| genbank/nr [blastx] | Showing best 33 hits recorded |
| Match: gi|6014934|sp|Q42463|DCL_SOLLC |
score: 378 |
e-value: 6e-103 |
Identity: 99.55% |
Span: 672bp (56.8%) |
Frame: 1 |
| Protein |
| Match: gi|18650724|emb|CAD12248.1| |
score: 251 |
e-value: 9e-65 |
Identity: 68.11% |
Span: 552bp (46.7%) |
Frame: 1 |
| DCL protein [Coffea arabica] |
| Match: gi|22330069|ref|NP_683398.1| |
score: 231 |
e-value: 7e-59 |
Identity: 65.03% |
Span: 540bp (45.6%) |
Frame: 1 |
| defective chloroplasts and leaves protein-related / DCL protein-related [Arabidopsis thaliana] >gi12321014|gb|AAG5063... |
| Match: gi|85683265|gb|ABC47855.1| |
score: 229 |
e-value: 4e-58 |
Identity: 81.75% |
Span: 378bp (32.0%) |
Frame: 1 |
| defective chloroplast and leaves protein [Glycine max] |
| Match: gi|79319418|ref|NP_001031151.1| |
score: 228 |
e-value: 6e-58 |
Identity: 64.48% |
Span: 540bp (45.6%) |
Frame: 1 |
| defective chloroplasts and leaves protein-related / DCL protein-related [Arabidopsis thaliana] |
| Match: gi|147773590|emb|CAN69898.1| |
score: 227 |
e-value: 2e-57 |
Identity: 80.95% |
Span: 378bp (32.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|194704934|gb|ACF86551.1| |
score: 216 |
e-value: 2e-54 |
Identity: 73.64% |
Span: 387bp (32.7%) |
Frame: 1 |
| unknown |
| Match: gi|116793751|gb|ABK26866.1| |
score: 181 |
e-value: 8e-44 |
Identity: 66.39% |
Span: 357bp (30.2%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|115448887|ref|NP_001048223.1| |
score: 181 |
e-value: 1e-43 |
Identity: 78.43% |
Span: 306bp (25.9%) |
Frame: 1 |
| Os02g0766000 [Oryza sativa (japonica cultivar-group)] >gi113537754|dbj|BAF10137.1| Os02g0766000 [Oryza sativa Japonic... |
| Match: gi|46805740|dbj|BAD17127.1| |
score: 177 |
e-value: 1e-42 |
Identity: 78% |
Span: 300bp (25.4%) |
Frame: 1 |
| DCL protein-like [Oryza sativa Japonica Group] >gi46806067|dbj|BAD17315.1| DCL protein-like [Oryza sativa Japonica Gr... |
| Match: gi|125583799|gb|EAZ24730.1| |
score: 142 |
e-value: 7e-32 |
Identity: 69.66% |
Span: 267bp (22.6%) |
Frame: 1 |
| hypothetical protein OsJ_08502 [Oryza sativa Japonica Group] |
| Match: gi|115477966|ref|NP_001062578.1| |
score: 124 |
e-value: 2e-26 |
Identity: 52.17% |
Span: 345bp (29.2%) |
Frame: 1 |
| Os09g0112400 [Oryza sativa (japonica cultivar-group)] >gi46806377|dbj|BAD17553.1| putative DCL protein [Oryza sativa ... |
| Match: gi|157335569|emb|CAO61399.1| |
score: 123 |
e-value: 3e-26 |
Identity: 45.08% |
Span: 366bp (30.9%) |
Frame: 1 |
| unnamed |
| Match: gi|15232596|ref|NP_190247.1| |
score: 121 |
e-value: 1e-25 |
Identity: 44.26% |
Span: 366bp (30.9%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] >gi6523066|emb|CAB62333.1| putative protein [Arabidopsis thaliana] >gi|2155424... |
| Match: gi|34015211|gb|AAQ56405.1| |
score: 121 |
e-value: 1e-25 |
Identity: 47.46% |
Span: 354bp (29.9%) |
Frame: 1 |
| putative defective chloroplasts and leaves (DCL) protein [Oryza sativa Japonica Group] >gi50508259|dbj|BAD32070.1| pu... |
| Match: gi|195619226|gb|ACG31443.1| |
score: 119 |
e-value: 7e-25 |
Identity: 47.37% |
Span: 342bp (28.9%) |
Frame: 1 |
| DCL |
| Match: gi|157335519|emb|CAO61349.1| |
score: 119 |
e-value: 4e-25 |
Identity: 52.67% |
Span: 384bp (32.5%) |
Frame: 1 |
| unnamed |
| Match: gi|195621682|gb|ACG32671.1| |
score: 118 |
e-value: 9e-25 |
Identity: 43.44% |
Span: 366bp (30.9%) |
Frame: 1 |
| DCL |
| Match: gi|157335520|emb|CAO61350.1| |
score: 108 |
e-value: 1e-21 |
Identity: 82.46% |
Span: 171bp (14.5%) |
Frame: 1 |
| unnamed |
| Match: gi|59939212|gb|AAX12374.1| |
score: 102 |
e-value: 5e-20 |
Identity: 40.17% |
Span: 351bp (29.7%) |
Frame: 1 |
| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea] |
| Match: gi|2088657|gb|AAB95289.1| |
score: 100 |
e-value: 2e-19 |
Identity: 40.52% |
Span: 348bp (29.4%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|79571777|ref|NP_181532.2| |
score: 100 |
e-value: 2e-19 |
Identity: 40.52% |
Span: 348bp (29.4%) |
Frame: 1 |
| NRPD1B; DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] >gi59939210|gb|AAX12373.1| DNA-directed RNA ... |
| Match: gi|68300849|gb|AAY89362.1| |
score: 100 |
e-value: 2e-19 |
Identity: 40.52% |
Span: 348bp (29.4%) |
Frame: 1 |
| RNA polymerase IV largest subunit [Arabidopsis thaliana] |
| Match: gi|157351868|emb|CAO42832.1| |
score: 100 |
e-value: 2e-19 |
Identity: 41.38% |
Span: 348bp (29.4%) |
Frame: 1 |
| unnamed |
| Match: gi|125580842|gb|EAZ21773.1| |
score: 95.1 |
e-value: 1e-17 |
Identity: 39.66% |
Span: 348bp (29.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|218190083|gb|EEC72510.1| |
score: 92 |
e-value: 9e-17 |
Identity: 38.79% |
Span: 348bp (29.4%) |
Frame: 1 |
| hypothetical protein OsI_05888 [Oryza sativa Indica Group] |
| Match: gi|57900162|dbj|BAD88247.1| |
score: 91.3 |
e-value: 2e-16 |
Identity: 41.59% |
Span: 339bp (28.7%) |
Frame: 1 |
| putative DNA-directed RNA polymerase II largest subunit [Oryza sativa Japonica Group] |
| Match: gi|125573428|gb|EAZ14943.1| |
score: 91.3 |
e-value: 2e-16 |
Identity: 41.59% |
Span: 339bp (28.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|218189797|gb|EEC72224.1| |
score: 90.9 |
e-value: 2e-16 |
Identity: 41.59% |
Span: 339bp (28.7%) |
Frame: 1 |
| hypothetical protein OsI_05331 [Oryza sativa Indica Group] |
| Match: gi|147801680|emb|CAN63470.1| |
score: 85.9 |
e-value: 6e-15 |
Identity: 42.55% |
Span: 282bp (23.8%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|168011278|ref|XP_001758330.1| |
score: 81.3 |
e-value: 2e-13 |
Identity: 42.7% |
Span: 267bp (22.6%) |
Frame: 1 |
| predicted |
| Match: gi|168000256|ref|XP_001752832.1| |
score: 79.7 |
e-value: 5e-13 |
Identity: 39.36% |
Span: 279bp (23.6%) |
Frame: 1 |
| predicted |
| Match: gi|168027477|ref|XP_001766256.1| |
score: 78.2 |
e-value: 1e-12 |
Identity: 33.59% |
Span: 393bp (33.2%) |
Frame: 1 |
| the |
|
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At1G45230.1 |
score: 231 |
e-value: 5e-61 |
Identity: 65.03% |
Span: 540bp (45.6%) |
Frame: 1 |
| defective chloroplasts and leaves protein-related / DCL protein-related | chr1:17172314-17173821 REVERSE |
| Match: At1G45230.2 |
score: 228 |
e-value: 4e-60 |
Identity: 64.48% |
Span: 540bp (45.6%) |
Frame: 1 |
| defective chloroplasts and leaves protein-related / DCL protein-related | chr1:17172314-17173821 REVERSE |
| Match: At3G46630.1 |
score: 121 |
e-value: 7e-28 |
Identity: 44.26% |
Span: 366bp (30.9%) |
Frame: 1 |
| similar to defective chloroplasts and leaves protein-related / DCL protein-related [Arabidopsis thaliana] (TAIR:AT1G... |
| Match: At2G40030.1 |
score: 100 |
e-value: 1e-21 |
Identity: 40.52% |
Span: 348bp (29.4%) |
Frame: 1 |
| Symbols: DRD3, NRPD1b | NRPD1b (nuclear RNA polymerase D 1b); DNA binding / DNA-directed RNA polymerase | chr2:16722... |
|
| swissprot [blastx] | Showing best 1 hits recorded |
| Match: Q42463 |
score: 378 |
e-value: 4e-104 |
Identity: 99.55% |
Span: 672bp (56.8%) |
Frame: 1 |
| Protein DCL, chloroplastic OS=Solanum lycopersicum GN=DCL PE=2 SV=1 |
|
