| genbank/nr [blastx] | Showing best 49 hits recorded |
| Match: gi|147791391|emb|CAN59784.1| |
score: 125 |
e-value: 5e-27 |
Identity: 49.62% |
Span: 744bp (65.3%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|115443871|ref|NP_001045715.1| |
score: 122 |
e-value: 6e-26 |
Identity: 47.1% |
Span: 750bp (65.8%) |
Frame: 3 |
| Os02g0121100 [Oryza sativa (japonica cultivar-group)] >gi41052630|dbj|BAD08139.1| putative Glycine-rich protein 2 [Or... |
| Match: gi|194705650|gb|ACF86909.1| |
score: 120 |
e-value: 2e-25 |
Identity: 45.99% |
Span: 750bp (65.8%) |
Frame: 3 |
| unknown |
| Match: gi|2708747|gb|AAD03571.1| |
score: 118 |
e-value: 1e-24 |
Identity: 42.54% |
Span: 759bp (66.6%) |
Frame: 3 |
| putative |
| Match: gi|18398546|ref|NP_565427.1| |
score: 118 |
e-value: 8e-25 |
Identity: 42.55% |
Span: 771bp (67.6%) |
Frame: 3 |
| cold-shock DNA-binding family protein [Arabidopsis thaliana] >gi14334920|gb|AAK59638.1| putative glycine-rich, zinc-f... |
| Match: gi|15233440|ref|NP_195326.1| |
score: 112 |
e-value: 5e-23 |
Identity: 44.65% |
Span: 750bp (65.8%) |
Frame: 3 |
| CSDP1 (cold shock domain protein 1); RNA binding / double-stranded DNA binding / nucleic acid binding / single-strand... |
| Match: gi|194699220|gb|ACF83694.1| |
score: 100 |
e-value: 3e-19 |
Identity: 49.63% |
Span: 387bp (33.9%) |
Frame: 3 |
| unknown |
| Match: gi|76577745|gb|ABA54143.1| |
score: 99 |
e-value: 7e-19 |
Identity: 41.08% |
Span: 552bp (48.4%) |
Frame: 3 |
| putative glycine-rich protein [Picea glauca] |
| Match: gi|157354859|emb|CAO48205.1| |
score: 99 |
e-value: 7e-19 |
Identity: 45.31% |
Span: 381bp (33.4%) |
Frame: 3 |
| unnamed |
| Match: gi|157335987|emb|CAO61817.1| |
score: 97.4 |
e-value: 2e-18 |
Identity: 48.09% |
Span: 390bp (34.2%) |
Frame: 3 |
| unnamed |
| Match: gi|147812546|emb|CAN68380.1| |
score: 95.1 |
e-value: 1e-17 |
Identity: 44.93% |
Span: 390bp (34.2%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|218189944|gb|EEC72371.1| |
score: 94.4 |
e-value: 2e-17 |
Identity: 61.64% |
Span: 216bp (18.9%) |
Frame: 3 |
| hypothetical protein OsI_05633 [Oryza sativa Indica Group] |
| Match: gi|147856673|emb|CAN81359.1| |
score: 93.2 |
e-value: 4e-17 |
Identity: 59.46% |
Span: 219bp (19.2%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157340552|emb|CAO47357.1| |
score: 92.8 |
e-value: 5e-17 |
Identity: 60.27% |
Span: 216bp (18.9%) |
Frame: 3 |
| unnamed |
| Match: gi|121631|sp|P27484|GRP2_NICSY |
score: 91.7 |
e-value: 1e-16 |
Identity: 61.54% |
Span: 228bp (20.0%) |
Frame: 3 |
| gi|121631|sp|P27484|GRP2_NICSY Glycine-rich protein 2 gi|72323|pir||KNNT2S glycine-rich protein 2 - wood tobacco gi|1... |
| Match: gi|195638850|gb|ACG38893.1| |
score: 91.3 |
e-value: 1e-16 |
Identity: 60% |
Span: 222bp (19.5%) |
Frame: 3 |
| glycine-rich |
| Match: gi|195609518|gb|ACG26589.1| |
score: 91.3 |
e-value: 1e-16 |
Identity: 60% |
Span: 222bp (19.5%) |
Frame: 3 |
| glycine-rich protein 2b [Zea mays] |
| Match: gi|195648068|gb|ACG43502.1| |
score: 90.1 |
e-value: 3e-16 |
Identity: 60% |
Span: 222bp (19.5%) |
Frame: 3 |
| glycine-rich protein 2b [Zea mays] |
| Match: gi|15234010|ref|NP_195580.1| |
score: 90.1 |
e-value: 3e-16 |
Identity: 45.19% |
Span: 381bp (33.4%) |
Frame: 3 |
| GRP2 (GLYCINE RICH PROTEIN 2); double-stranded DNA binding / mRNA binding / nucleic acid binding / single-stranded DN... |
| Match: gi|116781927|gb|ABK22299.1| |
score: 87 |
e-value: 3e-15 |
Identity: 59.15% |
Span: 210bp (18.4%) |
Frame: 3 |
| unknown |
| Match: gi|148234211|ref|NP_001091131.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 54.79% |
Span: 213bp (18.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|115474635|ref|NP_001060914.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 56% |
Span: 222bp (19.5%) |
Frame: 3 |
| Os08g0129200 |
| Match: gi|125560025|gb|EAZ05473.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 56% |
Span: 222bp (19.5%) |
Frame: 3 |
| hypothetical protein OsI_27689 [Oryza sativa Indica Group] |
| Match: gi|15226451|ref|NP_179702.1| |
score: 84 |
e-value: 2e-14 |
Identity: 42.05% |
Span: 552bp (48.4%) |
Frame: 3 |
| ATGRP2B (GLYCINE-RICH PROTEIN 2B); DNA binding / nucleic acid binding / zinc ion binding [Arabidopsis thaliana] >gi17... |
| Match: gi|42391858|dbj|BAD08701.1| |
score: 82 |
e-value: 9e-14 |
Identity: 58.9% |
Span: 216bp (18.9%) |
Frame: 3 |
| gi|42391858|dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum] |
| Match: gi|21322752|dbj|BAB78536.2| |
score: 82 |
e-value: 9e-14 |
Identity: 58.9% |
Span: 216bp (18.9%) |
Frame: 3 |
| cold shock protein-1 [Triticum aestivum] |
| Match: gi|168015213|ref|XP_001760145.1| |
score: 81.6 |
e-value: 1e-13 |
Identity: 34.72% |
Span: 555bp (48.7%) |
Frame: 3 |
| predicted |
| Match: gi|40363759|dbj|BAD06324.1| |
score: 81.3 |
e-value: 1e-13 |
Identity: 57.53% |
Span: 216bp (18.9%) |
Frame: 3 |
| gi|40363759|dbj|BAD06324.1| putative glycine-rich protein [Triticum aestivum] >gi|42391853|dbj|BAD08700.1| cold shock... |
| Match: gi|125602074|gb|EAZ41399.1| |
score: 81.3 |
e-value: 1e-13 |
Identity: 55.56% |
Span: 213bp (18.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|74272681|gb|ABA01136.1| |
score: 76.3 |
e-value: 5e-12 |
Identity: 52.7% |
Span: 219bp (19.2%) |
Frame: 3 |
| putative |
| Match: gi|159476838|ref|XP_001696518.1| |
score: 76.3 |
e-value: 5e-12 |
Identity: 52.7% |
Span: 219bp (19.2%) |
Frame: 3 |
| nucleic |
| Match: gi|85001185|ref|XP_955311.1| |
score: 75.5 |
e-value: 8e-12 |
Identity: 51.43% |
Span: 210bp (18.4%) |
Frame: 3 |
| cold |
| Match: gi|66359918|ref|XP_627137.1| |
score: 75.1 |
e-value: 1e-11 |
Identity: 47.22% |
Span: 213bp (18.7%) |
Frame: 3 |
| cold |
| Match: gi|67602636|ref|XP_666494.1| |
score: 75.1 |
e-value: 1e-11 |
Identity: 47.22% |
Span: 213bp (18.7%) |
Frame: 3 |
| glycogen |
| Match: gi|125602073|gb|EAZ41398.1| |
score: 75.1 |
e-value: 1e-11 |
Identity: 56.06% |
Span: 195bp (17.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|121077603|gb|ABM47305.1| |
score: 74.7 |
e-value: 1e-11 |
Identity: 50% |
Span: 219bp (19.2%) |
Frame: 3 |
| nucleic |
| Match: gi|168031977|ref|XP_001768496.1| |
score: 74.7 |
e-value: 1e-11 |
Identity: 51.39% |
Span: 213bp (18.7%) |
Frame: 3 |
| predicted |
| Match: gi|71027909|ref|XP_763598.1| |
score: 74.3 |
e-value: 2e-11 |
Identity: 50.7% |
Span: 213bp (18.7%) |
Frame: 3 |
| cold |
| Match: gi|168022724|ref|XP_001763889.1| |
score: 73.6 |
e-value: 3e-11 |
Identity: 50% |
Span: 213bp (18.7%) |
Frame: 3 |
| predicted |
| Match: gi|193875878|gb|ACF24575.1| |
score: 73.6 |
e-value: 3e-11 |
Identity: 50.7% |
Span: 210bp (18.4%) |
Frame: 3 |
| glycine-rich |
| Match: gi|349561|gb|AAB66357.1| |
score: 72.8 |
e-value: 5e-11 |
Identity: 53.73% |
Span: 201bp (17.6%) |
Frame: 3 |
| gi|349561|gb|AAB66357.1| DNA-binding protein |
| Match: gi|157831974|pdb|1MJC|A |
score: 72.4 |
e-value: 7e-11 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| Chain |
| Match: gi|145347619|ref|XP_001418260.1| |
score: 72.4 |
e-value: 7e-11 |
Identity: 47.89% |
Span: 213bp (18.7%) |
Frame: 3 |
| predicted |
| Match: gi|161505814|ref|YP_001572926.1| |
score: 72.4 |
e-value: 7e-11 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| hypothetical |
| Match: gi|15804102|ref|NP_290141.1| |
score: 72.4 |
e-value: 7e-11 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| gi|15804102|ref|NP_290141.1| cold shock protein 7.4, transcriptional activator of hns [Escherichia coli O157:H7 EDL93... |
| Match: gi|3891780|pdb|3MEF|A |
score: 72 |
e-value: 9e-11 |
Identity: 63.46% |
Span: 156bp (13.7%) |
Frame: 3 |
| gi|3891780|pdb|3MEF|A Chain A, Major Cold-Shock Protein From Escherichia Coli Solution Nmr Structure |
| Match: gi|83814746|ref|YP_445845.1| |
score: 72 |
e-value: 9e-11 |
Identity: 55.71% |
Span: 204bp (17.9%) |
Frame: 3 |
| hypothetical |
| Match: gi|92114621|ref|YP_574549.1| |
score: 72 |
e-value: 9e-11 |
Identity: 53.23% |
Span: 186bp (16.3%) |
Frame: 3 |
| cold-shock |
| Match: gi|110834144|ref|YP_693003.1| |
score: 72 |
e-value: 9e-11 |
Identity: 53.23% |
Span: 186bp (16.3%) |
Frame: 3 |
| cold-shock |
|
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At2G17870.1 |
score: 118 |
e-value: 6e-27 |
Identity: 42.55% |
Span: 771bp (67.6%) |
Frame: 3 |
| cold-shock DNA-binding family protein | chr2:7771358-7772263 REVERSE |
| Match: At4G36020.1 |
score: 112 |
e-value: 3e-25 |
Identity: 44.65% |
Span: 750bp (65.8%) |
Frame: 3 |
| Symbols: CSDP1 | CSDP1 (COLD SHOCK DOMAIN PROTEIN 1); nucleic acid binding | chr4:17043446-17044345 REVERSE |
| Match: At4G38680.1 |
score: 90.1 |
e-value: 2e-18 |
Identity: 45.19% |
Span: 381bp (33.4%) |
Frame: 3 |
| Symbols: CSDP2, GRP2 | GRP2 (COLD SHOCK DOMAIN PROTEIN 2); nucleic acid binding | chr4:18072234-18072845 REVERSE |
| Match: At2G21060.1 |
score: 84 |
e-value: 2e-16 |
Identity: 42.05% |
Span: 552bp (48.4%) |
Frame: 3 |
| Symbols: ATGRP2B | ATGRP2B (GLYCINE-RICH PROTEIN 2B); nucleic acid binding | chr2:9044064-9044669 REVERSE |
|
| swissprot [blastx] | Showing best 9 hits recorded |
| Match: P27484 |
score: 91.7 |
e-value: 7e-18 |
Identity: 61.54% |
Span: 228bp (20.0%) |
Frame: 3 |
| Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1 |
| Match: Q38896 |
score: 84 |
e-value: 1e-15 |
Identity: 42.05% |
Span: 552bp (48.4%) |
Frame: 3 |
| Glycine-rich protein 2b OS=Arabidopsis thaliana GN=GRP2B PE=2 SV=1 |
| Match: P0A9Y4 |
score: 72.4 |
e-value: 4e-12 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| Cold shock protein cspA OS=Shigella flexneri GN=cspA PE=2 SV=2 |
| Match: P0A9Y5 |
score: 72.4 |
e-value: 4e-12 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| Cold shock protein cspA OS=Salmonella enteritidis GN=cspA PE=2 SV=2 |
| Match: P0A9Y0 |
score: 72.4 |
e-value: 4e-12 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| Cold shock protein cspA OS=Escherichia coli O6 GN=cspA PE=2 SV=2 |
| Match: P0A9Y1 |
score: 72.4 |
e-value: 4e-12 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| Cold shock protein cspA OS=Escherichia coli O157:H7 GN=cspA PE=2 SV=2 |
| Match: P0A9Y3 |
score: 72.4 |
e-value: 4e-12 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| Cold shock protein cspA OS=Salmonella typhi GN=cspA PE=2 SV=2 |
| Match: P0A9X9 |
score: 72.4 |
e-value: 4e-12 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| Cold shock protein cspA OS=Escherichia coli (strain K12) GN=cspA PE=1 SV=2 |
| Match: P0A9Y2 |
score: 72.4 |
e-value: 4e-12 |
Identity: 61.11% |
Span: 162bp (14.2%) |
Frame: 3 |
| Cold shock protein cspA OS=Salmonella typhimurium GN=cspA PE=2 SV=2 |
|
