| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225468055|ref|XP_002263309.1| |
score: 196 |
e-value: 3e-48 |
Identity: 57.68% |
Span: 774bp (65.5%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|18417696|ref|NP_567861.1| |
score: 189 |
e-value: 5e-46 |
Identity: 80.67% |
Span: 450bp (38.1%) |
Frame: 3 |
| NFD1 (NUCLEAR FUSION DEFECTIVE 1); RNA binding / structural constituent of ribosome [Arabidopsis thaliana] >gi2983955... |
| Match: gi|2980773|emb|CAA18200.1| |
score: 189 |
e-value: 5e-46 |
Identity: 80.67% |
Span: 450bp (38.1%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] >gi7269995|emb|CAB79811.1| putative protein [Arabidopsis thaliana] |
| Match: gi|255556067|ref|XP_002519068.1| |
score: 186 |
e-value: 5e-45 |
Identity: 78.81% |
Span: 453bp (38.4%) |
Frame: 3 |
| 50S ribosomal protein L21, mitochondrial precursor, putative [Ricinus communis] >gi223541731|gb|EEF43279.1| 50S ribos... |
| Match: gi|212723982|ref|NP_001132778.1| |
score: 184 |
e-value: 2e-44 |
Identity: 79.31% |
Span: 435bp (36.8%) |
Frame: 3 |
| hypothetical protein LOC100194267 [Zea mays] >gi195635625|gb|ACG37281.1| 50S ribosomal protein L21 [Zea mays] |
| Match: gi|242091337|ref|XP_002441501.1| |
score: 182 |
e-value: 5e-44 |
Identity: 79.31% |
Span: 435bp (36.8%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor] >gi241946786|gb|EES19931.1| hypothetical protein SORBIDRA... |
| Match: gi|194695374|gb|ACF81771.1| |
score: 182 |
e-value: 7e-44 |
Identity: 79.31% |
Span: 435bp (36.8%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|115465385|ref|NP_001056292.1| |
score: 179 |
e-value: 7e-43 |
Identity: 53.61% |
Span: 762bp (64.5%) |
Frame: 3 |
| Os05g0557800 [Oryza sativa (japonica cultivar-group)] >gi49328019|gb|AAT58720.1| putative ribosomal protein L21 [Oryz... |
| Match: gi|226497698|ref|NP_001140704.1| |
score: 176 |
e-value: 4e-42 |
Identity: 77.24% |
Span: 435bp (36.8%) |
Frame: 3 |
| hypothetical protein LOC100272779 [Zea mays] >gi194700660|gb|ACF84414.1| unknown [Zea mays] |
| Match: gi|225468407|ref|XP_002263105.1| |
score: 156 |
e-value: 5e-36 |
Identity: 50.72% |
Span: 594bp (50.3%) |
Frame: 3 |
| PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| Match: gi|224133964|ref|XP_002321703.1| |
score: 148 |
e-value: 1e-33 |
Identity: 77.08% |
Span: 288bp (24.4%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222868699|gb|EEF05830.1| predicted protein [Populus trichocarpa] |
| Match: gi|229576588|gb|ACQ82684.1| |
score: 140 |
e-value: 2e-31 |
Identity: 79.82% |
Span: 327bp (27.7%) |
Frame: 3 |
| At4g30930-like protein [Solanum quitoense] >gi229576590|gb|ACQ82685.1| At4g30930-like protein [Solanum quitoense] >gi... |
| Match: gi|116794414|gb|ABK27135.1| |
score: 130 |
e-value: 4e-28 |
Identity: 63.01% |
Span: 438bp (37.1%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|270257017|emb|CBI23967.1| |
score: 119 |
e-value: 9e-25 |
Identity: 73.33% |
Span: 225bp (19.1%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|167997399|ref|XP_001751406.1| |
score: 106 |
e-value: 6e-21 |
Identity: 57.02% |
Span: 339bp (28.7%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162697387|gb|EDQ83723.1| predicted protein [Physcomitrella... |
| Match: gi|270257653|emb|CBI39696.1| |
score: 98.2 |
e-value: 2e-18 |
Identity: 67.16% |
Span: 201bp (17.0%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225454186|ref|XP_002272295.1| |
score: 84 |
e-value: 3e-14 |
Identity: 46.43% |
Span: 420bp (35.6%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270258312|emb|CBI40346.1| unnamed protein product [Vitis vinifera] |
| Match: gi|116000666|emb|CAL50346.1| |
score: 82.4 |
e-value: 9e-14 |
Identity: 57.94% |
Span: 321bp (27.2%) |
Frame: 3 |
| putative 50S ribosomal protein L21 (ISS) [Ostreococcus tauri] |
| Match: gi|145340978|ref|XP_001415593.1| |
score: 82 |
e-value: 1e-13 |
Identity: 57.94% |
Span: 321bp (27.2%) |
Frame: 3 |
| Plastid ribosomal protein L21 large ribosomal subunit [Ostreococcus lucimarinus CCE9901] >gi144575816|gb|ABO93885.1| ... |
| Match: gi|132776|sp|P24613.1|RK21_SPIOL |
score: 78.2 |
e-value: 2e-12 |
Identity: 55.45% |
Span: 330bp (27.9%) |
Frame: 3 |
| RecName: Full=50S ribosomal protein L21, chloroplastic; AltName: Full=CL21; AltName: Full=CS-L7; Flags: Precursor >gi... |
| Match: gi|224145182|ref|XP_002325555.1| |
score: 75.5 |
e-value: 1e-11 |
Identity: 52.78% |
Span: 324bp (27.4%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222862430|gb|EEE99936.1| predicted protein [Populus trichocarpa] |
| Match: gi|189096142|pdb|3BBO|T |
score: 75.5 |
e-value: 1e-11 |
Identity: 55.56% |
Span: 324bp (27.4%) |
Frame: 3 |
| Chain T, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome |
| Match: gi|118486114|gb|ABK94900.1| |
score: 75.5 |
e-value: 1e-11 |
Identity: 52.78% |
Span: 324bp (27.4%) |
Frame: 3 |
| unknown [Populus trichocarpa] |
| Match: gi|15219695|ref|NP_174808.1| |
score: 75.5 |
e-value: 1e-11 |
Identity: 41.13% |
Span: 423bp (35.8%) |
Frame: 3 |
| 50S ribosomal protein L21, chloroplast / CL21 (RPL21) [Arabidopsis thaliana] >gi1710424|sp|P51412.1|RK21_ARATH RecNam... |
| Match: gi|224135915|ref|XP_002327335.1| |
score: 73.2 |
e-value: 6e-11 |
Identity: 49.57% |
Span: 345bp (29.2%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222835705|gb|EEE74140.1| predicted protein [Populus trichocarpa] |
|
| 2 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At4G30930.1 |
score: 189 |
e-value: 3e-48 |
Identity: 80.67% |
Span: 450bp (38.1%) |
Frame: 3 |
| Symbols: NFD1 | NFD1 (NUCLEAR FUSION DEFECTIVE 1); structural constituent of ribosome | chr4:15050176-15051636 REVERSE |
| Match: At1G35680.1 |
score: 75.5 |
e-value: 6e-14 |
Identity: 41.13% |
Span: 423bp (35.8%) |
Frame: 3 |
| 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | chr1:13209989-13211458 FORWARD |
|
| swissprot [blastx] | Showing best 3 hits recorded |
| Match: Q8L9A0 |
score: 189 |
e-value: 3e-47 |
Identity: 80.67% |
Span: 450bp (38.1%) |
Frame: 3 |
| 50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana GN=RPL21M PE=2 SV=1 |
| Match: P24613 |
score: 78.2 |
e-value: 1e-13 |
Identity: 55.45% |
Span: 330bp (27.9%) |
Frame: 3 |
| 50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1 |
| Match: P51412 |
score: 75.5 |
e-value: 7e-13 |
Identity: 41.13% |
Span: 423bp (35.8%) |
Frame: 3 |
| 50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 SV=1 |
|
