 OS=Mycobacterium tuberculosis GN=rpsA PE=3 SV=1 |
| Match: P38494 |
score: 58.9 |
e-value: 7e-23 |
Identity: 32.7% |
Span: 447bp (41.6%) |
Frame: 3 |
| 30S ribosomal protein S1 homolog OS=Bacillus subtilis GN=ypfD PE=1 SV=1 |
| Match: P46836 |
score: 57.8 |
e-value: 1e-18 |
Identity: 42.86% |
Span: 189bp (17.6%) |
Frame: 1 |
| 30S ribosomal protein S1 OS=Mycobacterium leprae GN=rpsA PE=3 SV=2 |
| Match: O06147 |
score: 56.2 |
e-value: 3e-19 |
Identity: 31.69% |
Span: 414bp (38.5%) |
Frame: 3 |
| 30S ribosomal protein S1 OS=Mycobacterium tuberculosis GN=rpsA PE=3 SV=1 |
| Match: P46836 |
score: 56.2 |
e-value: 1e-18 |
Identity: 30.26% |
Span: 420bp (39.1%) |
Frame: 3 |
| 30S ribosomal protein S1 OS=Mycobacterium leprae GN=rpsA PE=3 SV=2 |
| Match: Q1XDE2 |
score: 55.1 |
e-value: 2e-23 |
Identity: 41.38% |
Span: 174bp (16.2%) |
Frame: 1 |
| 30S ribosomal protein S1, chloroplastic OS=Porphyra yezoensis GN=rps1 PE=3 SV=2 |
| Match: P51345 |
score: 53.9 |
e-value: 3e-24 |
Identity: 42.37% |
Span: 177bp (16.5%) |
Frame: 1 |
| 30S ribosomal protein S1, chloroplastic OS=Porphyra purpurea GN=rps1 PE=3 SV=1 |
| Match: P50889 |
score: 53.1 |
e-value: 4e-23 |
Identity: 33.33% |
Span: 372bp (34.6%) |
Frame: 3 |
| 40S ribosomal protein S1 OS=Leuconostoc lactis GN=rps1 PE=2 SV=2 |
| Match: O06000 |
score: 40.8 |
e-value: 4e-18 |
Identity: 35.16% |
Span: 342bp (31.8%) |
Frame: 3 |
| 30S ribosomal protein S1 homolog OS=Bacillus cereus (strain ATCC 10987) GN=BCE_1625 PE=3 SV=1 |
| Match: Q97I09 |
score: 39.3 |
e-value: 4e-16 |
Identity: 24.81% |
Span: 363bp (33.8%) |
Frame: 3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium acetobutylicum GN=ispH PE=3 SV=1 |
|
| 55 lower scoring hits censored -- only 25 best hits are stored. |
