| arabidopsis/peptide [blastx] | Showing best 36 hits recorded |
| Match: At3G61860.1 |
score: 290 |
e-value: 1e-78 |
Identity: 65.04% |
Span: 684bp (62.9%) |
Frame: 2 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At2G46610.1 |
score: 269 |
e-value: 2e-72 |
Identity: 63.4% |
Span: 684bp (62.9%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At4G25500.1 |
score: 241 |
e-value: 7e-64 |
Identity: 56.41% |
Span: 675bp (62.1%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At5G52040.2 |
score: 237 |
e-value: 1e-62 |
Identity: 57.02% |
Span: 684bp (62.9%) |
Frame: 2 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At5G52040.1 |
score: 237 |
e-value: 1e-62 |
Identity: 57.02% |
Span: 684bp (62.9%) |
Frame: 2 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At2G46610.2 |
score: 216 |
e-value: 2e-56 |
Identity: 62.19% |
Span: 582bp (53.5%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At4G25500.2 |
score: 177 |
e-value: 1e-44 |
Identity: 54.69% |
Span: 549bp (50.5%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At4G02430.2 |
score: 79.3 |
e-value: 4e-15 |
Identity: 31.71% |
Span: 534bp (49.1%) |
Frame: 2 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1071313 FORWARD |
| Match: At4G02430.1 |
score: 75.9 |
e-value: 4e-14 |
Identity: 34% |
Span: 384bp (35.3%) |
Frame: 2 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1070543 FORWARD |
| Match: At1G02840.1 |
score: 73.2 |
e-value: 3e-13 |
Identity: 29.05% |
Span: 531bp (48.9%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.2 |
score: 73.2 |
e-value: 3e-13 |
Identity: 29.05% |
Span: 531bp (48.9%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
| Match: At1G02840.3 |
score: 73.2 |
e-value: 3e-13 |
Identity: 29.05% |
Span: 531bp (48.9%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At3G49430.1 |
score: 66.6 |
e-value: 2e-11 |
Identity: 29.65% |
Span: 432bp (39.7%) |
Frame: 2 |
| Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A); RNA binding | chr3:18343653-18345814 FORWARD |
| Match: At3G53500.2 |
score: 64.3 |
e-value: 1e-10 |
Identity: 43.33% |
Span: 261bp (24.0%) |
Frame: 2 |
| Symbols: RSZ32 | RSZ32; nucleic acid binding | chr3:19845535-19847485 REVERSE |
| Match: At1G09140.2 |
score: 64.3 |
e-value: 1e-10 |
Identity: 31.52% |
Span: 441bp (40.6%) |
Frame: 2 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At1G09140.1 |
score: 64.3 |
e-value: 1e-10 |
Identity: 31.52% |
Span: 441bp (40.6%) |
Frame: 2 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At2G37340.1 |
score: 63.2 |
e-value: 3e-10 |
Identity: 44.44% |
Span: 261bp (24.0%) |
Frame: 2 |
| Symbols: ATRSZ33, RSZ33 | RSZ33 (Arginine/serine-rich Zinc knuckle-containing protein 33); nucleic acid binding / nu... |
| Match: At4G31580.1 |
score: 53.1 |
e-value: 3e-07 |
Identity: 38.46% |
Span: 264bp (24.3%) |
Frame: 2 |
| Symbols: RSZP22, SRZ-22 | SRZ-22 (serine/arginine-rich 22) | chr4:15306989-15308070 FORWARD |
| Match: At1G29400.1 |
score: 52.8 |
e-value: 4e-07 |
Identity: 26.79% |
Span: 480bp (44.2%) |
Frame: 2 |
| Symbols: AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding | chr1:10290379-10293682 REVERSE |
| Match: At1G29400.2 |
score: 52.8 |
e-value: 4e-07 |
Identity: 26.79% |
Span: 480bp (44.2%) |
Frame: 2 |
| Symbols: AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding | chr1:10290379-10293682 REVERSE |
| Match: At4G34110.1 |
score: 51.6 |
e-value: 8e-07 |
Identity: 25.41% |
Span: 501bp (46.1%) |
Frame: 2 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At2G23350.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 25.95% |
Span: 501bp (46.1%) |
Frame: 2 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At2G46610.2 |
score: 48.9 |
e-value: 5e-06 |
Identity: 35.8% |
Span: 240bp (22.1%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At1G49760.1 |
score: 48.1 |
e-value: 9e-06 |
Identity: 22.7% |
Span: 501bp (46.1%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At2G24590.1 |
score: 47.4 |
e-value: 2e-05 |
Identity: 35.87% |
Span: 267bp (24.6%) |
Frame: 2 |
| splicing factor, putative | chr2:10456916-10457939 FORWARD |
| Match: At4G25500.2 |
score: 47 |
e-value: 2e-05 |
Identity: 32.32% |
Span: 282bp (25.9%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At1G23860.1 |
score: 47 |
e-value: 2e-05 |
Identity: 32.97% |
Span: 264bp (24.3%) |
Frame: 2 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At1G23860.2 |
score: 47 |
e-value: 2e-05 |
Identity: 32.97% |
Span: 264bp (24.3%) |
Frame: 2 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At1G47490.1 |
score: 45.8 |
e-value: 4e-05 |
Identity: 25% |
Span: 537bp (49.4%) |
Frame: 2 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At1G48920.1 |
score: 45.8 |
e-value: 4e-05 |
Identity: 21.54% |
Span: 666bp (61.3%) |
Frame: 2 |
| Symbols: ATNUC-L1, PARL1 | nucleolin, putative | chr1:18101854-18105090 FORWARD |
| Match: At1G43190.1 |
score: 45.4 |
e-value: 6e-05 |
Identity: 24.86% |
Span: 480bp (44.2%) |
Frame: 2 |
| polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative | chr1:16277872-1... |
| Match: At4G12640.1 |
score: 45.4 |
e-value: 6e-05 |
Identity: 26.74% |
Span: 435bp (40.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:7462694-7467627 FORWARD |
| Match: At3G14100.1 |
score: 45.1 |
e-value: 8e-05 |
Identity: 24.74% |
Span: 525bp (48.3%) |
Frame: 2 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At2G33410.1 |
score: 45.1 |
e-value: 8e-05 |
Identity: 24.29% |
Span: 675bp (62.1%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr2:14163161-14164511 FORWARD |
| Match: At3G18610.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 23.53% |
Span: 396bp (36.4%) |
Frame: 2 |
| Symbols: ATRANGAP1 | ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding | chr3:6404276-6407828 REVERSE |
| Match: At5G50250.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 25.57% |
Span: 480bp (44.2%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
|
| 77 lower scoring hits censored -- only 36 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|6899884|emb|CAB71893.1| |
score: 290 |
e-value: 1e-76 |
Identity: 65.04% |
Span: 684bp (62.9%) |
Frame: 2 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 290 |
e-value: 1e-76 |
Identity: 65.04% |
Span: 684bp (62.9%) |
Frame: 2 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|1707366|emb|CAA67798.1| |
score: 288 |
e-value: 2e-76 |
Identity: 64.63% |
Span: 684bp (62.9%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|50921405|ref|XP_471063.1| |
score: 274 |
e-value: 4e-72 |
Identity: 64.04% |
Span: 672bp (61.8%) |
Frame: 2 |
| gi|50921405|ref|XP_471063.1| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] >gi|38344865|emb|CAE01291.2| OS... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 269 |
e-value: 2e-70 |
Identity: 63.4% |
Span: 684bp (62.9%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|47680295|gb|AAT37131.1| |
score: 259 |
e-value: 1e-67 |
Identity: 61.33% |
Span: 675bp (62.1%) |
Frame: 2 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 256 |
e-value: 1e-66 |
Identity: 60.09% |
Span: 669bp (61.5%) |
Frame: 2 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|41323931|gb|AAS00039.1| |
score: 249 |
e-value: 1e-64 |
Identity: 58.44% |
Span: 684bp (62.9%) |
Frame: 2 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 241 |
e-value: 5e-62 |
Identity: 56.41% |
Span: 675bp (62.1%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|1667582|gb|AAB18813.1| |
score: 239 |
e-value: 2e-61 |
Identity: 56.41% |
Span: 675bp (62.1%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|7269400|emb|CAB81360.1| |
score: 239 |
e-value: 2e-61 |
Identity: 56.22% |
Span: 672bp (61.8%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 237 |
e-value: 8e-61 |
Identity: 57.02% |
Span: 684bp (62.9%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 237 |
e-value: 8e-61 |
Identity: 57.02% |
Span: 684bp (62.9%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|1707370|emb|CAA67799.1| |
score: 236 |
e-value: 2e-60 |
Identity: 56.6% |
Span: 684bp (62.9%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|47680309|gb|AAT37138.1| |
score: 234 |
e-value: 4e-60 |
Identity: 62.09% |
Span: 546bp (50.2%) |
Frame: 2 |
| gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays] >gi|47680375|gb|AAT37129.1| ar... |
| Match: gi|50904881|ref|XP_463929.1| |
score: 233 |
e-value: 1e-59 |
Identity: 56.03% |
Span: 684bp (62.9%) |
Frame: 2 |
| gi|50904881|ref|XP_463929.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa (japonica cultivar-gro... |
| Match: gi|42571257|ref|NP_973702.1| |
score: 216 |
e-value: 2e-54 |
Identity: 62.19% |
Span: 582bp (53.5%) |
Frame: 2 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
| Match: gi|42573039|ref|NP_974616.1| |
score: 177 |
e-value: 1e-42 |
Identity: 54.69% |
Span: 549bp (50.5%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|6759507|emb|CAB69816.1| |
score: 176 |
e-value: 2e-42 |
Identity: 75.44% |
Span: 339bp (31.2%) |
Frame: 2 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|50939903|ref|XP_479479.1| |
score: 88.2 |
e-value: 6e-16 |
Identity: 32.08% |
Span: 672bp (61.8%) |
Frame: 2 |
| gi|50939903|ref|XP_479479.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] >gi|33146... |
| Match: gi|55792397|gb|AAV65309.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 32.95% |
Span: 465bp (42.8%) |
Frame: 2 |
| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|39582979|emb|CAE73044.1| |
score: 84.3 |
e-value: 9e-15 |
Identity: 34.34% |
Span: 429bp (39.5%) |
Frame: 2 |
| gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae] |
| Match: gi|25150290|ref|NP_499649.2| |
score: 84 |
e-value: 1e-14 |
Identity: 33.14% |
Span: 435bp (40.0%) |
Frame: 2 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|11527011|gb|AAG36874.1| |
score: 84 |
e-value: 1e-14 |
Identity: 33.14% |
Span: 435bp (40.0%) |
Frame: 2 |
| gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] |
| Match: gi|111226838|ref|XP_001134599.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 29.94% |
Span: 519bp (47.7%) |
Frame: 2 |
| RNA-binding |
| Match: gi|66820066|ref|XP_643679.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 29.94% |
Span: 519bp (47.7%) |
Frame: 2 |
| gi|66820066|ref|XP_643679.1| hypothetical protein DDB0217653 [Dictyostelium discoideum] >gi|60471815|gb|EAL69770.1| h... |
| Match: gi|68037673|gb|AAY84884.1| |
score: 82.8 |
e-value: 2e-14 |
Identity: 32.37% |
Span: 465bp (42.8%) |
Frame: 2 |
| alternative splicing regulator [Triticum aestivum] |
| Match: gi|39583259|emb|CAE60051.1| |
score: 81.6 |
e-value: 6e-14 |
Identity: 32.03% |
Span: 435bp (40.0%) |
Frame: 2 |
| gi|39583259|emb|CAE60051.1| Hypothetical protein CBG03563 [Caenorhabditis briggsae] |
| Match: gi|30679143|ref|NP_567235.3| |
score: 79.3 |
e-value: 3e-13 |
Identity: 31.71% |
Span: 534bp (49.1%) |
Frame: 2 |
| gi|30679143|ref|NP_567235.3| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] |
| Match: gi|109477369|ref|XP_001064569.1| |
score: 77.8 |
e-value: 8e-13 |
Identity: 28.45% |
Span: 675bp (62.1%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|52140005|gb|AAU29328.1| |
score: 77.4 |
e-value: 1e-12 |
Identity: 29.96% |
Span: 633bp (58.2%) |
Frame: 2 |
| gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays] |
| Match: gi|52140006|gb|AAU29329.1| |
score: 77.4 |
e-value: 1e-12 |
Identity: 29.96% |
Span: 633bp (58.2%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] |
| Match: gi|56388745|gb|AAH87684.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 30.32% |
Span: 537bp (49.4%) |
Frame: 2 |
| Splicing |
| Match: gi|72032169|ref|XP_798746.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 29.21% |
Span: 429bp (39.5%) |
Frame: 2 |
| gi|72032169|ref|XP_798746.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 [Strongylocentrotus purpur... |
| Match: gi|109477377|ref|XP_001064238.1| |
score: 75.9 |
e-value: 3e-12 |
Identity: 27.49% |
Span: 675bp (62.1%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|7269003|emb|CAB80736.1| |
score: 75.9 |
e-value: 3e-12 |
Identity: 34% |
Span: 384bp (35.3%) |
Frame: 2 |
| gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana] >gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana] |
| Match: gi|30679138|ref|NP_849537.1| |
score: 75.9 |
e-value: 3e-12 |
Identity: 34% |
Span: 384bp (35.3%) |
Frame: 2 |
| gi|30679138|ref|NP_849537.1| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] gi|26451... |
| Match: gi|57105666|ref|XP_534706.1| |
score: 75.9 |
e-value: 3e-12 |
Identity: 32.48% |
Span: 435bp (40.0%) |
Frame: 2 |
| gi|57105666|ref|XP_534706.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 9 (Pre-mRNA splicing factor ... |
| Match: gi|55731147|emb|CAH92288.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 30.37% |
Span: 525bp (48.3%) |
Frame: 2 |
| gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo pygmaeus] >gi|68724975|sp|Q5R7H2|SFRS1_PONPY Splicing factor,... |
| Match: gi|5902076|ref|NP_008855.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 30.37% |
Span: 525bp (48.3%) |
Frame: 2 |
| gi|5902076|ref|NP_008855.1| splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) [H... |
| Match: gi|109114623|ref|XP_001103473.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 30.37% |
Span: 525bp (48.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|60811245|gb|AAX36166.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 30.37% |
Span: 525bp (48.3%) |
Frame: 2 |
| gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct] |
| Match: gi|76642711|ref|XP_872793.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 30.37% |
Span: 525bp (48.3%) |
Frame: 2 |
| gi|76642711|ref|XP_872793.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (ASF/SF2) [Bos taurus] >gi... |
| Match: gi|4506903|ref|NP_003760.1| |
score: 75.1 |
e-value: 5e-12 |
Identity: 32.48% |
Span: 435bp (40.0%) |
Frame: 2 |
| gi|4506903|ref|NP_003760.1| splicing factor, arginine/serine-rich 9 [Homo sapiens] gi|3929377|sp|Q13242|SFR9_HUMAN Sp... |
| Match: gi|76611179|ref|XP_881946.1| |
score: 74.7 |
e-value: 7e-12 |
Identity: 27.31% |
Span: 672bp (61.8%) |
Frame: 2 |
| gi|76611179|ref|XP_881946.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 10 [Bos taurus] |
| Match: gi|28461393|gb|AAH46895.1| |
score: 74.7 |
e-value: 7e-12 |
Identity: 30.12% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|28461393|gb|AAH46895.1| Similar to splicing factor, arginine/serine-rich 4 (SRp75) [Danio rerio] |
| Match: gi|109000268|ref|XP_001113510.1| |
score: 74.7 |
e-value: 7e-12 |
Identity: 27.31% |
Span: 672bp (61.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|52140009|gb|AAU29331.1| |
score: 74.3 |
e-value: 9e-12 |
Identity: 30.13% |
Span: 663bp (61.0%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays] |
| Match: gi|109477373|ref|XP_001064296.1| |
score: 74.3 |
e-value: 9e-12 |
Identity: 27.64% |
Span: 675bp (62.1%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76611175|ref|XP_881828.1| |
score: 74.3 |
e-value: 9e-12 |
Identity: 27.31% |
Span: 672bp (61.8%) |
Frame: 2 |
| gi|76611175|ref|XP_881828.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 8 [Bos taurus] |
| Match: gi|307438|gb|AAA36649.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|307438|gb|AAA36649.1| pre-mRNA splicing factor |
| Match: gi|62898449|dbj|BAD97164.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens] |
| Match: gi|109000265|ref|XP_001113540.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|53127294|emb|CAG31030.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 29.84% |
Span: 525bp (48.3%) |
Frame: 2 |
| gi|53127294|emb|CAG31030.1| hypothetical protein [Gallus gallus] |
| Match: gi|30585347|gb|AAP36946.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic construct] |
| Match: gi|2914669|gb|AAC04476.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens] |
| Match: gi|76611163|ref|XP_881474.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|76611163|ref|XP_881474.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 3 [Bos taurus] |
| Match: gi|109477367|ref|XP_001064632.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76611169|ref|XP_870728.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|76611169|ref|XP_870728.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 1 [Bos taurus] |
| Match: gi|109477379|ref|XP_001064077.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|52140010|gb|AAU29332.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 31.61% |
Span: 465bp (42.8%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays] |
| Match: gi|18043896|gb|AAH19437.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus] >gi|20978758|sp|Q8VE97|SFRS4_MOUSE Splicing factor, arginine/... |
| Match: gi|56270156|gb|AAH87121.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 28.12% |
Span: 510bp (46.9%) |
Frame: 2 |
| Similar |
| Match: gi|76611173|ref|XP_881776.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|76611173|ref|XP_881776.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 7 [Bos taurus] |
| Match: gi|109477375|ref|XP_001064687.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76611177|ref|XP_881889.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|76611177|ref|XP_881889.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 9 [Bos taurus] |
| Match: gi|109477365|ref|XP_001064748.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|74152317|dbj|BAE33925.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus] >gi|26449170|dbj|BAC36925.1| unnamed protein produ... |
| Match: gi|109000263|ref|XP_001113369.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|21361282|ref|NP_005617.2| |
score: 73.9 |
e-value: 1e-11 |
Identity: 30.62% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|21361282|ref|NP_005617.2| splicing factor, arginine/serine-rich 4 [Homo sapiens] gi|20981726|sp|Q08170|SFR4_HUMAN ... |
| Match: gi|62087532|dbj|BAD92213.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 30.54% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens] |
| Match: gi|45708738|gb|AAH33785.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 32.48% |
Span: 426bp (39.2%) |
Frame: 2 |
| gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens] |
| Match: gi|73966554|ref|XP_853057.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 32.48% |
Span: 426bp (39.2%) |
Frame: 2 |
| gi|73966554|ref|XP_853057.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (ASF/SF2) isoform 1 [Canis... |
| Match: gi|52140007|gb|AAU29330.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 36.17% |
Span: 381bp (35.1%) |
Frame: 2 |
| gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays] |
| Match: gi|62088696|dbj|BAD92795.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 32.48% |
Span: 426bp (39.2%) |
Frame: 2 |
| gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) va... |
| Match: gi|12836310|dbj|BAB23599.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 29.94% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus] |
| Match: gi|30584231|gb|AAP36364.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 30.54% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic construct] |
| Match: gi|74228832|dbj|BAE21902.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 29.94% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus] >gi|74197209|dbj|BAE35148.1| unnamed protein produ... |
| Match: gi|26347437|dbj|BAC37367.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 32.48% |
Span: 426bp (39.2%) |
Frame: 2 |
| gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus] |
| Match: gi|76638495|ref|XP_586968.2| |
score: 73.6 |
e-value: 2e-11 |
Identity: 32.47% |
Span: 435bp (40.0%) |
Frame: 2 |
| gi|76638495|ref|XP_586968.2| PREDICTED: similar to splicing factor, arginine/serine rich 9 (predicted) isoform 1 [Bos... |
| Match: gi|20127499|ref|NP_006266.2| |
score: 73.6 |
e-value: 2e-11 |
Identity: 30.54% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|20127499|ref|NP_006266.2| arginine/serine-rich splicing factor 6; splicing factor, arginine/serine-rich, 55 kDa; p... |
| Match: gi|74226809|dbj|BAE27050.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 29.94% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus] |
| Match: gi|78369222|ref|NP_001030349.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 30.54% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|78369222|ref|NP_001030349.1| hypothetical protein LOC507828 [Bos taurus] >gi|77567850|gb|AAI07554.1| Unknown (prot... |
| Match: gi|31543689|ref|NP_080775.2| |
score: 73.6 |
e-value: 2e-11 |
Identity: 29.94% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|31543689|ref|NP_080775.2| arginine/serine-rich splicing factor 6 [Mus musculus] gi|15080592|gb|AAH12039.1| Splicin... |
| Match: gi|179074|gb|AAA35564.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 32.48% |
Span: 426bp (39.2%) |
Frame: 2 |
| gi|179074|gb|AAA35564.1| alternative |
| Match: gi|30678395|ref|NP_850934.1| |
score: 73.2 |
e-value: 2e-11 |
Identity: 29.05% |
Span: 531bp (48.9%) |
Frame: 2 |
| gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|22135918|gb|AAM9154... |
| Match: gi|30678398|ref|NP_563665.3| |
score: 73.2 |
e-value: 2e-11 |
Identity: 29.05% |
Span: 531bp (48.9%) |
Frame: 2 |
| SR1; |
| Match: gi|2443473|gb|AAB71386.1| |
score: 73.2 |
e-value: 2e-11 |
Identity: 29.05% |
Span: 531bp (48.9%) |
Frame: 2 |
| gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] |
| Match: gi|15126569|gb|AAH12217.1| |
score: 72.8 |
e-value: 3e-11 |
Identity: 31.85% |
Span: 435bp (40.0%) |
Frame: 2 |
| Splicing |
| Match: gi|47575808|ref|NP_001001248.1| |
score: 72.8 |
e-value: 3e-11 |
Identity: 31.9% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|47575808|ref|NP_001001248.1| hypothetical protein MGC76055 [Xenopus tropicalis] >gi|45872604|gb|AAH68213.1| Hypoth... |
| Match: gi|5815238|gb|AAD52612.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 28.29% |
Span: 513bp (47.2%) |
Frame: 2 |
| gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana] |
| Match: gi|5815239|gb|AAD52613.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 28.5% |
Span: 531bp (48.9%) |
Frame: 2 |
| gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana] |
| Match: gi|28436899|gb|AAH46668.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 31.29% |
Span: 438bp (40.3%) |
Frame: 2 |
| gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis] |
| Match: gi|5815237|gb|AAD52611.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 28.5% |
Span: 531bp (48.9%) |
Frame: 2 |
| gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana] |
| Match: gi|26383576|dbj|BAC25546.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 28.34% |
Span: 477bp (43.9%) |
Frame: 2 |
| gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus] |
| Match: gi|5815236|gb|AAD52610.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 28.5% |
Span: 531bp (48.9%) |
Frame: 2 |
| gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana] |
| Match: gi|74192738|dbj|BAE34886.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 31.85% |
Span: 435bp (40.0%) |
Frame: 2 |
| gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus] |
| Match: gi|5815235|gb|AAD52609.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 28.5% |
Span: 531bp (48.9%) |
Frame: 2 |
| gi|5815235|gb|AAD52609.1| splicing factor SR1 [Arabidopsis thaliana] |
| Match: gi|52140013|gb|AAU29334.1| |
score: 72 |
e-value: 4e-11 |
Identity: 30.23% |
Span: 459bp (42.2%) |
Frame: 2 |
| gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays] |
| Match: gi|52140015|gb|AAU29336.1| |
score: 72 |
e-value: 4e-11 |
Identity: 30.23% |
Span: 459bp (42.2%) |
Frame: 2 |
| gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays] |
|
| 194 lower scoring hits censored -- only 100 best hits are stored. |
