| genbank/nr [blastx] | Showing best 46 hits recorded |
| Match: gi|38230504|gb|AAR14273.1| |
score: 308.9 |
e-value: 8.3e-83 |
Identity: 52.42% |
Span: 957bp (88.4%) |
Frame: 3 |
| predicted protein [Populus tremula x Populus alba] |
| Match: gi|33146675|dbj|BAC80021.1| |
score: 257.7 |
e-value: 2.2e-67 |
Identity: 45.15% |
Span: 1023bp (94.5%) |
Frame: 3 |
| putative DAZ associated protein 1 [Oryza sativa Japonica Group] |
| Match: gi|30684113|ref|NP_568277.2| |
score: 232.3 |
e-value: 9.8e-60 |
Identity: 48.37% |
Span: 882bp (81.5%) |
Frame: 3 |
| gi|30684113|ref|NP_568277.2| expressed protein [Arabidopsis thaliana] |
| Match: gi|14586374|emb|CAC42905.1| |
score: 232.3 |
e-value: 9.8e-60 |
Identity: 48.37% |
Span: 882bp (81.5%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|26453236|dbj|BAC43691.1| |
score: 232.3 |
e-value: 9.8e-60 |
Identity: 48.37% |
Span: 882bp (81.5%) |
Frame: 3 |
| gi|26453236|dbj|BAC43691.1| unknown protein [Arabidopsis thaliana] gi|27311807|gb|AAO00869.1| putative protein [Arabi... |
| Match: gi|15231090|ref|NP_190763.1| |
score: 226.5 |
e-value: 5.4e-58 |
Identity: 46.89% |
Span: 903bp (83.5%) |
Frame: 3 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi793... |
| Match: gi|21594547|gb|AAM66020.1| |
score: 226.5 |
e-value: 5.4e-58 |
Identity: 46.89% |
Span: 903bp (83.5%) |
Frame: 3 |
| unknown [Arabidopsis thaliana] |
| Match: gi|22331232|ref|NP_188747.2| |
score: 225.7 |
e-value: 9.2e-58 |
Identity: 45.72% |
Span: 900bp (83.2%) |
Frame: 3 |
| gi|22331232|ref|NP_188747.2| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|19423979|gb|AAL87320.1| |
score: 224.6 |
e-value: 2.1e-57 |
Identity: 46.89% |
Span: 903bp (83.5%) |
Frame: 3 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|11994270|dbj|BAB01453.1| |
score: 223.4 |
e-value: 4.6e-57 |
Identity: 46.58% |
Span: 864bp (79.9%) |
Frame: 3 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|30695000|ref|NP_849792.1| |
score: 192.2 |
e-value: 1.1e-47 |
Identity: 39.64% |
Span: 981bp (90.7%) |
Frame: 3 |
| gi|30695000|ref|NP_849792.1| expressed protein [Arabidopsis thaliana] |
| Match: gi|15229435|ref|NP_191904.1| |
score: 185.7 |
e-value: 1.1e-45 |
Identity: 53.03% |
Span: 594bp (54.9%) |
Frame: 3 |
| gi|15229435|ref|NP_191904.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|11357942|pir||T... |
| Match: gi|15217946|ref|NP_175563.1| |
score: 178.3 |
e-value: 1.7e-43 |
Identity: 51.02% |
Span: 570bp (52.7%) |
Frame: 3 |
| gi|15217946|ref|NP_175563.1| expressed protein [Arabidopsis thaliana] gi|25405474|pir||F96553 unknown protein, 33958-... |
| Match: gi|15224480|ref|NP_178588.1| |
score: 128.3 |
e-value: 2e-28 |
Identity: 57.52% |
Span: 339bp (31.3%) |
Frame: 3 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi753... |
| Match: gi|27817837|dbj|BAC55605.1| |
score: 110.9 |
e-value: 3.3e-23 |
Identity: 62.03% |
Span: 237bp (21.9%) |
Frame: 3 |
| gi|27817837|dbj|BAC55605.1| RRM-containing protein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15231722|ref|NP_190866.1| |
score: 98.6 |
e-value: 1.7e-19 |
Identity: 55.43% |
Span: 276bp (25.5%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi7529722|emb|CAB86902.1| putative protein [Ar... |
| Match: gi|15217947|ref|NP_175564.1| |
score: 72.02 |
e-value: 1.7e-11 |
Identity: 27.76% |
Span: 867bp (80.1%) |
Frame: 3 |
| gi|15217947|ref|NP_175564.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|25405475|pir||G... |
| Match: gi|27817839|dbj|BAC55607.1| |
score: 55.84 |
e-value: 1.3e-06 |
Identity: 38.37% |
Span: 246bp (22.7%) |
Frame: 3 |
| gi|27817839|dbj|BAC55607.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|28829795|gb|AAO52297.1| |
score: 50.06 |
e-value: 6.9e-05 |
Identity: 23.33% |
Span: 441bp (40.8%) |
Frame: 3 |
| gi|28829795|gb|AAO52297.1| similar to Plasmodium falciparum. Cell differentiation protein rcd1, putative [Dictyosteli... |
| Match: gi|14133650|gb|AAK54090.1| |
score: 45.82 |
e-value: 0.001 |
Identity: 25.42% |
Span: 510bp (47.1%) |
Frame: 3 |
| gi|14133650|gb|AAK54090.1| histidine kinase DhkI [Dictyostelium discoideum] |
| Match: gi|28828415|gb|AAO51038.1| |
score: 45.82 |
e-value: 0.001 |
Identity: 25.42% |
Span: 510bp (47.1%) |
Frame: 3 |
| gi|28828415|gb|AAO51038.1| similar to Dictyostelium discoideum (Slime mold). Histidine kinase DhkI |
| Match: gi|27817839|dbj|BAC55607.1| |
score: 44.28 |
e-value: 0.004 |
Identity: 36.92% |
Span: 186bp (17.2%) |
Frame: 3 |
| gi|27817839|dbj|BAC55607.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34872583|ref|XP_222200.2| |
score: 43.51 |
e-value: 0.006 |
Identity: 31.07% |
Span: 297bp (27.4%) |
Frame: 3 |
| gi|34872583|ref|XP_222200.2| similar to RIKEN cDNA 1200009A02 [Rattus norvegicus] |
| Match: gi|8778468|gb|AAF79476.1| |
score: 42.74 |
e-value: 0.011 |
Identity: 32.35% |
Span: 192bp (17.7%) |
Frame: 3 |
| gi|8778468|gb|AAF79476.1| F1L3.34 [Arabidopsis thaliana] |
| Match: gi|15220810|ref|NP_173208.1| |
score: 42.74 |
e-value: 0.011 |
Identity: 32.35% |
Span: 192bp (17.7%) |
Frame: 3 |
| gi|15220810|ref|NP_173208.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|28828201|gb|AAO50882.1| |
score: 42.36 |
e-value: 0.014 |
Identity: 23.74% |
Span: 417bp (38.5%) |
Frame: 3 |
| gi|28828201|gb|AAO50882.1| hypothetical protein [Dictyostelium discoideum] |
| Match: gi|28829861|gb|AAL96744.2| |
score: 42.36 |
e-value: 0.014 |
Identity: 22.67% |
Span: 510bp (47.1%) |
Frame: 3 |
| gi|28829861|gb|AAL96744.2| similar to Dictyostelium discoideum (Slime mold). Homeobox-containing protein (Fragment) |
| Match: gi|30682553|ref|NP_683559.2| |
score: 41.97 |
e-value: 0.019 |
Identity: 27.59% |
Span: 327bp (30.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi11994764|dbj|BAB03120.1| unnamed protein pro... |
| Match: gi|20066260|gb|AAM09367.1| |
score: 41.59 |
e-value: 0.025 |
Identity: 21.5% |
Span: 600bp (55.5%) |
Frame: 3 |
| gi|20066260|gb|AAM09367.1| similar to Dictyostelium discoideum (Slime mold). TRFA |
| Match: gi|7489907|pir||S71629 |
score: 41.2 |
e-value: 0.032 |
Identity: 20.17% |
Span: 348bp (32.2%) |
Frame: 3 |
| gi|7489907|pir||S71629 sensory transduction histidine kinase dhkA - slime mold (Dictyostelium discoideum) |
| Match: gi|1136289|gb|AAC47300.1| |
score: 41.2 |
e-value: 0.032 |
Identity: 20.17% |
Span: 348bp (32.2%) |
Frame: 3 |
| gi|1136289|gb|AAC47300.1| histidine kinase A |
| Match: gi|28828920|gb|AAO51506.1| |
score: 41.2 |
e-value: 0.032 |
Identity: 23.39% |
Span: 495bp (45.7%) |
Frame: 3 |
| gi|28828920|gb|AAO51506.1| similar to Dictyostelium discoideum (Slime mold). Histidine kinase A |
| Match: gi|22328624|ref|NP_193166.2| |
score: 41.2 |
e-value: 0.032 |
Identity: 43.14% |
Span: 141bp (13.0%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative [Arabidopsis thaliana] >gi18152698|emb|CAC83517.1... |
| Match: gi|7439958|pir||G71404 |
score: 41.2 |
e-value: 0.032 |
Identity: 43.14% |
Span: 141bp (13.0%) |
Frame: 3 |
| gi|7439958|pir||G71404 probable ribonucleoprotein - Arabidopsis thaliana gi|2244786|emb|CAB10209.1| ribonucleoprotein... |
| Match: gi|25147051|ref|NP_741783.1| |
score: 40.82 |
e-value: 0.042 |
Identity: 30.7% |
Span: 330bp (30.5%) |
Frame: 3 |
| gi|25147051|ref|NP_741783.1| heterogeneous nuclear ribonucleoprotein A1 (37.8 kD) (XF837) [Caenorhabditis elegans] gi... |
| Match: gi|25513662|pir||F89530 |
score: 40.82 |
e-value: 0.042 |
Identity: 30.7% |
Span: 330bp (30.5%) |
Frame: 3 |
| gi|25513662|pir||F89530 protein H28G03.1 [imported] - Caenorhabditis elegans |
| Match: gi|25147054|ref|NP_741785.1| |
score: 40.82 |
e-value: 0.042 |
Identity: 30.7% |
Span: 330bp (30.5%) |
Frame: 3 |
| gi|25147054|ref|NP_741785.1| heterogeneous nuclear ribonucleoprotein A1 (XF837) [Caenorhabditis elegans] gi|17402834|... |
| Match: gi|31201431|ref|XP_309663.1| |
score: 40.82 |
e-value: 0.042 |
Identity: 38.1% |
Span: 189bp (17.5%) |
Frame: 3 |
| gi|31201431|ref|XP_309663.1| ENSANGP00000019748 [Anopheles gambiae] gi|30178392|gb|EAA05403.2| ENSANGP00000019748 [An... |
| Match: gi|25147057|ref|NP_741784.1| |
score: 40.82 |
e-value: 0.042 |
Identity: 30.7% |
Span: 330bp (30.5%) |
Frame: 3 |
| gi|25147057|ref|NP_741784.1| heterogeneous nuclear ribonucleoprotein A1 (37.7 kD) (XF837) [Caenorhabditis elegans] gi... |
| Match: gi|9758187|dbj|BAB08572.1| |
score: 40.43 |
e-value: 0.055 |
Identity: 38.46% |
Span: 144bp (13.3%) |
Frame: 3 |
| RNA-binding protein-like [Arabidopsis thaliana] |
| Match: gi|28850298|gb|AAM45327.2| |
score: 40.43 |
e-value: 0.055 |
Identity: 25.44% |
Span: 480bp (44.4%) |
Frame: 3 |
| gi|28850298|gb|AAM45327.2| similar to Plasmodium falciparum. Hypothetical protein [Dictyostelium discoideum] |
| Match: gi|30696616|ref|NP_851195.1| |
score: 40.43 |
e-value: 0.055 |
Identity: 38.46% |
Span: 144bp (13.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|22531168|gb|AAM97088.1| |
score: 40.43 |
e-value: 0.055 |
Identity: 38.46% |
Span: 144bp (13.3%) |
Frame: 3 |
| RNA-binding protein-like [Arabidopsis thaliana] |
| Match: gi|18423760|ref|NP_568826.1| |
score: 40.43 |
e-value: 0.055 |
Identity: 38.46% |
Span: 144bp (13.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi42573682|ref|NP_974937.1| RNA recognition mo... |
| Match: gi|26517854|gb|AAN78319.1| |
score: 40.43 |
e-value: 0.055 |
Identity: 21.37% |
Span: 351bp (32.4%) |
Frame: 3 |
| gi|26517854|gb|AAN78319.1| cGMP-specific phosphodiesterase [Dictyostelium discoideum] |
| Match: gi|13488613|gb|AAK26172.1| |
score: 39.66 |
e-value: 0.094 |
Identity: 33.75% |
Span: 228bp (21.1%) |
Frame: 3 |
| gi|13488613|gb|AAK26172.1| proline-rich Vg1 mRNA-binding protein [Xenopus laevis] |
|
| arabidopsis/peptide [blastx] | Showing best 21 hits recorded |
| Match: At5g12440.1 |
score: 232.3 |
e-value: 3.2e-61 |
Identity: 48.37% |
Span: 882bp (81.5%) |
Frame: 3 |
| At5g12440.1 68412.m01352 expressed protein similarity to predicted proteins, Arabidopsis thaliana |
| Match: At3g51950.1 |
score: 226.5 |
e-value: 1.8e-59 |
Identity: 46.89% |
Span: 903bp (83.5%) |
Frame: 3 |
| At3g51950.1 68410.m05281 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g21100.1 |
score: 225.7 |
e-value: 3e-59 |
Identity: 45.72% |
Span: 900bp (83.2%) |
Frame: 3 |
| At3g21100.1 68410.m02418 RNA recognition motif (RRM) - containing protein contains Pfam profile:PF00076 RNA recogniti... |
| Match: At1g51520.2 |
score: 192.2 |
e-value: 3.7e-49 |
Identity: 39.64% |
Span: 981bp (90.7%) |
Frame: 3 |
| At1g51520.2 68408.m05323 expressed protein |
| Match: At3g63450.1 |
score: 185.7 |
e-value: 3.5e-47 |
Identity: 53.03% |
Span: 594bp (54.9%) |
Frame: 3 |
| At3g63450.1 68410.m06598 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g51520.1 |
score: 178.3 |
e-value: 5.5e-45 |
Identity: 51.02% |
Span: 570bp (52.7%) |
Frame: 3 |
| At1g51520.1 68408.m05322 expressed protein |
| Match: At2g05160.1 |
score: 128.3 |
e-value: 6.5e-30 |
Identity: 57.52% |
Span: 339bp (31.3%) |
Frame: 3 |
| At2g05160.1 68409.m00486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g52980.1 |
score: 98.6 |
e-value: 5.6e-21 |
Identity: 55.43% |
Span: 276bp (25.5%) |
Frame: 3 |
| At3g52980.1 68410.m05407 RNA recognition motif (RRM) - containing protein predicted proteins, Arabidopsis thaliana |
| Match: At1g51530.1 |
score: 72.02 |
e-value: 5.6e-13 |
Identity: 27.76% |
Span: 867bp (80.1%) |
Frame: 3 |
| At1g51530.1 68408.m05324 RNA recognition motif (RRM) - containing protein |
| Match: At1g17640.1 |
score: 42.74 |
e-value: 0.00036 |
Identity: 32.35% |
Span: 192bp (17.7%) |
Frame: 3 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g13224.2 |
score: 41.97 |
e-value: 0.00062 |
Identity: 27.59% |
Span: 327bp (30.2%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At4g14300.1 |
score: 41.2 |
e-value: 0.001 |
Identity: 43.14% |
Span: 141bp (13.0%) |
Frame: 3 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g55550.2 |
score: 40.43 |
e-value: 0.002 |
Identity: 38.46% |
Span: 144bp (13.3%) |
Frame: 3 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.1 |
score: 40.43 |
e-value: 0.002 |
Identity: 38.46% |
Span: 144bp (13.3%) |
Frame: 3 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At4g26650.1 |
score: 39.28 |
e-value: 0.004 |
Identity: 38.46% |
Span: 144bp (13.3%) |
Frame: 3 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At3g13224.1 |
score: 38.51 |
e-value: 0.007 |
Identity: 33.33% |
Span: 177bp (16.4%) |
Frame: 3 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g58470.1 |
score: 35.81 |
e-value: 0.044 |
Identity: 33.33% |
Span: 186bp (17.2%) |
Frame: 3 |
| At1g58470.1 68408.m06095 RNA-binding protein identical to RNA binding protein GI:6566348 from (Arabidopsis thaliana);... |
| Match: At4g36960.1 |
score: 35.81 |
e-value: 0.044 |
Identity: 27.27% |
Span: 318bp (29.4%) |
Frame: 3 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
| Match: At4g25500.1 |
score: 35.81 |
e-value: 0.044 |
Identity: 28.03% |
Span: 351bp (32.4%) |
Frame: 3 |
| At4g25500.1 68411.m03344 arginine/serine-rich splicing factor RSp40 contains EST gb:T45156, H3766800 |
| Match: At5g04600.1 |
score: 34.65 |
e-value: 0.099 |
Identity: 21.28% |
Span: 408bp (37.7%) |
Frame: 3 |
| At5g04600.1 68412.m00427 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At4g32720.1 |
score: 34.65 |
e-value: 0.099 |
Identity: 30.17% |
Span: 336bp (31.1%) |
Frame: 3 |
| At4g32720.1 68411.m04237 RNA recognition motif (RRM) - containing protein RNA-binding protein LAH1, Saccharomyces cer... |
|
