| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At4G36690.1 |
score: 62.8 |
e-value: 1e-13 |
Identity: 52.63% |
Span: 162bp (14.4%) |
Frame: 3 |
| Symbols: ATU2AF65A | ATU2AF65A; RNA binding | chr4:17294143-17297613 REVERSE |
| Match: At1G60830.1 |
score: 61.2 |
e-value: 2e-18 |
Identity: 57.45% |
Span: 141bp (12.6%) |
Frame: 3 |
| U2 snRNP auxiliary factor large subunit, putative | chr1:22398723-22399268 REVERSE |
| Match: At1G60900.1 |
score: 61.2 |
e-value: 8e-19 |
Identity: 57.45% |
Span: 141bp (12.6%) |
Frame: 3 |
| U2 snRNP auxiliary factor large subunit, putative | chr1:22427673-22431471 FORWARD |
| Match: At1G60900.1 |
score: 38.5 |
e-value: 8e-19 |
Identity: 56.25% |
Span: 96bp (8.6%) |
Frame: 1 |
| U2 snRNP auxiliary factor large subunit, putative | chr1:22427673-22431471 FORWARD |
| Match: At1G60830.1 |
score: 38.5 |
e-value: 2e-18 |
Identity: 56.25% |
Span: 96bp (8.6%) |
Frame: 1 |
| U2 snRNP auxiliary factor large subunit, putative | chr1:22398723-22399268 REVERSE |
| Match: At1G60900.1 |
score: 32 |
e-value: 8e-19 |
Identity: 54.17% |
Span: 72bp (6.4%) |
Frame: 2 |
| U2 snRNP auxiliary factor large subunit, putative | chr1:22427673-22431471 FORWARD |
| Match: At4G36690.1 |
score: 31.6 |
e-value: 1e-13 |
Identity: 54.17% |
Span: 72bp (6.4%) |
Frame: 2 |
| Symbols: ATU2AF65A | ATU2AF65A; RNA binding | chr4:17294143-17297613 REVERSE |
| Match: At1G60830.1 |
score: 30.8 |
e-value: 2e-18 |
Identity: 50% |
Span: 72bp (6.4%) |
Frame: 2 |
| U2 snRNP auxiliary factor large subunit, putative | chr1:22398723-22399268 REVERSE |
|
| 2 lower scoring hits censored -- only 8 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|3850821|emb|CAA77135.1| |
score: 65.9 |
e-value: 7e-13 |
Identity: 58.18% |
Span: 156bp (13.9%) |
Frame: 3 |
| gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|68036764|gb|AAY84880.1| |
score: 63.9 |
e-value: 6e-13 |
Identity: 63.83% |
Span: 141bp (12.6%) |
Frame: 3 |
| U2AF |
| Match: gi|15234495|ref|NP_195387.1| |
score: 62.8 |
e-value: 1e-11 |
Identity: 52.63% |
Span: 162bp (14.4%) |
Frame: 3 |
| ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi75318082|sp|O23212.2|U2A... |
| Match: gi|108864648|gb|ABG22574.1| |
score: 62.4 |
e-value: 1e-17 |
Identity: 61.7% |
Span: 141bp (12.6%) |
Frame: 3 |
| transposon protein, putative, CACTA, En/Spm sub-class, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108864649|gb|ABA95281.2| |
score: 62.4 |
e-value: 1e-17 |
Identity: 61.7% |
Span: 141bp (12.6%) |
Frame: 3 |
| transposon |
| Match: gi|92875570|gb|ABE83506.1| |
score: 62 |
e-value: 5e-08 |
Identity: 33.55% |
Span: 438bp (39.0%) |
Frame: 3 |
| RNA-binding |
| Match: gi|22655131|gb|AAM98156.1| |
score: 61.2 |
e-value: 6e-17 |
Identity: 57.45% |
Span: 141bp (12.6%) |
Frame: 3 |
| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] |
| Match: gi|30696485|ref|NP_176287.3| |
score: 61.2 |
e-value: 6e-17 |
Identity: 57.45% |
Span: 141bp (12.6%) |
Frame: 3 |
| U2 snRNP auxiliary factor large subunit, putative [Arabidopsis thaliana] >gi209572798|sp|Q8L716.2|U2A2B_ARATH RecName... |
| Match: gi|18406905|ref|NP_564764.1| |
score: 61.2 |
e-value: 2e-16 |
Identity: 57.45% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|18406905|ref|NP_564764.1| U2 snRNP auxiliary factor, large subunit, putative [Arabidopsis thaliana] gi|25404293|pi... |
| Match: gi|12323333|gb|AAG51641.1| |
score: 61.2 |
e-value: 6e-17 |
Identity: 57.45% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|12323333|gb|AAG51641.1| putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis thaliana] |
| Match: gi|3850823|emb|CAA77136.1| |
score: 60.8 |
e-value: 3e-11 |
Identity: 59.57% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|9858779|gb|AAG01126.1| |
score: 60.8 |
e-value: 2e-10 |
Identity: 57.45% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|9858779|gb|AAG01126.1| BAC19.11 [Lycopersicon esculentum] |
| Match: gi|92883121|gb|ABE86783.1| |
score: 59.3 |
e-value: 3e-10 |
Identity: 57.45% |
Span: 141bp (12.6%) |
Frame: 3 |
| U2 |
| Match: gi|108864607|gb|ABA94914.2| |
score: 53.9 |
e-value: 4e-15 |
Identity: 53.19% |
Span: 141bp (12.6%) |
Frame: 3 |
| U2 |
| Match: gi|15487635|gb|AAL00879.1| |
score: 50.4 |
e-value: 3e-08 |
Identity: 46.81% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|15487635|gb|AAL00879.1| U2af splicing factor protein 1, isoform c [Caenorhabditis elegans] |
| Match: gi|13559787|gb|AAK29990.1| |
score: 50.4 |
e-value: 4e-08 |
Identity: 46.81% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|13559787|gb|AAK29990.1| U2af splicing factor protein 1, isoform b [Caenorhabditis elegans] |
| Match: gi|13559786|gb|AAK29989.1| |
score: 50.4 |
e-value: 3e-08 |
Identity: 46.81% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|13559786|gb|AAK29989.1| U2af splicing factor protein 1, isoform a [Caenorhabditis elegans] >gi|71996475|ref|NP_001... |
| Match: gi|21245140|gb|AAM44400.1| |
score: 50.4 |
e-value: 3e-08 |
Identity: 46.81% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|21245140|gb|AAM44400.1| U2af splicing factor protein 1, isoform d [Caenorhabditis elegans] |
| Match: gi|60415989|sp|P90727|U2AF2_CAEBR |
score: 50.1 |
e-value: 3e-08 |
Identity: 46.81% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|60415989|sp|P90727|U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 snRNP ... |
| Match: gi|1710361|gb|AAB38280.1| |
score: 50.1 |
e-value: 3e-08 |
Identity: 46.81% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis briggsae] |
| Match: gi|50882018|gb|AAT85577.1| |
score: 47 |
e-value: 1e-08 |
Identity: 38.3% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|50882018|gb|AAT85577.1| U2 small nuclear ribonucleoprotein auxiliary factor large subunit [Alvinella pompejana] |
| Match: gi|54643375|gb|EAL32119.1| |
score: 46.6 |
e-value: 2e-08 |
Identity: 40.43% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|54643375|gb|EAL32119.1| GA22177-PA [Drosophila pseudoobscura] |
| Match: gi|55241859|gb|EAA08228.2| |
score: 46.6 |
e-value: 3e-08 |
Identity: 40.43% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|55241859|gb|EAA08228.2| ENSANGP00000018558 [Anopheles gambiae str. PEST] >gi|58382517|ref|XP_311994.2| ENSANGP0000... |
| Match: gi|108881728|gb|EAT45953.1| |
score: 46.6 |
e-value: 2e-08 |
Identity: 40.43% |
Span: 141bp (12.6%) |
Frame: 3 |
| splicing |
| Match: gi|17861976|gb|AAL39465.1| |
score: 46.6 |
e-value: 2e-09 |
Identity: 40.43% |
Span: 141bp (12.6%) |
Frame: 3 |
| LD03714p |
| Match: gi|66520699|ref|XP_623055.1| |
score: 46.2 |
e-value: 2e-08 |
Identity: 40.43% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|66520699|ref|XP_623055.1| PREDICTED: similar to ENSANGP00000018558 [Apis mellifera] |
| Match: gi|66520702|ref|XP_623124.1| |
score: 46.2 |
e-value: 2e-08 |
Identity: 40.43% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|66520702|ref|XP_623124.1| PREDICTED: similar to ENSANGP00000018558 [Apis mellifera] |
| Match: gi|91088649|ref|XP_974465.1| |
score: 45.4 |
e-value: 3e-08 |
Identity: 38.3% |
Span: 141bp (12.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|72062169|ref|XP_792919.1| |
score: 45.1 |
e-value: 6e-08 |
Identity: 38.3% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|72062169|ref|XP_792919.1| PREDICTED: similar to CG9998-PA [Strongylocentrotus purpuratus] |
| Match: gi|47217926|emb|CAG02209.1| |
score: 44.3 |
e-value: 2e-08 |
Identity: 40.43% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|95103122|gb|ABF51502.1| |
score: 43.9 |
e-value: 9e-08 |
Identity: 38.3% |
Span: 141bp (12.6%) |
Frame: 3 |
| U2 |
| Match: gi|71022561|ref|XP_761510.1| |
score: 42.7 |
e-value: 2e-07 |
Identity: 40% |
Span: 135bp (12.0%) |
Frame: 3 |
| gi|71022561|ref|XP_761510.1| hypothetical protein UM05363.1 [Ustilago maydis 521] >gi|46101379|gb|EAK86612.1| hypothe... |
| Match: gi|76642413|ref|XP_875104.1| |
score: 41.2 |
e-value: 7e-07 |
Identity: 36.17% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|76642413|ref|XP_875104.1| PREDICTED: similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b isoform 2... |
| Match: gi|55101|emb|CAA45874.1| |
score: 41.2 |
e-value: 7e-07 |
Identity: 36.17% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|55101|emb|CAA45874.1| splicing factor U2AF [Mus musculus] >gi|26347321|dbj|BAC37309.1| unnamed protein product [Mu... |
| Match: gi|6005926|ref|NP_009210.1| |
score: 41.2 |
e-value: 7e-07 |
Identity: 36.17% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|6005926|ref|NP_009210.1| U2 small nuclear ribonucleoprotein auxiliary factor (65kD); splicing factor U2AF 65 kD su... |
| Match: gi|228543|prf||1805352A |
score: 41.2 |
e-value: 7e-07 |
Identity: 36.17% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=large |
| Match: gi|89994093|gb|AAI14161.1| |
score: 41.2 |
e-value: 7e-07 |
Identity: 36.17% |
Span: 141bp (12.6%) |
Frame: 3 |
| LOC507895 |
| Match: gi|109461142|ref|XP_001059746.1| |
score: 41.2 |
e-value: 7e-07 |
Identity: 36.17% |
Span: 141bp (12.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|1334149|emb|CAA45875.1| |
score: 41.2 |
e-value: 7e-07 |
Identity: 36.17% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|1334149|emb|CAA45875.1| unnamed protein product [Mus musculus] >gi|110998|pir||S22646 splicing factor U2AF homolog... |
| Match: gi|76642411|ref|XP_888191.1| |
score: 41.2 |
e-value: 7e-07 |
Identity: 36.17% |
Span: 141bp (12.6%) |
Frame: 3 |
| gi|76642411|ref|XP_888191.1| PREDICTED: similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b isoform 8... |
| Match: gi|18406905|ref|NP_564764.1| |
score: 38.5 |
e-value: 2e-16 |
Identity: 56.25% |
Span: 96bp (8.6%) |
Frame: 1 |
| gi|18406905|ref|NP_564764.1| U2 snRNP auxiliary factor, large subunit, putative [Arabidopsis thaliana] gi|25404293|pi... |
| Match: gi|12323333|gb|AAG51641.1| |
score: 38.5 |
e-value: 6e-17 |
Identity: 56.25% |
Span: 96bp (8.6%) |
Frame: 1 |
| gi|12323333|gb|AAG51641.1| putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis thaliana] |
| Match: gi|22655131|gb|AAM98156.1| |
score: 38.5 |
e-value: 6e-17 |
Identity: 56.25% |
Span: 96bp (8.6%) |
Frame: 1 |
| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] |
| Match: gi|30696485|ref|NP_176287.3| |
score: 38.5 |
e-value: 6e-17 |
Identity: 56.25% |
Span: 96bp (8.6%) |
Frame: 1 |
| U2 snRNP auxiliary factor large subunit, putative [Arabidopsis thaliana] >gi209572798|sp|Q8L716.2|U2A2B_ARATH RecName... |
| Match: gi|66520702|ref|XP_623124.1| |
score: 37.4 |
e-value: 2e-08 |
Identity: 53.57% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|66520702|ref|XP_623124.1| PREDICTED: similar to ENSANGP00000018558 [Apis mellifera] |
| Match: gi|66520699|ref|XP_623055.1| |
score: 37.4 |
e-value: 2e-08 |
Identity: 53.57% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|66520699|ref|XP_623055.1| PREDICTED: similar to ENSANGP00000018558 [Apis mellifera] |
| Match: gi|50882018|gb|AAT85577.1| |
score: 37 |
e-value: 1e-08 |
Identity: 53.57% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|50882018|gb|AAT85577.1| U2 small nuclear ribonucleoprotein auxiliary factor large subunit [Alvinella pompejana] |
| Match: gi|47217926|emb|CAG02209.1| |
score: 37 |
e-value: 2e-08 |
Identity: 53.57% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|108881728|gb|EAT45953.1| |
score: 37 |
e-value: 2e-08 |
Identity: 57.14% |
Span: 84bp (7.5%) |
Frame: 2 |
| splicing |
| Match: gi|91088649|ref|XP_974465.1| |
score: 37 |
e-value: 3e-08 |
Identity: 57.14% |
Span: 84bp (7.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|54643375|gb|EAL32119.1| |
score: 37 |
e-value: 2e-08 |
Identity: 57.14% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|54643375|gb|EAL32119.1| GA22177-PA [Drosophila pseudoobscura] |
| Match: gi|17861976|gb|AAL39465.1| |
score: 37 |
e-value: 2e-09 |
Identity: 57.14% |
Span: 84bp (7.5%) |
Frame: 2 |
| LD03714p |
| Match: gi|95103122|gb|ABF51502.1| |
score: 37 |
e-value: 9e-08 |
Identity: 57.14% |
Span: 84bp (7.5%) |
Frame: 2 |
| U2 |
| Match: gi|72062169|ref|XP_792919.1| |
score: 36.6 |
e-value: 6e-08 |
Identity: 46.67% |
Span: 90bp (8.0%) |
Frame: 2 |
| gi|72062169|ref|XP_792919.1| PREDICTED: similar to CG9998-PA [Strongylocentrotus purpuratus] |
| Match: gi|55241859|gb|EAA08228.2| |
score: 35.8 |
e-value: 3e-08 |
Identity: 53.57% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|55241859|gb|EAA08228.2| ENSANGP00000018558 [Anopheles gambiae str. PEST] >gi|58382517|ref|XP_311994.2| ENSANGP0000... |
| Match: gi|108864607|gb|ABA94914.2| |
score: 35.8 |
e-value: 4e-15 |
Identity: 51.61% |
Span: 93bp (8.3%) |
Frame: 1 |
| U2 |
| Match: gi|76642411|ref|XP_888191.1| |
score: 35.4 |
e-value: 7e-07 |
Identity: 50% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|76642411|ref|XP_888191.1| PREDICTED: similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b isoform 8... |
| Match: gi|109461142|ref|XP_001059746.1| |
score: 35.4 |
e-value: 7e-07 |
Identity: 50% |
Span: 84bp (7.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|6005926|ref|NP_009210.1| |
score: 35.4 |
e-value: 7e-07 |
Identity: 50% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|6005926|ref|NP_009210.1| U2 small nuclear ribonucleoprotein auxiliary factor (65kD); splicing factor U2AF 65 kD su... |
| Match: gi|89994093|gb|AAI14161.1| |
score: 35.4 |
e-value: 7e-07 |
Identity: 50% |
Span: 84bp (7.5%) |
Frame: 2 |
| LOC507895 |
| Match: gi|76642413|ref|XP_875104.1| |
score: 35.4 |
e-value: 7e-07 |
Identity: 50% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|76642413|ref|XP_875104.1| PREDICTED: similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b isoform 2... |
| Match: gi|1334149|emb|CAA45875.1| |
score: 35.4 |
e-value: 7e-07 |
Identity: 50% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|1334149|emb|CAA45875.1| unnamed protein product [Mus musculus] >gi|110998|pir||S22646 splicing factor U2AF homolog... |
| Match: gi|228543|prf||1805352A |
score: 35.4 |
e-value: 7e-07 |
Identity: 50% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=large |
| Match: gi|68036764|gb|AAY84880.1| |
score: 34.7 |
e-value: 6e-13 |
Identity: 60% |
Span: 75bp (6.7%) |
Frame: 2 |
| U2AF |
| Match: gi|108864607|gb|ABA94914.2| |
score: 34.3 |
e-value: 4e-15 |
Identity: 54.17% |
Span: 72bp (6.4%) |
Frame: 2 |
| U2 |
| Match: gi|108864649|gb|ABA95281.2| |
score: 33.5 |
e-value: 1e-17 |
Identity: 55.56% |
Span: 81bp (7.2%) |
Frame: 1 |
| transposon |
| Match: gi|71022561|ref|XP_761510.1| |
score: 33.5 |
e-value: 2e-07 |
Identity: 50% |
Span: 78bp (7.0%) |
Frame: 2 |
| gi|71022561|ref|XP_761510.1| hypothetical protein UM05363.1 [Ustilago maydis 521] >gi|46101379|gb|EAK86612.1| hypothe... |
| Match: gi|108864648|gb|ABG22574.1| |
score: 33.5 |
e-value: 1e-17 |
Identity: 55.56% |
Span: 81bp (7.2%) |
Frame: 1 |
| transposon protein, putative, CACTA, En/Spm sub-class, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108864649|gb|ABA95281.2| |
score: 33.1 |
e-value: 1e-17 |
Identity: 56% |
Span: 75bp (6.7%) |
Frame: 2 |
| transposon |
| Match: gi|108864648|gb|ABG22574.1| |
score: 33.1 |
e-value: 1e-17 |
Identity: 56% |
Span: 75bp (6.7%) |
Frame: 2 |
| transposon protein, putative, CACTA, En/Spm sub-class, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|60415989|sp|P90727|U2AF2_CAEBR |
score: 32.7 |
e-value: 3e-08 |
Identity: 42.42% |
Span: 99bp (8.8%) |
Frame: 2 |
| gi|60415989|sp|P90727|U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 snRNP ... |
| Match: gi|1710361|gb|AAB38280.1| |
score: 32.7 |
e-value: 3e-08 |
Identity: 42.42% |
Span: 99bp (8.8%) |
Frame: 2 |
| gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis briggsae] |
| Match: gi|3850821|emb|CAA77135.1| |
score: 32.3 |
e-value: 7e-13 |
Identity: 50% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|13559787|gb|AAK29990.1| |
score: 32 |
e-value: 4e-08 |
Identity: 45.45% |
Span: 99bp (8.8%) |
Frame: 2 |
| gi|13559787|gb|AAK29990.1| U2af splicing factor protein 1, isoform b [Caenorhabditis elegans] |
| Match: gi|21245140|gb|AAM44400.1| |
score: 32 |
e-value: 3e-08 |
Identity: 45.45% |
Span: 99bp (8.8%) |
Frame: 2 |
| gi|21245140|gb|AAM44400.1| U2af splicing factor protein 1, isoform d [Caenorhabditis elegans] |
| Match: gi|3850823|emb|CAA77136.1| |
score: 32 |
e-value: 3e-11 |
Identity: 46.67% |
Span: 90bp (8.0%) |
Frame: 2 |
| gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|30696485|ref|NP_176287.3| |
score: 32 |
e-value: 6e-17 |
Identity: 54.17% |
Span: 72bp (6.4%) |
Frame: 2 |
| U2 snRNP auxiliary factor large subunit, putative [Arabidopsis thaliana] >gi209572798|sp|Q8L716.2|U2A2B_ARATH RecName... |
| Match: gi|15487635|gb|AAL00879.1| |
score: 32 |
e-value: 3e-08 |
Identity: 45.45% |
Span: 99bp (8.8%) |
Frame: 2 |
| gi|15487635|gb|AAL00879.1| U2af splicing factor protein 1, isoform c [Caenorhabditis elegans] |
| Match: gi|13559786|gb|AAK29989.1| |
score: 32 |
e-value: 3e-08 |
Identity: 45.45% |
Span: 99bp (8.8%) |
Frame: 2 |
| gi|13559786|gb|AAK29989.1| U2af splicing factor protein 1, isoform a [Caenorhabditis elegans] >gi|71996475|ref|NP_001... |
| Match: gi|22655131|gb|AAM98156.1| |
score: 32 |
e-value: 6e-17 |
Identity: 54.17% |
Span: 72bp (6.4%) |
Frame: 2 |
| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] |
| Match: gi|12323333|gb|AAG51641.1| |
score: 32 |
e-value: 6e-17 |
Identity: 54.17% |
Span: 72bp (6.4%) |
Frame: 2 |
| gi|12323333|gb|AAG51641.1| putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis thaliana] |
| Match: gi|15234495|ref|NP_195387.1| |
score: 31.6 |
e-value: 1e-11 |
Identity: 54.17% |
Span: 72bp (6.4%) |
Frame: 2 |
| ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi75318082|sp|O23212.2|U2A... |
| Match: gi|18406905|ref|NP_564764.1| |
score: 30.8 |
e-value: 2e-16 |
Identity: 50% |
Span: 72bp (6.4%) |
Frame: 2 |
| gi|18406905|ref|NP_564764.1| U2 snRNP auxiliary factor, large subunit, putative [Arabidopsis thaliana] gi|25404293|pi... |
| Match: gi|92883121|gb|ABE86783.1| |
score: 30 |
e-value: 3e-10 |
Identity: 45.45% |
Span: 66bp (5.9%) |
Frame: 2 |
| U2 |
| Match: gi|9858779|gb|AAG01126.1| |
score: 29.3 |
e-value: 2e-10 |
Identity: 46.43% |
Span: 84bp (7.5%) |
Frame: 2 |
| gi|9858779|gb|AAG01126.1| BAC19.11 [Lycopersicon esculentum] |
| Match: gi|108864649|gb|ABA95281.2| |
score: 22.7 |
e-value: 1e-17 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 1 |
| transposon |
| Match: gi|108864648|gb|ABG22574.1| |
score: 22.7 |
e-value: 1e-17 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 1 |
| transposon protein, putative, CACTA, En/Spm sub-class, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|17861976|gb|AAL39465.1| |
score: 22.7 |
e-value: 2e-09 |
Identity: 47.83% |
Span: 69bp (6.1%) |
Frame: 3 |
| LD03714p |
| Match: gi|71022561|ref|XP_761510.1| |
score: 22.3 |
e-value: 2e-07 |
Identity: 50% |
Span: 54bp (4.8%) |
Frame: 1 |
| gi|71022561|ref|XP_761510.1| hypothetical protein UM05363.1 [Ustilago maydis 521] >gi|46101379|gb|EAK86612.1| hypothe... |
| Match: gi|47217926|emb|CAG02209.1| |
score: 21.2 |
e-value: 2e-08 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 3 |
| gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|108864607|gb|ABA94914.2| |
score: 20.8 |
e-value: 4e-15 |
Identity: 77.78% |
Span: 27bp (2.4%) |
Frame: 3 |
| U2 |
| Match: gi|108864648|gb|ABG22574.1| |
score: 20.8 |
e-value: 1e-17 |
Identity: 77.78% |
Span: 27bp (2.4%) |
Frame: 3 |
| transposon protein, putative, CACTA, En/Spm sub-class, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108864649|gb|ABA95281.2| |
score: 20.8 |
e-value: 1e-17 |
Identity: 77.78% |
Span: 27bp (2.4%) |
Frame: 3 |
| transposon |
| Match: gi|109461142|ref|XP_001059746.1| |
score: 20.4 |
e-value: 7e-07 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|89994093|gb|AAI14161.1| |
score: 20.4 |
e-value: 7e-07 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 3 |
| LOC507895 |
| Match: gi|1334149|emb|CAA45875.1| |
score: 20.4 |
e-value: 7e-07 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 3 |
| gi|1334149|emb|CAA45875.1| unnamed protein product [Mus musculus] >gi|110998|pir||S22646 splicing factor U2AF homolog... |
| Match: gi|6005926|ref|NP_009210.1| |
score: 20.4 |
e-value: 7e-07 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 3 |
| gi|6005926|ref|NP_009210.1| U2 small nuclear ribonucleoprotein auxiliary factor (65kD); splicing factor U2AF 65 kD su... |
| Match: gi|76642413|ref|XP_875104.1| |
score: 20.4 |
e-value: 7e-07 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 3 |
| gi|76642413|ref|XP_875104.1| PREDICTED: similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b isoform 2... |
| Match: gi|228543|prf||1805352A |
score: 20.4 |
e-value: 7e-07 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 3 |
| gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=large |
| Match: gi|76642411|ref|XP_888191.1| |
score: 20.4 |
e-value: 7e-07 |
Identity: 39.13% |
Span: 69bp (6.1%) |
Frame: 3 |
| gi|76642411|ref|XP_888191.1| PREDICTED: similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b isoform 8... |
|
| 131 lower scoring hits censored -- only 100 best hits are stored. |
