| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At3G61620.1 |
score: 340 |
e-value: 7e-94 |
Identity: 78.57% |
Span: 711bp (61.0%) |
Frame: 1 |
| Symbols: RRP41 | RRP41 (Ribosomal RNA Processing 41); 3'-5'-exoribonuclease/ RNA binding | chr3:22812357-22813885 RE... |
| Match: At4G27490.1 |
score: 102 |
e-value: 3e-22 |
Identity: 28.63% |
Span: 714bp (61.2%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr4:13739967-13741653 FORWARD |
| Match: At3G46210.1 |
score: 78.2 |
e-value: 9e-15 |
Identity: 31.38% |
Span: 537bp (46.1%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.2 |
score: 78.2 |
e-value: 9e-15 |
Identity: 31.38% |
Span: 537bp (46.1%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.4 |
score: 78.2 |
e-value: 9e-15 |
Identity: 31.38% |
Span: 537bp (46.1%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.3 |
score: 78.2 |
e-value: 9e-15 |
Identity: 31.38% |
Span: 537bp (46.1%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G03710.1 |
score: 56.6 |
e-value: 3e-08 |
Identity: 25.32% |
Span: 651bp (55.8%) |
Frame: 1 |
| Symbols: RIF10 | RIF10 (RESISTANT TO INHIBITION WITH FSM 10); 3'-5'-exoribonuclease/ RNA binding / nucleic acid bind... |
| Match: At5G14580.1 |
score: 53.9 |
e-value: 2e-07 |
Identity: 25.94% |
Span: 654bp (56.1%) |
Frame: 1 |
| polyribonucleotide nucleotidyltransferase, putative | chr5:4697615-4703016 REVERSE |
|
| 4 lower scoring hits censored -- only 8 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15233167|ref|NP_191721.1| |
score: 340 |
e-value: 6e-92 |
Identity: 78.57% |
Span: 711bp (61.0%) |
Frame: 1 |
| RRP41; 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] >gi186511299|ref|NP_001118878.1| RRP41; 3'-5'-exorib... |
| Match: gi|50899014|ref|XP_450295.1| |
score: 277 |
e-value: 8e-73 |
Identity: 67.6% |
Span: 687bp (58.9%) |
Frame: 1 |
| gi|50899014|ref|XP_450295.1| putative ribonuclease PH [Oryza sativa (japonica cultivar-group)] >gi|47848647|dbj|BAD22... |
| Match: gi|56270437|gb|AAH87307.1| |
score: 227 |
e-value: 9e-58 |
Identity: 49.58% |
Span: 711bp (61.0%) |
Frame: 1 |
| gi|56270437|gb|AAH87307.1| LOC495942 protein [Xenopus laevis] |
| Match: gi|111598409|gb|AAH80330.1| |
score: 225 |
e-value: 3e-57 |
Identity: 50.42% |
Span: 711bp (61.0%) |
Frame: 1 |
| Unknown |
| Match: gi|37747963|gb|AAH59525.1| |
score: 222 |
e-value: 3e-56 |
Identity: 50.21% |
Span: 672bp (57.6%) |
Frame: 1 |
| gi|37747963|gb|AAH59525.1| Putative exosome complex exonuclease RRP41 [Danio rerio] |
| Match: gi|109482347|ref|XP_001071925.1| |
score: 218 |
e-value: 6e-55 |
Identity: 49.58% |
Span: 711bp (61.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|66802544|ref|XP_635144.1| |
score: 217 |
e-value: 7e-55 |
Identity: 47.33% |
Span: 723bp (62.0%) |
Frame: 1 |
| gi|66802544|ref|XP_635144.1| hypothetical protein DDB0183823 [Dictyostelium discoideum] >gi|60463463|gb|EAL61648.1| h... |
| Match: gi|29611663|ref|NP_780608.1| |
score: 217 |
e-value: 7e-55 |
Identity: 49.16% |
Span: 711bp (61.0%) |
Frame: 1 |
| gi|29611663|ref|NP_780608.1| exosome complex exonuclease RRP41 [Mus musculus] gi|21759405|sp|Q921I9|RR41_MOUSE Exosom... |
| Match: gi|33411774|emb|CAD58792.1| |
score: 216 |
e-value: 2e-54 |
Identity: 49.16% |
Span: 711bp (61.0%) |
Frame: 1 |
| gi|33411774|emb|CAD58792.1| putative exosome complex exonuclease RRP41 [Bos taurus] |
| Match: gi|9506689|ref|NP_061910.1| |
score: 216 |
e-value: 2e-54 |
Identity: 49.16% |
Span: 711bp (61.0%) |
Frame: 1 |
| gi|9506689|ref|NP_061910.1| exosome complex exonuclease RRP41; exosome component Rrp41; ribosomal RNA-processing prot... |
| Match: gi|57095694|ref|XP_539207.1| |
score: 215 |
e-value: 4e-54 |
Identity: 49.16% |
Span: 711bp (61.0%) |
Frame: 1 |
| gi|57095694|ref|XP_539207.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|81673708|gb|AAI09820.1| |
score: 214 |
e-value: 8e-54 |
Identity: 48.74% |
Span: 711bp (61.0%) |
Frame: 1 |
| Unknown |
| Match: gi|73974735|ref|XP_857497.1| |
score: 209 |
e-value: 2e-52 |
Identity: 48.52% |
Span: 711bp (61.0%) |
Frame: 1 |
| gi|73974735|ref|XP_857497.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|73974737|ref|XP_857538.1| |
score: 206 |
e-value: 2e-51 |
Identity: 48.52% |
Span: 711bp (61.0%) |
Frame: 1 |
| gi|73974737|ref|XP_857538.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|57641569|ref|YP_184047.1| |
score: 197 |
e-value: 6e-49 |
Identity: 48.46% |
Span: 681bp (58.4%) |
Frame: 1 |
| gi|57641569|ref|YP_184047.1| exosome subunit Rrp41p homolog, 3'-5' exoribonuclease [Thermococcus kodakarensis KOD1] >... |
| Match: gi|47220383|emb|CAF98482.1| |
score: 196 |
e-value: 2e-48 |
Identity: 40.79% |
Span: 690bp (59.2%) |
Frame: 1 |
| gi|47220383|emb|CAF98482.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|19886742|gb|AAM01596.1| |
score: 192 |
e-value: 2e-47 |
Identity: 48.9% |
Span: 681bp (58.4%) |
Frame: 1 |
| Predicted |
| Match: gi|18893710|gb|AAL81692.1| |
score: 192 |
e-value: 3e-47 |
Identity: 48.02% |
Span: 681bp (58.4%) |
Frame: 1 |
| ribonuclease |
| Match: gi|5458042|emb|CAB49532.1| |
score: 191 |
e-value: 4e-47 |
Identity: 47.58% |
Span: 681bp (58.4%) |
Frame: 1 |
| rph |
| Match: gi|88951594|ref|ZP_01154071.1| |
score: 191 |
e-value: 6e-47 |
Identity: 48.95% |
Span: 711bp (61.0%) |
Frame: 1 |
| Exosome |
| Match: gi|55234582|gb|EAA00375.3| |
score: 190 |
e-value: 1e-46 |
Identity: 43.15% |
Span: 720bp (61.7%) |
Frame: 1 |
| gi|55234582|gb|EAA00375.3| ENSANGP00000009222 [Anopheles gambiae str. PEST] >gi|58394012|ref|XP_320449.2| ENSANGP0000... |
| Match: gi|14591333|ref|NP_143411.1| |
score: 190 |
e-value: 1e-46 |
Identity: 46.7% |
Span: 681bp (58.4%) |
Frame: 1 |
| gi|14591333|ref|NP_143411.1| hypothetical protein PH1549 [Pyrococcus horikoshii] gi|29336584|sp|O59223|ECX1_PYRHO Pro... |
| Match: gi|91087129|ref|XP_975230.1| |
score: 190 |
e-value: 9e-47 |
Identity: 45.38% |
Span: 708bp (60.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|55234577|gb|EAA00376.2| |
score: 190 |
e-value: 1e-46 |
Identity: 43.15% |
Span: 720bp (61.7%) |
Frame: 1 |
| gi|55234577|gb|EAA00376.2| ENSANGP00000017010 [Anopheles gambiae str. PEST] >gi|58394004|ref|XP_320443.2| ENSANGP0000... |
| Match: gi|108870766|gb|EAT34991.1| |
score: 184 |
e-value: 7e-45 |
Identity: 42.08% |
Span: 720bp (61.7%) |
Frame: 1 |
| exosome |
| Match: gi|29336573|sp|O26779|ECX1_METTH |
score: 184 |
e-value: 5e-45 |
Identity: 45.91% |
Span: 660bp (56.6%) |
Frame: 1 |
| Probable |
| Match: gi|52549121|gb|AAU82970.1| |
score: 183 |
e-value: 1e-44 |
Identity: 45.98% |
Span: 672bp (57.6%) |
Frame: 1 |
| gi|52549121|gb|AAU82970.1| ribonuclease PH [uncultured archaeon GZfos24D9] |
| Match: gi|110621977|emb|CAJ37255.1| |
score: 182 |
e-value: 3e-44 |
Identity: 46.88% |
Span: 672bp (57.6%) |
Frame: 1 |
| putative |
| Match: gi|52548652|gb|AAU82501.1| |
score: 182 |
e-value: 3e-44 |
Identity: 45.98% |
Span: 672bp (57.6%) |
Frame: 1 |
| gi|52548652|gb|AAU82501.1| ribonuclease PH [uncultured archaeon GZfos18B6] |
| Match: gi|52550028|gb|AAU83877.1| |
score: 181 |
e-value: 8e-44 |
Identity: 45.98% |
Span: 672bp (57.6%) |
Frame: 1 |
| gi|52550028|gb|AAU83877.1| ribonuclease PH [uncultured archaeon GZfos34H10] |
| Match: gi|18160692|gb|AAL64027.1| |
score: 181 |
e-value: 6e-44 |
Identity: 44.68% |
Span: 705bp (60.5%) |
Frame: 1 |
| gi|18160692|gb|AAL64027.1| 3' exoribonuclease family protein [Pyrobaculum aerophilum str. IM2] >gi|18313178|ref|NP_55... |
| Match: gi|40217446|emb|CAE46379.1| |
score: 180 |
e-value: 1e-43 |
Identity: 45.09% |
Span: 672bp (57.6%) |
Frame: 1 |
| gi|40217446|emb|CAE46379.1| ribonuclease PH [uncultured archaeon] |
| Match: gi|13813903|gb|AAK41031.1| |
score: 179 |
e-value: 2e-43 |
Identity: 44.14% |
Span: 666bp (57.1%) |
Frame: 1 |
| Ribonuclease |
| Match: gi|68567073|gb|AAY80002.1| |
score: 179 |
e-value: 2e-43 |
Identity: 46.15% |
Span: 663bp (56.9%) |
Frame: 1 |
| ribonuclease |
| Match: gi|15621438|dbj|BAB65433.1| |
score: 179 |
e-value: 3e-43 |
Identity: 45.25% |
Span: 663bp (56.9%) |
Frame: 1 |
| gi|15621438|dbj|BAB65433.1| 247aa long hypothetical ribonuclease PH [Sulfolobus tokodaii str. 7] >gi|15920655|ref|NP_... |
| Match: gi|14324525|dbj|BAB59452.1| |
score: 179 |
e-value: 2e-43 |
Identity: 43.72% |
Span: 693bp (59.4%) |
Frame: 1 |
| ribonuclease |
| Match: gi|72397146|gb|AAZ71419.1| |
score: 178 |
e-value: 5e-43 |
Identity: 45.92% |
Span: 699bp (59.9%) |
Frame: 1 |
| ribonuclease |
| Match: gi|54644456|gb|EAL33197.1| |
score: 177 |
e-value: 1e-42 |
Identity: 42.42% |
Span: 678bp (58.1%) |
Frame: 1 |
| gi|54644456|gb|EAL33197.1| GA13761-PA [Drosophila pseudoobscura] |
| Match: gi|10640637|emb|CAC12415.1| |
score: 177 |
e-value: 6e-43 |
Identity: 41.49% |
Span: 723bp (62.0%) |
Frame: 1 |
| RNase |
| Match: gi|21228725|ref|NP_634647.1| |
score: 177 |
e-value: 6e-43 |
Identity: 44.21% |
Span: 699bp (59.9%) |
Frame: 1 |
| gi|21228725|ref|NP_634647.1| Ribonuclease [Methanosarcina mazei Goe1] gi|29336795|sp|Q8PTT8|ECX1_METMA Probable exoso... |
| Match: gi|52548823|gb|AAU82672.1| |
score: 177 |
e-value: 6e-43 |
Identity: 47.2% |
Span: 642bp (55.1%) |
Frame: 1 |
| gi|52548823|gb|AAU82672.1| ribonuclease PH [uncultured archaeon GZfos19A5] |
| Match: gi|52550472|gb|AAU84321.1| |
score: 175 |
e-value: 3e-42 |
Identity: 43.8% |
Span: 726bp (62.3%) |
Frame: 1 |
| gi|52550472|gb|AAU84321.1| ribonuclease PH [uncultured archaeon GZfos9D1] |
| Match: gi|72012895|ref|XP_785829.1| |
score: 174 |
e-value: 7e-42 |
Identity: 51.43% |
Span: 501bp (43.0%) |
Frame: 1 |
| PREDICTED: similar to LOC495942 protein [Strongylocentrotus purpuratus] >gi115926426|ref|XP_001179028.1| PREDICTED: s... |
| Match: gi|52549528|gb|AAU83377.1| |
score: 174 |
e-value: 9e-42 |
Identity: 45.79% |
Span: 642bp (55.1%) |
Frame: 1 |
| gi|52549528|gb|AAU83377.1| ribonuclease PH [uncultured archaeon GZfos27G5] |
| Match: gi|91772267|ref|YP_564959.1| |
score: 174 |
e-value: 5e-42 |
Identity: 44.83% |
Span: 696bp (59.7%) |
Frame: 1 |
| Exosome |
| Match: gi|73974732|ref|XP_857418.1| |
score: 172 |
e-value: 3e-41 |
Identity: 45.37% |
Span: 648bp (55.6%) |
Frame: 1 |
| gi|73974732|ref|XP_857418.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|52352385|gb|AAU43674.1| |
score: 172 |
e-value: 3e-41 |
Identity: 45.79% |
Span: 642bp (55.1%) |
Frame: 1 |
| gi|52352385|gb|AAU43674.1| ribonuclease PH [uncultured archaeon GZfos26D8] |
| Match: gi|84490039|ref|YP_448271.1| |
score: 171 |
e-value: 5e-41 |
Identity: 42.15% |
Span: 669bp (57.4%) |
Frame: 1 |
| putative |
| Match: gi|24584046|ref|NP_609618.2| |
score: 171 |
e-value: 6e-41 |
Identity: 41.56% |
Span: 678bp (58.1%) |
Frame: 1 |
| gi|24584046|ref|NP_609618.2| CG15481-PA [Drosophila melanogaster] gi|7298022|gb|AAF53263.1| CG15481-PA [Drosophila me... |
| Match: gi|48430114|gb|AAT42979.1| |
score: 169 |
e-value: 3e-40 |
Identity: 42.92% |
Span: 678bp (58.1%) |
Frame: 1 |
| gi|48430114|gb|AAT42979.1| ribonuclease PH [Picrophilus torridus DSM 9790] >gi|48477466|ref|YP_023172.1| ribonuclease... |
| Match: gi|17946442|gb|AAL49254.1| |
score: 168 |
e-value: 4e-40 |
Identity: 41.13% |
Span: 678bp (58.1%) |
Frame: 1 |
| gi|17946442|gb|AAL49254.1| RE67757p [Drosophila melanogaster] |
| Match: gi|110605657|ref|ZP_01393703.1| |
score: 167 |
e-value: 7e-40 |
Identity: 42.38% |
Span: 630bp (54.0%) |
Frame: 1 |
| Exosome |
| Match: gi|29336576|sp|O29757|ECX1_ARCFU |
score: 167 |
e-value: 7e-40 |
Identity: 44.25% |
Span: 669bp (57.4%) |
Frame: 1 |
| Probable |
| Match: gi|5105131|dbj|BAA80445.1| |
score: 160 |
e-value: 1e-37 |
Identity: 40.54% |
Span: 666bp (57.1%) |
Frame: 1 |
| 246aa |
| Match: gi|57226879|gb|AAW43339.1| |
score: 158 |
e-value: 4e-37 |
Identity: 40.91% |
Span: 726bp (62.3%) |
Frame: 1 |
| gi|57226879|gb|AAW43339.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] >gi|5025872... |
| Match: gi|68141088|gb|EAM94379.1| |
score: 158 |
e-value: 5e-37 |
Identity: 40.36% |
Span: 669bp (57.4%) |
Frame: 1 |
| gi|68141088|gb|EAM94379.1| 3' exoribonuclease [Ferroplasma acidarmanus Fer1] >gi|69268346|ref|ZP_00609129.1| 3' exori... |
| Match: gi|50550057|ref|XP_502501.1| |
score: 153 |
e-value: 2e-35 |
Identity: 40.37% |
Span: 651bp (55.8%) |
Frame: 1 |
| gi|50550057|ref|XP_502501.1| hypothetical protein [Yarrowia lipolytica] >gi|49648369|emb|CAG80689.1| unnamed protein ... |
| Match: gi|2706461|emb|CAA15919.1| |
score: 152 |
e-value: 2e-35 |
Identity: 41.41% |
Span: 681bp (58.4%) |
Frame: 1 |
| gi|2706461|emb|CAA15919.1| SPAC3G9.10c [Schizosaccharomyces pombe] >gi|19114994|ref|NP_594082.1| hypothetical protein... |
| Match: gi|1749490|dbj|BAA13803.1| |
score: 151 |
e-value: 5e-35 |
Identity: 40.97% |
Span: 681bp (58.4%) |
Frame: 1 |
| unnamed |
| Match: gi|71981632|ref|NP_001021274.1| |
score: 149 |
e-value: 2e-34 |
Identity: 38.71% |
Span: 651bp (55.8%) |
Frame: 1 |
| Transport |
| Match: gi|39587718|emb|CAE58656.1| |
score: 148 |
e-value: 5e-34 |
Identity: 38.71% |
Span: 651bp (55.8%) |
Frame: 1 |
| gi|39587718|emb|CAE58656.1| Hypothetical protein CBG01825 [Caenorhabditis briggsae] |
| Match: gi|110755743|ref|XP_395806.3| |
score: 146 |
e-value: 2e-33 |
Identity: 40.08% |
Span: 675bp (57.9%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|71018287|ref|XP_759374.1| |
score: 146 |
e-value: 2e-33 |
Identity: 39.17% |
Span: 714bp (61.2%) |
Frame: 1 |
| gi|71018287|ref|XP_759374.1| hypothetical protein UM03227.1 [Ustilago maydis 521] >gi|46099099|gb|EAK84332.1| hypothe... |
| Match: gi|49526075|emb|CAG59694.1| |
score: 145 |
e-value: 3e-33 |
Identity: 37.18% |
Span: 696bp (59.7%) |
Frame: 1 |
| unnamed |
| Match: gi|50307027|ref|XP_453491.1| |
score: 145 |
e-value: 3e-33 |
Identity: 38.56% |
Span: 696bp (59.7%) |
Frame: 1 |
| gi|50307027|ref|XP_453491.1| unnamed protein product [Kluyveromyces lactis] >gi|49642625|emb|CAH00587.1| unnamed prot... |
| Match: gi|111070860|gb|EAT91980.1| |
score: 144 |
e-value: 1e-32 |
Identity: 39.66% |
Span: 660bp (56.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|49658001|emb|CAG90837.1| |
score: 144 |
e-value: 8e-33 |
Identity: 40.38% |
Span: 636bp (54.5%) |
Frame: 1 |
| gi|49658001|emb|CAG90837.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50427437|ref|XP_462331.1| unna... |
| Match: gi|76633970|ref|XP_875715.1| |
score: 144 |
e-value: 1e-32 |
Identity: 35.02% |
Span: 711bp (61.0%) |
Frame: 1 |
| gi|76633970|ref|XP_875715.1| PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protei... |
| Match: gi|67471870|ref|XP_651847.1| |
score: 144 |
e-value: 8e-33 |
Identity: 38.43% |
Span: 684bp (58.7%) |
Frame: 1 |
| gi|67471870|ref|XP_651847.1| exosome complex exonuclease, putative [Entamoeba histolytica HM-1:IMSS] >gi|56468626|gb|... |
| Match: gi|68466049|ref|XP_722799.1| |
score: 144 |
e-value: 8e-33 |
Identity: 40.27% |
Span: 672bp (57.6%) |
Frame: 1 |
| gi|68466049|ref|XP_722799.1| putative exosome component Ski6p [Candida albicans SC5314] >gi|68466344|ref|XP_722654.1|... |
| Match: gi|6321634|ref|NP_011711.1| |
score: 143 |
e-value: 2e-32 |
Identity: 37.61% |
Span: 696bp (59.7%) |
Frame: 1 |
| gi|6321634|ref|NP_011711.1| superkiller; ExtraCellular Mutant; Ribosomal RNA Processing; Ski6p [Saccharomyces cerevis... |
| Match: gi|68065138|ref|XP_674553.1| |
score: 142 |
e-value: 3e-32 |
Identity: 34.76% |
Span: 690bp (59.2%) |
Frame: 1 |
| gi|68065138|ref|XP_674553.1| exosome complex exonuclease rrp41, putative [Plasmodium berghei] >gi|56493201|emb|CAH990... |
| Match: gi|70932569|ref|XP_737786.1| |
score: 141 |
e-value: 5e-32 |
Identity: 36.24% |
Span: 645bp (55.3%) |
Frame: 1 |
| gi|70932569|ref|XP_737786.1| exosome complex exonuclease rrp41, putative [Plasmodium chabaudi] >gi|56513462|emb|CAH83... |
| Match: gi|44981477|gb|AAS51262.1| |
score: 138 |
e-value: 4e-31 |
Identity: 37.23% |
Span: 687bp (58.9%) |
Frame: 1 |
| gi|44981477|gb|AAS51262.1| ACR035Wp [Ashbya gossypii ATCC 10895] >gi|45185722|ref|NP_983438.1| ACR035Wp [Eremothecium... |
| Match: gi|68129956|emb|CAJ09264.1| |
score: 135 |
e-value: 4e-30 |
Identity: 35.56% |
Span: 711bp (61.0%) |
Frame: 1 |
| exosome |
| Match: gi|82793240|ref|XP_727962.1| |
score: 128 |
e-value: 4e-28 |
Identity: 35.32% |
Span: 603bp (51.7%) |
Frame: 1 |
| exonuclease |
| Match: gi|72115077|ref|XP_789674.1| |
score: 128 |
e-value: 6e-28 |
Identity: 35.17% |
Span: 687bp (58.9%) |
Frame: 1 |
| gi|72115077|ref|XP_789674.1| PREDICTED: similar to homolog of yeast mRNA transport regulator 3 [Strongylocentrotus pu... |
| Match: gi|23497324|gb|AAN36869.1| |
score: 128 |
e-value: 6e-28 |
Identity: 31.65% |
Span: 702bp (60.2%) |
Frame: 1 |
| exosome |
| Match: gi|71665831|ref|XP_819881.1| |
score: 122 |
e-value: 4e-26 |
Identity: 31.25% |
Span: 714bp (61.2%) |
Frame: 1 |
| ribosomal |
| Match: gi|85112514|ref|XP_964355.1| |
score: 121 |
e-value: 7e-26 |
Identity: 35.1% |
Span: 684bp (58.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|71649471|ref|XP_813459.1| |
score: 121 |
e-value: 5e-26 |
Identity: 39.52% |
Span: 501bp (43.0%) |
Frame: 1 |
| exosome |
| Match: gi|89286453|gb|EAR84452.1| |
score: 120 |
e-value: 1e-25 |
Identity: 33.48% |
Span: 669bp (57.4%) |
Frame: 1 |
| 3' |
| Match: gi|88185561|gb|EAQ93029.1| |
score: 119 |
e-value: 3e-25 |
Identity: 33.33% |
Span: 684bp (58.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|66472734|ref|NP_001018322.1| |
score: 118 |
e-value: 6e-25 |
Identity: 31.51% |
Span: 633bp (54.3%) |
Frame: 1 |
| exosome component 6 [Danio rerio] >gi123905166|sp|Q6P0I8.2|EXOS6_DANRE RecName: Full=Exosome complex exonuclease MTR3... |
| Match: gi|71747850|ref|XP_822980.1| |
score: 117 |
e-value: 1e-24 |
Identity: 32.2% |
Span: 702bp (60.2%) |
Frame: 1 |
| exosome |
| Match: gi|14250906|emb|CAC39258.1| |
score: 117 |
e-value: 1e-24 |
Identity: 32.63% |
Span: 702bp (60.2%) |
Frame: 1 |
| gi|14250906|emb|CAC39258.1| Rrp41p homologue [Trypanosoma brucei] |
| Match: gi|39977801|ref|XP_370288.1| |
score: 116 |
e-value: 2e-24 |
Identity: 33.98% |
Span: 696bp (59.7%) |
Frame: 1 |
| gi|39977801|ref|XP_370288.1| hypothetical protein MG06785.4 [Magnaporthe grisea 70-15] |
| Match: gi|46135695|ref|XP_389539.1| |
score: 113 |
e-value: 2e-23 |
Identity: 37.44% |
Span: 624bp (53.5%) |
Frame: 1 |
| gi|46135695|ref|XP_389539.1| hypothetical protein FG09363.1 [Gibberella zeae PH-1] >gi|42553839|gb|EAA76682.1| hypoth... |
| Match: gi|70989313|ref|XP_749506.1| |
score: 111 |
e-value: 6e-23 |
Identity: 34.8% |
Span: 660bp (56.6%) |
Frame: 1 |
| exosome |
| Match: gi|66824695|ref|XP_645702.1| |
score: 111 |
e-value: 6e-23 |
Identity: 32.06% |
Span: 621bp (53.3%) |
Frame: 1 |
| hypothetical protein DDB_G0271396 [Dictyostelium discoideum AX4] >gi60473889|gb|EAL71828.1| hypothetical protein DDB_... |
| Match: gi|91087143|ref|XP_975288.1| |
score: 109 |
e-value: 2e-22 |
Identity: 39.39% |
Span: 495bp (42.5%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|67526709|ref|XP_661416.1| |
score: 108 |
e-value: 6e-22 |
Identity: 34.01% |
Span: 660bp (56.6%) |
Frame: 1 |
| gi|67526709|ref|XP_661416.1| hypothetical protein AN3812.2 [Aspergillus nidulans FGSC A4] >gi|40740830|gb|EAA60020.1|... |
| Match: gi|83772694|dbj|BAE62822.1| |
score: 107 |
e-value: 1e-21 |
Identity: 34.54% |
Span: 660bp (56.6%) |
Frame: 1 |
| unnamed |
| Match: gi|95103116|gb|ABF51499.1| |
score: 105 |
e-value: 4e-21 |
Identity: 29.11% |
Span: 618bp (53.0%) |
Frame: 1 |
| mRNA |
| Match: gi|66536793|ref|XP_623498.1| |
score: 104 |
e-value: 9e-21 |
Identity: 37.5% |
Span: 480bp (41.2%) |
Frame: 1 |
| gi|66536793|ref|XP_623498.1| PREDICTED: similar to ENSANGP00000026025 [Apis mellifera] |
| Match: gi|47210411|emb|CAF91679.1| |
score: 102 |
e-value: 3e-20 |
Identity: 30.3% |
Span: 669bp (57.4%) |
Frame: 1 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|42567185|ref|NP_194479.2| |
score: 102 |
e-value: 3e-20 |
Identity: 28.63% |
Span: 714bp (61.2%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein [Arabidopsis thaliana] >gi124300968|gb|ABN04736.1| At4g27490 [A... |
| Match: gi|40068766|gb|AAR39101.1| |
score: 100 |
e-value: 1e-19 |
Identity: 33.48% |
Span: 630bp (54.0%) |
Frame: 1 |
| gi|40068766|gb|AAR39101.1| NEQ248 [Nanoarchaeum equitans Kin4-M] >gi|41615042|ref|NP_963540.1| hypothetical protein N... |
| Match: gi|55234780|gb|EAL38841.1| |
score: 100 |
e-value: 1e-19 |
Identity: 30.08% |
Span: 684bp (58.7%) |
Frame: 1 |
| gi|55234780|gb|EAL38841.1| ENSANGP00000026025 [Anopheles gambiae str. PEST] >gi|57908889|ref|XP_552338.1| ENSANGP0000... |
| Match: gi|1749490|dbj|BAA13803.1| |
score: 21.6 |
e-value: 5e-35 |
Identity: 60% |
Span: 45bp (3.9%) |
Frame: 2 |
| unnamed |
|
| 151 lower scoring hits censored -- only 100 best hits are stored. |
