| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15229321|ref|NP_187112.1| |
score: 228 |
e-value: 1.8e-58 |
Identity: 49.1% |
Span: 828bp (77.0%) |
Frame: 1 |
| FLK (flowering locus KH domain); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi6175183|gb|AAF04909.1|A... |
| Match: gi|16924113|gb|AAL31692.1| |
score: 199.5 |
e-value: 7e-50 |
Identity: 39.89% |
Span: 1035bp (96.3%) |
Frame: 1 |
| gi|16924113|gb|AAL31692.1| putative RNA binding protein [Oryza sativa] |
| Match: gi|37536904|ref|NP_922754.1| |
score: 153.3 |
e-value: 5.7e-36 |
Identity: 38.87% |
Span: 723bp (67.3%) |
Frame: 1 |
| gi|37536904|ref|NP_922754.1| putative nucleic acid binding protein [Oryza sativa (japonica cultivar-group)] gi|125978... |
| Match: gi|15236094|ref|NP_194330.1| |
score: 117.5 |
e-value: 3.5e-25 |
Identity: 47.76% |
Span: 396bp (36.8%) |
Frame: 1 |
| PEP (PEPPER); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi4538929|emb|CAB39665.1| putative nucleic a... |
| Match: gi|37534332|ref|NP_921468.1| |
score: 116.7 |
e-value: 5.9e-25 |
Identity: 32.6% |
Span: 723bp (67.3%) |
Frame: 1 |
| gi|37534332|ref|NP_921468.1| unknown protein [Oryza sativa (japonica cultivar-group)] gi|31432070|gb|AAP53755.1| unkn... |
| Match: gi|15236094|ref|NP_194330.1| |
score: 95.52 |
e-value: 1.4e-18 |
Identity: 57.89% |
Span: 219bp (20.4%) |
Frame: 1 |
| PEP (PEPPER); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi4538929|emb|CAB39665.1| putative nucleic a... |
| Match: gi|18921324|gb|AAL82529.1| |
score: 88.2 |
e-value: 2.3e-16 |
Identity: 27.57% |
Span: 714bp (66.4%) |
Frame: 1 |
| gi|18921324|gb|AAL82529.1| putative nucleic acid binding protein [Oryza sativa] |
| Match: gi|11357886|pir||T49962 |
score: 82.8 |
e-value: 9.5e-15 |
Identity: 24.42% |
Span: 750bp (69.8%) |
Frame: 1 |
| gi|11357886|pir||T49962 hypothetical protein F8M21.160 - Arabidopsis thaliana gi|7671496|emb|CAB89337.1| putative pro... |
| Match: gi|30685269|ref|NP_851040.1| |
score: 82.8 |
e-value: 9.5e-15 |
Identity: 24.42% |
Span: 750bp (69.8%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30685276|ref|NP_197031.3| KH domain-containing protein [Arabid... |
| Match: gi|37535668|ref|NP_922136.1| |
score: 76.64 |
e-value: 6.8e-13 |
Identity: 27.63% |
Span: 666bp (62.0%) |
Frame: 1 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
| Match: gi|7486302|pir||T04533 |
score: 70.48 |
e-value: 4.9e-11 |
Identity: 27.1% |
Span: 627bp (58.3%) |
Frame: 1 |
| hypothetical protein F28J12.30 - Arabidopsis thaliana >gi2832642|emb|CAA16717.1| putative protein [Arabidopsis thalia... |
| Match: gi|15236863|ref|NP_193572.1| |
score: 70.48 |
e-value: 4.9e-11 |
Identity: 27.1% |
Span: 627bp (58.3%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-conta... |
| Match: gi|30684386|ref|NP_849406.1| |
score: 70.48 |
e-value: 4.9e-11 |
Identity: 27.1% |
Span: 627bp (58.3%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsi... |
| Match: gi|25518414|pir||C86275 |
score: 68.17 |
e-value: 2.4e-10 |
Identity: 24.25% |
Span: 744bp (69.2%) |
Frame: 1 |
| gi|25518414|pir||C86275 hypothetical protein [imported] - Arabidopsis thaliana gi|5080792|gb|AAD39302.1| Unknown prot... |
| Match: gi|28261403|gb|AAO37828.1| |
score: 67.4 |
e-value: 4.1e-10 |
Identity: 26.85% |
Span: 648bp (60.3%) |
Frame: 1 |
| HEN4 [Arabidopsis thaliana] |
| Match: gi|22328051|ref|NP_201244.2| |
score: 67.4 |
e-value: 4.1e-10 |
Identity: 26.85% |
Span: 648bp (60.3%) |
Frame: 1 |
| HEN4 (HUA ENHANCER 4); RNA binding / nucleic acid binding [Arabidopsis thaliana] |
| Match: gi|28261405|gb|AAO37829.1| |
score: 67.4 |
e-value: 4.1e-10 |
Identity: 26.85% |
Span: 648bp (60.3%) |
Frame: 1 |
| HEN4 isoform 2 [Arabidopsis thaliana] |
| Match: gi|30683629|ref|NP_172869.2| |
score: 67.01 |
e-value: 5.4e-10 |
Identity: 25.32% |
Span: 660bp (61.4%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana] >gi|1... |
| Match: gi|30685269|ref|NP_851040.1| |
score: 64.31 |
e-value: 3.5e-09 |
Identity: 32.54% |
Span: 375bp (34.9%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30685276|ref|NP_197031.3| KH domain-containing protein [Arabid... |
| Match: gi|34904418|ref|NP_913556.1| |
score: 64.31 |
e-value: 3.5e-09 |
Identity: 25.89% |
Span: 672bp (62.5%) |
Frame: 1 |
| gi|34904418|ref|NP_913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|7339705|dbj|BAA92910... |
| Match: gi|21553916|gb|AAM62999.1| |
score: 61.23 |
e-value: 1.5e-08 |
Identity: 26.85% |
Span: 627bp (58.3%) |
Frame: 1 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15237393|ref|NP_199431.1| |
score: 61.23 |
e-value: 1.5e-08 |
Identity: 26.85% |
Span: 627bp (58.3%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis t... |
| Match: gi|13605589|gb|AAK32788.1| |
score: 61.23 |
e-value: 1.5e-08 |
Identity: 26.85% |
Span: 627bp (58.3%) |
Frame: 1 |
| gi|13605589|gb|AAK32788.1| AT5g46190/MCL19_25 [Arabidopsis thaliana] |
| Match: gi|15217969|ref|NP_175569.1| |
score: 60.08 |
e-value: 6.6e-08 |
Identity: 24.55% |
Span: 660bp (61.4%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabi... |
| Match: gi|33516943|sp|Q9JKN6|NOA1_MOUSE |
score: 60.08 |
e-value: 6.6e-08 |
Identity: 24.79% |
Span: 696bp (64.7%) |
Frame: 1 |
| gi|33516943|sp|Q9JKN6|NOA1_MOUSE RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Ventral neuron-spe... |
| Match: gi|34865169|ref|XP_234098.2| |
score: 60.08 |
e-value: 6.6e-08 |
Identity: 24.79% |
Span: 696bp (64.7%) |
Frame: 1 |
| gi|34865169|ref|XP_234098.2| similar to RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ... |
| Match: gi|25518414|pir||C86275 |
score: 59.31 |
e-value: 1.1e-07 |
Identity: 23.83% |
Span: 639bp (59.4%) |
Frame: 1 |
| gi|25518414|pir||C86275 hypothetical protein [imported] - Arabidopsis thaliana gi|5080792|gb|AAD39302.1| Unknown prot... |
| Match: gi|30683629|ref|NP_172869.2| |
score: 59.31 |
e-value: 1.1e-07 |
Identity: 23.83% |
Span: 639bp (59.4%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana] >gi|1... |
| Match: gi|4505425|ref|NP_002506.1| |
score: 58.15 |
e-value: 2.5e-07 |
Identity: 24.07% |
Span: 696bp (64.7%) |
Frame: 1 |
| gi|4505425|ref|NP_002506.1| neuro-oncological ventral antigen 1 isoform 1; Neurooncological ventral antigen 1; parane... |
| Match: gi|33516919|sp|Q80WA4|NOA1_RAT |
score: 57 |
e-value: 5.6e-07 |
Identity: 24.89% |
Span: 696bp (64.7%) |
Frame: 1 |
| gi|33516919|sp|Q80WA4|NOA1_RAT RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) gi|30230625|gb|AAP208... |
| Match: gi|10947014|ref|NP_067543.1| |
score: 56.61 |
e-value: 7.3e-07 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|10947014|ref|NP_067543.1| poly(rC) binding protein 3; poly(rC)-binding protein 3 [Mus musculus] gi|12230428|sp|P57... |
| Match: gi|21553916|gb|AAM62999.1| |
score: 56.22 |
e-value: 9.5e-07 |
Identity: 28.33% |
Span: 360bp (33.5%) |
Frame: 1 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15237393|ref|NP_199431.1| |
score: 56.22 |
e-value: 9.5e-07 |
Identity: 28.33% |
Span: 360bp (33.5%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis t... |
| Match: gi|13605589|gb|AAK32788.1| |
score: 56.22 |
e-value: 9.5e-07 |
Identity: 28.33% |
Span: 360bp (33.5%) |
Frame: 1 |
| gi|13605589|gb|AAK32788.1| AT5g46190/MCL19_25 [Arabidopsis thaliana] |
| Match: gi|5902724|ref|NP_002507.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 23.66% |
Span: 777bp (72.3%) |
Frame: 1 |
| gi|5902724|ref|NP_002507.1| neuro-oncological ventral antigen 2; neuro-oncological ventral antigen 3 [Homo sapiens] g... |
| Match: gi|18921324|gb|AAL82529.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 28% |
Span: 375bp (34.9%) |
Frame: 1 |
| gi|18921324|gb|AAL82529.1| putative nucleic acid binding protein [Oryza sativa] |
| Match: gi|26348076|dbj|BAC37686.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus] |
| Match: gi|34855285|ref|XP_214825.2| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 24.55% |
Span: 663bp (61.7%) |
Frame: 1 |
| gi|34855285|ref|XP_214825.2| similar to astrocytic NOVA-like RNA-binding protein [Rattus norvegicus] |
| Match: gi|15082311|gb|AAH12061.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens] |
| Match: gi|21753335|dbj|BAC04327.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|21753335|dbj|BAC04327.1| unnamed protein product [Homo sapiens] |
| Match: gi|10092617|ref|NP_065389.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|10092617|ref|NP_065389.1| poly(rC) binding protein 3; poly(rC)-binding protein 3; poly (rC)-binding protein 3 [Hom... |
| Match: gi|27503479|gb|AAH42440.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus] |
| Match: gi|2673961|gb|AAB88661.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 23.66% |
Span: 777bp (72.3%) |
Frame: 1 |
| gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens] |
| Match: gi|26330216|dbj|BAC28838.1| |
score: 55.84 |
e-value: 1.2e-06 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus] |
| Match: gi|11357886|pir||T49962 |
score: 55.45 |
e-value: 1.6e-06 |
Identity: 28.69% |
Span: 363bp (33.8%) |
Frame: 1 |
| gi|11357886|pir||T49962 hypothetical protein F8M21.160 - Arabidopsis thaliana gi|7671496|emb|CAB89337.1| putative pro... |
| Match: gi|6031187|ref|NP_006480.1| |
score: 55.07 |
e-value: 2.1e-06 |
Identity: 24.17% |
Span: 696bp (64.7%) |
Frame: 1 |
| gi|6031187|ref|NP_006480.1| neuro-oncological ventral antigen 1 isoform 2; Neurooncological ventral antigen 1; parane... |
| Match: gi|4235140|gb|AAD13116.1| |
score: 54.3 |
e-value: 3.6e-06 |
Identity: 24.11% |
Span: 663bp (61.7%) |
Frame: 1 |
| gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492]; astrocytic NOVA-like RNA-binding protein [Homo sapi... |
| Match: gi|30696273|ref|NP_200118.3| |
score: 51.99 |
e-value: 1.8e-05 |
Identity: 29.41% |
Span: 384bp (35.7%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis ... |
| Match: gi|8809595|dbj|BAA97146.1| |
score: 51.99 |
e-value: 1.8e-05 |
Identity: 29.41% |
Span: 384bp (35.7%) |
Frame: 1 |
| RNA-binding protein-like [Arabidopsis thaliana] |
| Match: gi|444021|emb|CAA82631.1| |
score: 50.83 |
e-value: 4e-05 |
Identity: 24.29% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens] |
| Match: gi|6754994|ref|NP_035995.1| |
score: 50.83 |
e-value: 4e-05 |
Identity: 24.29% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|6754994|ref|NP_035995.1| poly(rC) binding protein 1; poly(rC)-binding protein 1 [Mus musculus] gi|12230408|sp|O190... |
| Match: gi|5453854|ref|NP_006187.1| |
score: 50.83 |
e-value: 4e-05 |
Identity: 24.29% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|5453854|ref|NP_006187.1| poly(rC) binding protein 1; heterogenous nuclear ribonucleoprotein X; poly(rC)-binding pr... |
| Match: gi|14670369|ref|NP_127501.1| |
score: 49.68 |
e-value: 8.9e-05 |
Identity: 24.15% |
Span: 708bp (65.9%) |
Frame: 1 |
| gi|14670369|ref|NP_127501.1| poly(rC) binding protein 4 isoform c; RNA binding protein MCG10; poly(rC)-binding protei... |
| Match: gi|14141168|ref|NP_005007.2| |
score: 48.91 |
e-value: 0.00015 |
Identity: 25.23% |
Span: 654bp (60.8%) |
Frame: 1 |
| gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a; poly(rC)-binding protein 2; alpha-CP2; heterogenou... |
| Match: gi|37535668|ref|NP_922136.1| |
score: 48.91 |
e-value: 0.00015 |
Identity: 23.73% |
Span: 354bp (32.9%) |
Frame: 1 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
| Match: gi|34852374|ref|XP_215373.2| |
score: 48.91 |
e-value: 0.00015 |
Identity: 25.27% |
Span: 546bp (50.8%) |
Frame: 1 |
| gi|34852374|ref|XP_215373.2| similar to poly(rC) binding protein 3; poly(rC)-binding protein 3; poly (rC)-binding pro... |
| Match: gi|15225229|ref|NP_180167.1| |
score: 48.91 |
e-value: 0.00015 |
Identity: 41.1% |
Span: 216bp (20.1%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi19310435|gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thalian... |
| Match: gi|6707736|sp|Q15366|PCB2_HUMAN |
score: 48.91 |
e-value: 0.00015 |
Identity: 25.23% |
Span: 654bp (60.8%) |
Frame: 1 |
| gi|6707736|sp|Q15366|PCB2_HUMAN Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2) gi|542853|pir||S42471 hnRNP protein... |
| Match: gi|14141166|ref|NP_114366.1| |
score: 48.52 |
e-value: 0.0002 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b; poly(rC)-binding protein 2; alpha-CP2; heterogenou... |
| Match: gi|495128|emb|CAA53546.1| |
score: 48.52 |
e-value: 0.0002 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|495128|emb|CAA53546.1| mCBP [Mus musculus] |
| Match: gi|6997239|ref|NP_035172.1| |
score: 48.52 |
e-value: 0.0002 |
Identity: 25.24% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|6997239|ref|NP_035172.1| poly(rC) binding protein 2; heterogeneous nuclear ribonucleoprotein X [Mus musculus] gi|1... |
| Match: gi|34865871|ref|XP_343469.1| |
score: 48.52 |
e-value: 0.0002 |
Identity: 23.85% |
Span: 654bp (60.8%) |
Frame: 1 |
| gi|34865871|ref|XP_343469.1| similar to poly(rC) binding protein 4 [Rattus norvegicus] |
| Match: gi|34904418|ref|NP_913556.1| |
score: 48.14 |
e-value: 0.00026 |
Identity: 33.33% |
Span: 282bp (26.2%) |
Frame: 1 |
| gi|34904418|ref|NP_913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|7339705|dbj|BAA92910... |
| Match: gi|12837891|dbj|BAB23990.1| |
score: 47.37 |
e-value: 0.00044 |
Identity: 23.61% |
Span: 648bp (60.3%) |
Frame: 1 |
| gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus] |
| Match: gi|12230430|sp|P57724|PCB4_MOUSE |
score: 47.37 |
e-value: 0.00044 |
Identity: 23.61% |
Span: 648bp (60.3%) |
Frame: 1 |
| gi|12230430|sp|P57724|PCB4_MOUSE Poly(rC)-binding protein 4 (Alpha-CP4) gi|9957163|gb|AAG09239.1| alphaCP-4 [Mus musc... |
| Match: gi|14715061|gb|AAH10694.1| |
score: 47.37 |
e-value: 0.00044 |
Identity: 23.61% |
Span: 648bp (60.3%) |
Frame: 1 |
| gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus] |
| Match: gi|31981202|ref|NP_067542.2| |
score: 46.59 |
e-value: 0.00076 |
Identity: 23.81% |
Span: 630bp (58.6%) |
Frame: 1 |
| gi|31981202|ref|NP_067542.2| poly(rC) binding protein 4; poly(rC)-binding protein 4 [Mus musculus] gi|26346528|dbj|BA... |
| Match: gi|16877720|gb|AAH17098.1| |
score: 46.21 |
e-value: 0.001 |
Identity: 24.51% |
Span: 738bp (68.7%) |
Frame: 1 |
| gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens] |
| Match: gi|15227534|ref|NP_178410.1| |
score: 46.21 |
e-value: 0.001 |
Identity: 29.63% |
Span: 303bp (28.2%) |
Frame: 1 |
| gi|15227534|ref|NP_178410.1| KH domain protein [Arabidopsis thaliana] gi|7487149|pir||T02715 probable RNA-binding pro... |
| Match: gi|33150676|gb|AAP97216.1| |
score: 45.44 |
e-value: 0.002 |
Identity: 21.52% |
Span: 708bp (65.9%) |
Frame: 1 |
| gi|33150676|gb|AAP97216.1| CBP [Homo sapiens] |
| Match: gi|33604078|gb|AAH56323.1| |
score: 45.05 |
e-value: 0.002 |
Identity: 23.46% |
Span: 537bp (50.0%) |
Frame: 1 |
| gi|33604078|gb|AAH56323.1| Unknown (protein for MGC:65870) [Danio rerio] |
| Match: gi|38086001|ref|XP_357715.1| |
score: 44.28 |
e-value: 0.004 |
Identity: 33.33% |
Span: 216bp (20.1%) |
Frame: 1 |
| gi|38086001|ref|XP_357715.1| similar to astrocytic NOVA-like RNA-binding protein [Mus musculus] |
| Match: gi|15236863|ref|NP_193572.1| |
score: 43.9 |
e-value: 0.005 |
Identity: 25% |
Span: 360bp (33.5%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-conta... |
| Match: gi|30684386|ref|NP_849406.1| |
score: 43.9 |
e-value: 0.005 |
Identity: 25% |
Span: 360bp (33.5%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsi... |
| Match: gi|34853556|ref|XP_342410.1| |
score: 43.13 |
e-value: 0.008 |
Identity: 27.41% |
Span: 378bp (35.2%) |
Frame: 1 |
| gi|34853556|ref|XP_342410.1| similar to FUSE binding protein 3 [Rattus norvegicus] |
| Match: gi|38074611|ref|XP_130112.3| |
score: 43.13 |
e-value: 0.008 |
Identity: 27.41% |
Span: 378bp (35.2%) |
Frame: 1 |
| gi|38074611|ref|XP_130112.3| RIKEN cDNA A330051M14 gene [Mus musculus] |
| Match: gi|4504865|ref|NP_003676.1| |
score: 42.74 |
e-value: 0.011 |
Identity: 23.72% |
Span: 639bp (59.4%) |
Frame: 1 |
| gi|4504865|ref|NP_003676.1| KH-type splicing regulatory protein (FUSE binding protein 2); KH-type splicing regulatory... |
| Match: gi|19424312|ref|NP_598286.1| |
score: 42.74 |
e-value: 0.011 |
Identity: 23.72% |
Span: 639bp (59.4%) |
Frame: 1 |
| gi|19424312|ref|NP_598286.1| MAP2 RNA trans-acting protein MARTA1 [Rattus norvegicus] gi|37078084|sp|Q99PF5|FUB2_RAT ... |
| Match: gi|19075184|ref|NP_587684.1| |
score: 41.97 |
e-value: 0.019 |
Identity: 27.36% |
Span: 297bp (27.6%) |
Frame: 1 |
| gi|19075184|ref|NP_587684.1| RNA-binding protein; contains KH domain; putative polyadenylation factor; similar to S. ... |
| Match: gi|28212254|ref|NP_783184.1| |
score: 41.59 |
e-value: 0.024 |
Identity: 26.19% |
Span: 354bp (32.9%) |
Frame: 1 |
| gi|28212254|ref|NP_783184.1| IGF-II mRNA-binding protein 1; insulin-like growth factor 2, binding protein 1 [Rattus n... |
| Match: gi|26336871|dbj|BAC32119.1| |
score: 41.59 |
e-value: 0.024 |
Identity: 26.19% |
Span: 354bp (32.9%) |
Frame: 1 |
| gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus] |
| Match: gi|6753518|ref|NP_034081.1| |
score: 41.59 |
e-value: 0.024 |
Identity: 26.19% |
Span: 354bp (32.9%) |
Frame: 1 |
| gi|6753518|ref|NP_034081.1| insulin-like growth factor 2, binding protein 1; coding region determinant binding protei... |
| Match: gi|30354044|gb|AAH51679.1| |
score: 41.59 |
e-value: 0.024 |
Identity: 26.19% |
Span: 354bp (32.9%) |
Frame: 1 |
| gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2, binding protein 1 [Mus musculus] |
| Match: gi|4191608|gb|AAD09826.1| |
score: 41.59 |
e-value: 0.024 |
Identity: 26.19% |
Span: 354bp (32.9%) |
Frame: 1 |
| gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens] |
| Match: gi|21361352|ref|NP_006537.2| |
score: 41.59 |
e-value: 0.024 |
Identity: 26.19% |
Span: 354bp (32.9%) |
Frame: 1 |
| gi|21361352|ref|NP_006537.2| IGF-II mRNA-binding protein 1 [Homo sapiens] gi|7141072|gb|AAF37203.1| mRNA-binding prot... |
| Match: gi|38050512|ref|XP_356585.1| |
score: 41.59 |
e-value: 0.024 |
Identity: 25.93% |
Span: 312bp (29.0%) |
Frame: 1 |
| gi|38050512|ref|XP_356585.1| neuro-oncological ventral antigen 1 [Mus musculus] |
| Match: gi|28302384|gb|AAH46731.1| |
score: 41.2 |
e-value: 0.032 |
Identity: 34.72% |
Span: 216bp (20.1%) |
Frame: 1 |
| gi|28302384|gb|AAH46731.1| MGC53786 protein [Xenopus laevis] |
| Match: gi|34904418|ref|NP_913556.1| |
score: 40.82 |
e-value: 0.041 |
Identity: 40.38% |
Span: 156bp (14.5%) |
Frame: 1 |
| gi|34904418|ref|NP_913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|7339705|dbj|BAA92910... |
| Match: gi|33150676|gb|AAP97216.1| |
score: 40.05 |
e-value: 0.071 |
Identity: 36.49% |
Span: 222bp (20.7%) |
Frame: 1 |
| gi|33150676|gb|AAP97216.1| CBP [Homo sapiens] |
| Match: gi|10947014|ref|NP_067543.1| |
score: 39.66 |
e-value: 0.092 |
Identity: 30.59% |
Span: 255bp (23.7%) |
Frame: 1 |
| gi|10947014|ref|NP_067543.1| poly(rC) binding protein 3; poly(rC)-binding protein 3 [Mus musculus] gi|12230428|sp|P57... |
| Match: gi|34852374|ref|XP_215373.2| |
score: 39.66 |
e-value: 0.092 |
Identity: 30.59% |
Span: 255bp (23.7%) |
Frame: 1 |
| gi|34852374|ref|XP_215373.2| similar to poly(rC) binding protein 3; poly(rC)-binding protein 3; poly (rC)-binding pro... |
| Match: gi|27503479|gb|AAH42440.1| |
score: 39.66 |
e-value: 0.092 |
Identity: 30.59% |
Span: 255bp (23.7%) |
Frame: 1 |
| gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus] |
| Match: gi|10092617|ref|NP_065389.1| |
score: 39.66 |
e-value: 0.092 |
Identity: 30.59% |
Span: 255bp (23.7%) |
Frame: 1 |
| gi|10092617|ref|NP_065389.1| poly(rC) binding protein 3; poly(rC)-binding protein 3; poly (rC)-binding protein 3 [Hom... |
| Match: gi|21753335|dbj|BAC04327.1| |
score: 39.66 |
e-value: 0.092 |
Identity: 30.59% |
Span: 255bp (23.7%) |
Frame: 1 |
| gi|21753335|dbj|BAC04327.1| unnamed protein product [Homo sapiens] |
| Match: gi|15082311|gb|AAH12061.1| |
score: 39.66 |
e-value: 0.092 |
Identity: 30.59% |
Span: 255bp (23.7%) |
Frame: 1 |
| gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens] |
| Match: gi|26330216|dbj|BAC28838.1| |
score: 39.66 |
e-value: 0.092 |
Identity: 30.59% |
Span: 255bp (23.7%) |
Frame: 1 |
| gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus] |
| Match: gi|26348076|dbj|BAC37686.1| |
score: 39.66 |
e-value: 0.092 |
Identity: 30.59% |
Span: 255bp (23.7%) |
Frame: 1 |
| gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus] |
| Match: gi|15237393|ref|NP_199431.1| |
score: 20.79 |
e-value: 1.5e-08 |
Identity: 34.21% |
Span: 114bp (10.6%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis t... |
| Match: gi|13605589|gb|AAK32788.1| |
score: 20.79 |
e-value: 1.5e-08 |
Identity: 34.21% |
Span: 114bp (10.6%) |
Frame: 2 |
| gi|13605589|gb|AAK32788.1| AT5g46190/MCL19_25 [Arabidopsis thaliana] |
| Match: gi|21553916|gb|AAM62999.1| |
score: 20.79 |
e-value: 1.5e-08 |
Identity: 34.21% |
Span: 114bp (10.6%) |
Frame: 2 |
| unknown [Arabidopsis thaliana] |
|
| 21 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 28 hits recorded |
| Match: At3g04610.1 |
score: 228 |
e-value: 6e-60 |
Identity: 49.1% |
Span: 828bp (77.0%) |
Frame: 1 |
| At3g04610.1 68410.m00455 KH domain protein similar putative nucleic acid binding protein GB:CAB39665 [Arabidopsis tha... |
| Match: At4g26000.1 |
score: 117.5 |
e-value: 1.1e-26 |
Identity: 47.76% |
Span: 396bp (36.8%) |
Frame: 1 |
| At4g26000.1 68411.m03409 KH domain protein single-stranded nucleic acid-binding protein CBP - mouse, PIR2:S78515 |
| Match: At4g26000.1 |
score: 95.52 |
e-value: 4.6e-20 |
Identity: 57.89% |
Span: 219bp (20.4%) |
Frame: 1 |
| At4g26000.1 68411.m03409 KH domain protein single-stranded nucleic acid-binding protein CBP - mouse, PIR2:S78515 |
| Match: At5g15270.1 |
score: 82.8 |
e-value: 3.1e-16 |
Identity: 24.42% |
Span: 750bp (69.8%) |
Frame: 1 |
| At5g15270.1 68412.m07802 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g15270.2 |
score: 82.8 |
e-value: 3.1e-16 |
Identity: 24.42% |
Span: 750bp (69.8%) |
Frame: 1 |
| At5g15270.2 68412.m07803 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At4g18375.2 |
score: 70.48 |
e-value: 1.6e-12 |
Identity: 27.1% |
Span: 627bp (58.3%) |
Frame: 1 |
| At4g18375.2 68411.m02488 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At4g18375.1 |
score: 70.48 |
e-value: 1.6e-12 |
Identity: 27.1% |
Span: 627bp (58.3%) |
Frame: 1 |
| At4g18375.1 68411.m02487 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At5g64390.1 |
score: 67.4 |
e-value: 1.4e-11 |
Identity: 26.85% |
Span: 648bp (60.3%) |
Frame: 1 |
| At5g64390.1 68412.m07317 KH domain protein contains similarity to RNA-binding protein |
| Match: At1g14170.1 |
score: 67.01 |
e-value: 1.8e-11 |
Identity: 25.32% |
Span: 660bp (61.4%) |
Frame: 1 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At5g15270.1 |
score: 64.31 |
e-value: 1.1e-10 |
Identity: 32.54% |
Span: 375bp (34.9%) |
Frame: 1 |
| At5g15270.1 68412.m07802 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g15270.2 |
score: 64.31 |
e-value: 1.1e-10 |
Identity: 32.54% |
Span: 375bp (34.9%) |
Frame: 1 |
| At5g15270.2 68412.m07803 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At1g51580.1 |
score: 61.62 |
e-value: 7.4e-10 |
Identity: 24.77% |
Span: 651bp (60.6%) |
Frame: 1 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At5g46190.1 |
score: 61.23 |
e-value: 4.9e-10 |
Identity: 26.85% |
Span: 627bp (58.3%) |
Frame: 1 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
| Match: At1g51580.1 |
score: 60.08 |
e-value: 2.2e-09 |
Identity: 24.55% |
Span: 660bp (61.4%) |
Frame: 1 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At1g14170.1 |
score: 59.31 |
e-value: 3.7e-09 |
Identity: 23.83% |
Span: 639bp (59.4%) |
Frame: 1 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At5g53060.1 |
score: 58.15 |
e-value: 8.2e-09 |
Identity: 25.68% |
Span: 705bp (65.6%) |
Frame: 1 |
| At5g53060.1 68412.m05959 KH domain protein |
| Match: At5g46190.1 |
score: 56.22 |
e-value: 3.1e-08 |
Identity: 28.33% |
Span: 360bp (33.5%) |
Frame: 1 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
| Match: At2g25970.1 |
score: 48.91 |
e-value: 5e-06 |
Identity: 41.1% |
Span: 216bp (20.1%) |
Frame: 1 |
| At2g25970.1 68409.m02825 KH domain protein |
| Match: At2g03110.1 |
score: 46.21 |
e-value: 3.2e-05 |
Identity: 29.63% |
Span: 303bp (28.2%) |
Frame: 1 |
| At2g03110.1 68409.m00230 KH domain protein |
| Match: At4g18375.1 |
score: 43.9 |
e-value: 0.00016 |
Identity: 25% |
Span: 360bp (33.5%) |
Frame: 1 |
| At4g18375.1 68411.m02487 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At4g18375.2 |
score: 43.9 |
e-value: 0.00016 |
Identity: 25% |
Span: 360bp (33.5%) |
Frame: 1 |
| At4g18375.2 68411.m02488 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At2g22600.1 |
score: 40.43 |
e-value: 0.002 |
Identity: 22.51% |
Span: 681bp (63.3%) |
Frame: 1 |
| At2g22600.1 68409.m02429 KH domain protein |
| Match: At5g04430.2 |
score: 38.12 |
e-value: 0.009 |
Identity: 30.34% |
Span: 267bp (24.8%) |
Frame: 1 |
| At5g04430.2 68412.m08203 KH domain protein Nova, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70... |
| Match: At5g04430.1 |
score: 38.12 |
e-value: 0.009 |
Identity: 30.34% |
Span: 267bp (24.8%) |
Frame: 1 |
| At5g04430.1 68412.m08202 KH domain protein Nova, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70... |
| Match: At5g09560.1 |
score: 37.35 |
e-value: 0.015 |
Identity: 21.2% |
Span: 648bp (60.3%) |
Frame: 1 |
| At5g09560.1 68412.m01023 KH domain protein various predicted RNA binding proteins, Arabidopsis thaliana |
| Match: At5g04430.2 |
score: 36.96 |
e-value: 0.02 |
Identity: 51.52% |
Span: 99bp (9.2%) |
Frame: 1 |
| At5g04430.2 68412.m08203 KH domain protein Nova, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70... |
| Match: At5g04430.1 |
score: 36.96 |
e-value: 0.02 |
Identity: 51.52% |
Span: 99bp (9.2%) |
Frame: 1 |
| At5g04430.1 68412.m08202 KH domain protein Nova, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70... |
| Match: At5g46190.1 |
score: 20.79 |
e-value: 4.9e-10 |
Identity: 34.21% |
Span: 114bp (10.6%) |
Frame: 2 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
|
