| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At4G00830.2 |
score: 147 |
e-value: 2e-35 |
Identity: 33.96% |
Span: 783bp (65.4%) |
Frame: 3 |
| RNA binding | chr4:352782-354965 FORWARD |
| Match: At4G00830.1 |
score: 147 |
e-value: 2e-35 |
Identity: 33.96% |
Span: 783bp (65.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr4:352782-354965 FORWARD |
| Match: At2G44710.1 |
score: 137 |
e-value: 1e-32 |
Identity: 30.07% |
Span: 852bp (71.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr2:18439977-18443704 FORWARD |
| Match: At3G52660.2 |
score: 119 |
e-value: 3e-27 |
Identity: 27.27% |
Span: 873bp (72.9%) |
Frame: 3 |
| RNA binding | chr3:19533576-19535713 FORWARD |
| Match: At3G52660.1 |
score: 119 |
e-value: 3e-27 |
Identity: 27.27% |
Span: 873bp (72.9%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:19533576-19535713 FORWARD |
| Match: At2G23350.1 |
score: 82 |
e-value: 6e-16 |
Identity: 25.47% |
Span: 726bp (60.7%) |
Frame: 3 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G49760.1 |
score: 79 |
e-value: 5e-15 |
Identity: 24.53% |
Span: 720bp (60.2%) |
Frame: 3 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At1G22760.1 |
score: 75.9 |
e-value: 5e-14 |
Identity: 24.72% |
Span: 720bp (60.2%) |
Frame: 3 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At1G71770.1 |
score: 71.6 |
e-value: 9e-13 |
Identity: 23.97% |
Span: 720bp (60.2%) |
Frame: 3 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At4G16280.2 |
score: 67.8 |
e-value: 1e-11 |
Identity: 30.32% |
Span: 522bp (43.6%) |
Frame: 3 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE |
| Match: At4G16280.3 |
score: 67.8 |
e-value: 1e-11 |
Identity: 30.32% |
Span: 522bp (43.6%) |
Frame: 3 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE |
| Match: At5G06210.1 |
score: 66.2 |
e-value: 4e-11 |
Identity: 40% |
Span: 237bp (19.8%) |
Frame: 3 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At5G47620.1 |
score: 65.9 |
e-value: 5e-11 |
Identity: 27.91% |
Span: 447bp (37.3%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At5G47620.2 |
score: 65.9 |
e-value: 5e-11 |
Identity: 27.91% |
Span: 447bp (37.3%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At3G07810.2 |
score: 64.3 |
e-value: 1e-10 |
Identity: 27.38% |
Span: 429bp (35.8%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At3G07810.1 |
score: 64.3 |
e-value: 1e-10 |
Identity: 27.38% |
Span: 429bp (35.8%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At2G36660.1 |
score: 63.5 |
e-value: 2e-10 |
Identity: 20.93% |
Span: 834bp (69.7%) |
Frame: 3 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At5G55550.3 |
score: 63.2 |
e-value: 3e-10 |
Identity: 25.88% |
Span: 429bp (35.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.1 |
score: 63.2 |
e-value: 3e-10 |
Identity: 25.88% |
Span: 429bp (35.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At5G55550.2 |
score: 63.2 |
e-value: 3e-10 |
Identity: 25.88% |
Span: 429bp (35.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G40490.1 |
score: 60.5 |
e-value: 2e-09 |
Identity: 28.3% |
Span: 444bp (37.1%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD |
| Match: At1G54080.1 |
score: 60.1 |
e-value: 3e-09 |
Identity: 26.18% |
Span: 477bp (39.8%) |
Frame: 3 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At3G23830.2 |
score: 60.1 |
e-value: 3e-09 |
Identity: 33.33% |
Span: 276bp (23.1%) |
Frame: 3 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At3G23830.1 |
score: 60.1 |
e-value: 3e-09 |
Identity: 33.33% |
Span: 276bp (23.1%) |
Frame: 3 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At2G37510.1 |
score: 59.3 |
e-value: 4e-09 |
Identity: 42.67% |
Span: 222bp (18.5%) |
Frame: 3 |
| RNA-binding protein, putative | chr2:15750190-15751582 REVERSE |
| Match: At1G17640.1 |
score: 58.9 |
e-value: 6e-09 |
Identity: 30% |
Span: 438bp (36.6%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE |
| Match: At3G16380.1 |
score: 58.5 |
e-value: 7e-09 |
Identity: 24.38% |
Span: 795bp (66.4%) |
Frame: 3 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At3G16380.1 |
score: 58.5 |
e-value: 7e-09 |
Identity: 23.12% |
Span: 510bp (42.6%) |
Frame: 3 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G34140.1 |
score: 58.2 |
e-value: 1e-08 |
Identity: 21.45% |
Span: 753bp (62.9%) |
Frame: 3 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At1G74230.1 |
score: 57.8 |
e-value: 1e-08 |
Identity: 33.01% |
Span: 294bp (24.6%) |
Frame: 3 |
| Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
| Match: At1G58470.1 |
score: 57 |
e-value: 2e-08 |
Identity: 23.56% |
Span: 564bp (47.1%) |
Frame: 3 |
| Symbols: RBP1, XF41, ATRBP1 | ATRBP1 (RNA-BINDING PROTEIN 1); RNA binding | chr1:21731039-21732204 FORWARD |
| Match: At1G45100.1 |
score: 56.6 |
e-value: 3e-08 |
Identity: 28.29% |
Span: 426bp (35.6%) |
Frame: 3 |
| polyadenylate-binding protein, putative / PABP, putative | chr1:17053071-17054629 FORWARD |
| Match: At3G14100.1 |
score: 56.2 |
e-value: 4e-08 |
Identity: 25.14% |
Span: 453bp (37.8%) |
Frame: 3 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At3G20930.1 |
score: 56.2 |
e-value: 4e-08 |
Identity: 36.11% |
Span: 213bp (17.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:7331745-7333755 FORWARD |
| Match: At1G54080.2 |
score: 55.8 |
e-value: 5e-08 |
Identity: 26.67% |
Span: 477bp (39.8%) |
Frame: 3 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At4G14300.1 |
score: 55.5 |
e-value: 6e-08 |
Identity: 27.06% |
Span: 429bp (35.8%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
| Match: At3G13224.2 |
score: 55.1 |
e-value: 8e-08 |
Identity: 27.54% |
Span: 450bp (37.6%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At3G13224.1 |
score: 55.1 |
e-value: 8e-08 |
Identity: 27.54% |
Span: 450bp (37.6%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At4G03110.2 |
score: 54.7 |
e-value: 1e-07 |
Identity: 25.85% |
Span: 582bp (48.6%) |
Frame: 3 |
| RNA-binding protein, putative | chr4:1376710-1379275 REVERSE |
| Match: At4G03110.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 25.85% |
Span: 582bp (48.6%) |
Frame: 3 |
| RNA-binding protein, putative | chr4:1376612-1379275 REVERSE |
| Match: At5G61030.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 33.77% |
Span: 228bp (19.0%) |
Frame: 3 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At3G26420.1 |
score: 54.3 |
e-value: 1e-07 |
Identity: 36.62% |
Span: 210bp (17.5%) |
Frame: 3 |
| Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
| Match: At1G73530.1 |
score: 54.3 |
e-value: 1e-07 |
Identity: 34.72% |
Span: 213bp (17.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:27647462-27649047 REVERSE |
| Match: At3G18610.1 |
score: 53.9 |
e-value: 2e-07 |
Identity: 26.89% |
Span: 576bp (48.1%) |
Frame: 3 |
| Symbols: ATRANGAP1 | ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding | chr3:6404276-6407828 REVERSE |
| Match: At1G03457.1 |
score: 53.9 |
e-value: 2e-07 |
Identity: 25.13% |
Span: 561bp (46.9%) |
Frame: 3 |
| RNA-binding protein, putative | chr1:861109-864019 REVERSE |
| Match: At3G46020.1 |
score: 53.5 |
e-value: 2e-07 |
Identity: 35.56% |
Span: 264bp (22.1%) |
Frame: 3 |
| RNA-binding protein, putative | chr3:16923496-16924235 REVERSE |
| Match: At5G19960.1 |
score: 53.1 |
e-value: 3e-07 |
Identity: 32.98% |
Span: 279bp (23.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:6744031-6746135 FORWARD |
| Match: At4G39260.3 |
score: 52.8 |
e-value: 4e-07 |
Identity: 32.58% |
Span: 264bp (22.1%) |
Frame: 3 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At1G17370.1 |
score: 52.8 |
e-value: 4e-07 |
Identity: 25.41% |
Span: 459bp (38.3%) |
Frame: 3 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At3G08000.1 |
score: 52.4 |
e-value: 5e-07 |
Identity: 31.43% |
Span: 309bp (25.8%) |
Frame: 3 |
| RNA-binding protein, putative | chr3:2555040-2555835 REVERSE |
| Match: At3G16380.1 |
score: 52.4 |
e-value: 5e-07 |
Identity: 28.24% |
Span: 255bp (21.3%) |
Frame: 3 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At4G39260.1 |
score: 52.4 |
e-value: 5e-07 |
Identity: 36.62% |
Span: 210bp (17.5%) |
Frame: 3 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At4G39260.2 |
score: 52.4 |
e-value: 5e-07 |
Identity: 36.62% |
Span: 210bp (17.5%) |
Frame: 3 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At5G54580.1 |
score: 52 |
e-value: 7e-07 |
Identity: 35.14% |
Span: 219bp (18.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:22188558-22189882 FORWARD |
| Match: At5G44200.1 |
score: 51.6 |
e-value: 9e-07 |
Identity: 35.71% |
Span: 243bp (20.3%) |
Frame: 3 |
| Symbols: ATCBP20, CBP20 | CBP20 (CAP-BINDING PROTEIN 20); RNA binding | chr5:17819289-17821102 REVERSE |
| Match: At2G33410.1 |
score: 51.6 |
e-value: 9e-07 |
Identity: 23.46% |
Span: 405bp (33.8%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr2:14163161-14164511 FORWARD |
| Match: At3G15010.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 28.14% |
Span: 453bp (37.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:5052851-5054065 FORWARD |
| Match: At3G15010.2 |
score: 51.2 |
e-value: 1e-06 |
Identity: 28.14% |
Span: 453bp (37.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:5052851-5054065 FORWARD |
| Match: At5G51300.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 32.5% |
Span: 237bp (19.8%) |
Frame: 3 |
| splicing factor-related | chr5:20867107-20869521 REVERSE |
| Match: At2G27330.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 34.29% |
Span: 207bp (17.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr2:11702428-11703641 REVERSE |
| Match: At1G71770.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 23.04% |
Span: 477bp (39.8%) |
Frame: 3 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At5G51300.2 |
score: 51.2 |
e-value: 1e-06 |
Identity: 32.5% |
Span: 237bp (19.8%) |
Frame: 3 |
| splicing factor-related | chr5:20867107-20869521 REVERSE |
| Match: At5G51300.3 |
score: 51.2 |
e-value: 1e-06 |
Identity: 32.5% |
Span: 237bp (19.8%) |
Frame: 3 |
| nucleic acid binding / nucleotide binding / zinc ion binding | chr5:20867107-20869521 REVERSE |
| Match: At1G03457.2 |
score: 50.4 |
e-value: 2e-06 |
Identity: 24.04% |
Span: 561bp (46.9%) |
Frame: 3 |
| RNA-binding protein, putative | chr1:861109-864019 REVERSE |
| Match: At1G22760.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 25.79% |
Span: 474bp (39.6%) |
Frame: 3 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At2G18510.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 24.84% |
Span: 453bp (37.8%) |
Frame: 3 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At1G18630.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 35.06% |
Span: 228bp (19.0%) |
Frame: 3 |
| Symbols: GR-RBP6 | GR-RBP6 (glycine-rich RNA-binding protein 6); RNA binding | chr1:6415218-6416275 FORWARD |
| Match: At2G16260.1 |
score: 49.7 |
e-value: 3e-06 |
Identity: 34.94% |
Span: 246bp (20.6%) |
Frame: 3 |
| | Symbol: None | glycine-rich RNA-binding protein, putative, similar to Glycine-rich RNA-binding protein from {Daucus... |
| Match: At4G13860.1 |
score: 49.7 |
e-value: 3e-06 |
Identity: 29.33% |
Span: 222bp (18.5%) |
Frame: 3 |
| glycine-rich RNA-binding protein, putative | chr4:8022597-8023158 FORWARD |
| Match: At1G60000.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 31.33% |
Span: 246bp (20.6%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At2G23350.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 31.94% |
Span: 216bp (18.0%) |
Frame: 3 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At2G36660.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 36.71% |
Span: 231bp (19.3%) |
Frame: 3 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At5G04280.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 33.33% |
Span: 195bp (16.3%) |
Frame: 3 |
| glycine-rich RNA-binding protein | chr5:1192462-1195414 FORWARD |
| Match: At3G53460.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 22.22% |
Span: 729bp (60.9%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At2G21660.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 33.8% |
Span: 210bp (17.5%) |
Frame: 3 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded D... |
| Match: At2G21660.2 |
score: 48.9 |
e-value: 6e-06 |
Identity: 33.8% |
Span: 210bp (17.5%) |
Frame: 3 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding | chr2:9272557-9273... |
| Match: At2G37220.1 |
score: 48.5 |
e-value: 8e-06 |
Identity: 33.33% |
Span: 222bp (18.5%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At2G22090.1 |
score: 48.5 |
e-value: 8e-06 |
Identity: 37.93% |
Span: 240bp (20.1%) |
Frame: 3 |
| Symbols: UBA1A | UBA1A; AU-specific RNA binding / RNA binding | chr2:9395651-9397530 REVERSE |
| Match: At3G10845.1 |
score: 48.5 |
e-value: 8e-06 |
Identity: 24% |
Span: 708bp (59.1%) |
Frame: 3 |
| | Symbol: None | RNA recognition motif (RRM)-containing protein, similar to SP:P42731 Polyadenylate-binding protein 2... |
| Match: At2G22090.2 |
score: 48.5 |
e-value: 8e-06 |
Identity: 37.93% |
Span: 240bp (20.1%) |
Frame: 3 |
| Symbols: UBA1A | UBA1A; RNA binding | chr2:9396487-9397530 REVERSE |
| Match: At4G14300.1 |
score: 48.5 |
e-value: 8e-06 |
Identity: 32.53% |
Span: 246bp (20.6%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
| Match: At5G47320.1 |
score: 48.1 |
e-value: 1e-05 |
Identity: 27.71% |
Span: 246bp (20.6%) |
Frame: 3 |
| Symbols: RPS19 | RPS19 (40S ribosomal protein S19); RNA binding | chr5:19221028-19222178 FORWARD |
| Match: At5G47620.3 |
score: 48.1 |
e-value: 1e-05 |
Identity: 32.5% |
Span: 237bp (19.8%) |
Frame: 3 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321332 REVERSE |
| Match: At4G34110.1 |
score: 48.1 |
e-value: 1e-05 |
Identity: 28.89% |
Span: 252bp (21.1%) |
Frame: 3 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G47500.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 33.33% |
Span: 294bp (24.6%) |
Frame: 3 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At5G41690.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 39.44% |
Span: 213bp (17.8%) |
Frame: 3 |
| RNA binding | chr5:16687354-16691417 REVERSE |
| Match: At3G53460.2 |
score: 47.8 |
e-value: 1e-05 |
Identity: 25.51% |
Span: 279bp (23.3%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At4G34110.1 |
score: 47.4 |
e-value: 2e-05 |
Identity: 22.61% |
Span: 630bp (52.6%) |
Frame: 3 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At3G53460.2 |
score: 47.4 |
e-value: 2e-05 |
Identity: 32% |
Span: 222bp (18.5%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G53460.1 |
score: 47.4 |
e-value: 2e-05 |
Identity: 32% |
Span: 222bp (18.5%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At4G34110.1 |
score: 47 |
e-value: 2e-05 |
Identity: 28% |
Span: 225bp (18.8%) |
Frame: 3 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At5G41690.1 |
score: 47 |
e-value: 2e-05 |
Identity: 35.06% |
Span: 231bp (19.3%) |
Frame: 3 |
| RNA binding | chr5:16687354-16691417 REVERSE |
| Match: At3G13224.1 |
score: 46.2 |
e-value: 4e-05 |
Identity: 33.33% |
Span: 195bp (16.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At3G13224.2 |
score: 46.2 |
e-value: 4e-05 |
Identity: 33.33% |
Span: 195bp (16.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At2G37220.1 |
score: 45.8 |
e-value: 5e-05 |
Identity: 22.35% |
Span: 432bp (36.1%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At4G16280.2 |
score: 45.1 |
e-value: 9e-05 |
Identity: 30.77% |
Span: 222bp (18.5%) |
Frame: 3 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE |
| Match: At4G16280.3 |
score: 45.1 |
e-value: 9e-05 |
Identity: 30.77% |
Span: 222bp (18.5%) |
Frame: 3 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE |
| Match: At3G14100.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 21.69% |
Span: 699bp (58.4%) |
Frame: 3 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At2G18510.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 27.38% |
Span: 246bp (20.6%) |
Frame: 3 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At1G45100.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 34.52% |
Span: 234bp (19.5%) |
Frame: 3 |
| polyadenylate-binding protein, putative / PABP, putative | chr1:17053071-17054629 FORWARD |
|
| 136 lower scoring hits censored -- only 100 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|18411454|ref|NP_567192.1| |
score: 147 |
e-value: 1e-33 |
Identity: 33.96% |
Span: 783bp (65.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79324963|ref|NP_001031566.1| RNA recognition... |
| Match: gi|92897076|gb|ABE93532.1| |
score: 147 |
e-value: 7e-34 |
Identity: 33.58% |
Span: 807bp (67.4%) |
Frame: 3 |
| RNA-binding |
| Match: gi|77549578|gb|ABA92375.1| |
score: 145 |
e-value: 4e-33 |
Identity: 34.83% |
Span: 786bp (65.7%) |
Frame: 3 |
| gi|77549578|gb|ABA92375.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa (japonica ... |
| Match: gi|5031512|gb|AAD38198.1| |
score: 144 |
e-value: 8e-33 |
Identity: 32.65% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|5031512|gb|AAD38198.1| NSAP1 protein [Homo sapiens] |
| Match: gi|47213373|emb|CAF90992.1| |
score: 144 |
e-value: 8e-33 |
Identity: 33.33% |
Span: 897bp (74.9%) |
Frame: 3 |
| gi|47213373|emb|CAF90992.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|109485130|ref|XP_001065902.1| |
score: 143 |
e-value: 1e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|82568969|gb|AAI08364.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| Unknown |
| Match: gi|109071943|ref|XP_001088618.1| |
score: 142 |
e-value: 2e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|109071931|ref|XP_001088952.1| |
score: 142 |
e-value: 2e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|27370721|gb|AAH41148.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|27370721|gb|AAH41148.1| Nsap1-pending protein [Mus musculus] |
| Match: gi|29788787|ref|NP_062770.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|29788787|ref|NP_062770.1| NS1-associated protein 1; synaptotagmin-binding, cytoplasmic RNA-interacting protein; RR... |
| Match: gi|26347007|dbj|BAC37152.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.65% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|26347007|dbj|BAC37152.1| unnamed protein product [Mus musculus] |
| Match: gi|109071947|ref|XP_001089415.1| |
score: 142 |
e-value: 2e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|109071941|ref|XP_001088724.1| |
score: 142 |
e-value: 2e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|33416526|gb|AAH55863.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|33416526|gb|AAH55863.1| Nsap1l-pending protein [Mus musculus] |
| Match: gi|51329959|gb|AAH80309.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|51329959|gb|AAH80309.1| NS1-associated protein 1 [Mus musculus] >gi|6576815|dbj|BAA88342.1| SYNCRIP [Mus musculus] |
| Match: gi|62087776|dbj|BAD92335.1| |
score: 142 |
e-value: 2e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|62087776|dbj|BAD92335.1| synaptotagmin binding, cytoplasmic RNA interacting protein variant [Homo sapiens] |
| Match: gi|109071953|ref|XP_001088849.1| |
score: 142 |
e-value: 2e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|55627020|ref|XP_518621.1| |
score: 142 |
e-value: 2e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|55627020|ref|XP_518621.1| PREDICTED: similar to Syncrip protein [Pan troglodytes] |
| Match: gi|37589144|gb|AAH58807.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|37589144|gb|AAH58807.1| Nsap1-pending protein [Mus musculus] |
| Match: gi|73973886|ref|XP_532223.2| |
score: 142 |
e-value: 2e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|73973886|ref|XP_532223.2| PREDICTED: similar to NS1-associated protein 1 isoform 2 [Canis familiaris] |
| Match: gi|44888326|sp|Q7TMK9|HNRPQ_MOUSE |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|44888326|sp|Q7TMK9|HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q) (Synaptotagmin bindin... |
| Match: gi|15986735|gb|AAL11726.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|15986735|gb|AAL11726.1| RRM RNA binding protein NSAP1 [Mus musculus] |
| Match: gi|109483772|ref|XP_343447.3| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|33086582|gb|AAP92603.1| |
score: 142 |
e-value: 3e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|33086582|gb|AAP92603.1| Ab2-339 [Rattus norvegicus] |
| Match: gi|50927259|ref|XP_473377.1| |
score: 142 |
e-value: 2e-32 |
Identity: 31.18% |
Span: 822bp (68.7%) |
Frame: 3 |
| gi|50927259|ref|XP_473377.1| OSJNBb0103I08.18 [Oryza sativa (japonica cultivar-group)] >gi|38345949|emb|CAE04337.2| O... |
| Match: gi|29747829|gb|AAH50079.1| |
score: 141 |
e-value: 5e-32 |
Identity: 32.3% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|29747829|gb|AAH50079.1| Nsap1-pending protein [Mus musculus] |
| Match: gi|68369596|ref|XP_685178.1| |
score: 141 |
e-value: 7e-32 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|68369596|ref|XP_685178.1| PREDICTED: similar to apobec-1 complementation factor isoform 2 isoform 1 [Danio rerio] |
| Match: gi|68369598|ref|XP_707799.1| |
score: 141 |
e-value: 7e-32 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|68369598|ref|XP_707799.1| PREDICTED: similar to apobec-1 complementation factor isoform 1 isoform 2 [Danio rerio] |
| Match: gi|23397427|ref|NP_006363.3| |
score: 140 |
e-value: 1e-31 |
Identity: 31.96% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|23397427|ref|NP_006363.3| NS1-associated protein 1 [Homo sapiens] gi|3037013|gb|AAC12926.1| Gry-rbp [Homo sapiens]... |
| Match: gi|47122815|gb|AAH70529.1| |
score: 140 |
e-value: 2e-31 |
Identity: 31.77% |
Span: 891bp (74.4%) |
Frame: 3 |
| gi|47122815|gb|AAH70529.1| Unknown (protein for MGC:78820) [Xenopus laevis] |
| Match: gi|29371361|gb|AAO72701.1| |
score: 140 |
e-value: 1e-31 |
Identity: 29.78% |
Span: 921bp (76.9%) |
Frame: 3 |
| putative RNA-binding protein [Oryza sativa Japonica Group] |
| Match: gi|108862166|gb|ABG21876.1| |
score: 140 |
e-value: 1e-31 |
Identity: 29.78% |
Span: 921bp (76.9%) |
Frame: 3 |
| RNA |
| Match: gi|13242328|ref|NP_062640.1| |
score: 140 |
e-value: 9e-32 |
Identity: 32.31% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|13242328|ref|NP_062640.1| NS1-associated protein 1-like; RRM RNA binding protein GRY-RBP [Mus musculus] gi|3694986... |
| Match: gi|15809590|gb|AAK59705.1| |
score: 140 |
e-value: 1e-31 |
Identity: 31.96% |
Span: 864bp (72.2%) |
Frame: 3 |
| gi|15809590|gb|AAK59705.1| hnRNP Q1 [Homo sapiens] |
| Match: gi|37359248|gb|AAN77868.1| |
score: 140 |
e-value: 9e-32 |
Identity: 32.27% |
Span: 822bp (68.7%) |
Frame: 3 |
| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera] |
| Match: gi|62122943|ref|NP_001006309.2| |
score: 139 |
e-value: 3e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|62122943|ref|NP_001006309.2| heterogeneous nuclear ribonucleoprotein R [Gallus gallus] |
| Match: gi|109089795|ref|XP_001100414.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|19173760|ref|NP_596891.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|19173760|ref|NP_596891.1| Apobec-1 complementation factor, APOBEC-1 stimulating protein [Rattus norvegicus] gi|150... |
| Match: gi|27462520|gb|AAO15466.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|27462520|gb|AAO15466.1| APOBEC-1 complementation factor 45 kDa variant [Rattus norvegicus] |
| Match: gi|58477316|gb|AAH89622.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.56% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|58477316|gb|AAH89622.1| 1810073H04Rik protein [Mus musculus] |
| Match: gi|27462518|gb|AAO15465.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|27462518|gb|AAO15465.1| APOBEC-1 complementation factor 43 kDa variant [Rattus norvegicus] |
| Match: gi|109089791|ref|XP_001100239.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|94406666|ref|XP_001002678.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.56% |
Span: 798bp (66.7%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|33874520|gb|AAH15575.1| |
score: 139 |
e-value: 2e-31 |
Identity: 32.74% |
Span: 834bp (69.7%) |
Frame: 3 |
| gi|33874520|gb|AAH15575.1| NSAP1 protein [Homo sapiens] |
| Match: gi|78707790|gb|ABB46765.1| |
score: 139 |
e-value: 3e-31 |
Identity: 33.09% |
Span: 786bp (65.7%) |
Frame: 3 |
| gi|78707790|gb|ABB46765.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa (japonica ... |
| Match: gi|55729715|emb|CAH91586.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|55729715|emb|CAH91586.1| hypothetical protein [Pongo pygmaeus] |
| Match: gi|47212367|emb|CAF89932.1| |
score: 139 |
e-value: 2e-31 |
Identity: 32.39% |
Span: 846bp (70.7%) |
Frame: 3 |
| gi|47212367|emb|CAF89932.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|37531112|ref|NP_919858.1| |
score: 139 |
e-value: 3e-31 |
Identity: 33.09% |
Span: 786bp (65.7%) |
Frame: 3 |
| gi|37531112|ref|NP_919858.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|18425248|gb|AAL... |
| Match: gi|15072439|gb|AAK50145.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.19% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|15072439|gb|AAK50145.1| APOBEC-1 complementation factor long isoform [Rattus norvegicus] |
| Match: gi|94406662|ref|XP_001002672.1| |
score: 139 |
e-value: 3e-31 |
Identity: 35.56% |
Span: 798bp (66.7%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|108999072|ref|XP_001111802.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|74228775|dbj|BAE21877.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|74228775|dbj|BAE21877.1| unnamed protein product [Mus musculus] |
| Match: gi|76611467|ref|XP_885447.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|76611467|ref|XP_885447.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein R isoform 6 [Bos taurus] >... |
| Match: gi|74207436|dbj|BAE30898.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|74207436|dbj|BAE30898.1| unnamed protein product [Mus musculus] |
| Match: gi|33859724|ref|NP_083147.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|33859724|ref|NP_083147.1| heterogeneous nuclear ribonucleoprotein R [Mus musculus] gi|17066599|gb|AAL35332.1| hete... |
| Match: gi|5031755|ref|NP_005817.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|5031755|ref|NP_005817.1| heterogeneous nuclear ribonucleoprotein R [Homo sapiens] gi|12230547|sp|O43390|ROR_HUMAN ... |
| Match: gi|50346317|gb|AAT74917.1| |
score: 138 |
e-value: 6e-31 |
Identity: 35.56% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|50346317|gb|AAT74917.1| APOBEC-1 stimulating protein [Mus musculus] |
| Match: gi|55586435|ref|XP_513191.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|55586435|ref|XP_513191.1| PREDICTED: similar to hypothetical protein [Pan troglodytes] |
| Match: gi|111494085|gb|AAI10390.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| Unknown |
| Match: gi|27903509|gb|AAO24773.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|27903509|gb|AAO24773.1| heterogeneous nuclear ribonucleoprotein R [Rattus norvegicus] |
| Match: gi|74194838|dbj|BAE26010.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|74194838|dbj|BAE26010.1| unnamed protein product [Mus musculus] |
| Match: gi|50346319|gb|AAT74918.1| |
score: 138 |
e-value: 6e-31 |
Identity: 35.56% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|50346319|gb|AAT74918.1| truncated APOBEC-1 stimulating protein [Mus musculus] |
| Match: gi|89272515|emb|CAJ81560.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.37% |
Span: 828bp (69.2%) |
Frame: 3 |
| heterogeneous |
| Match: gi|62471548|gb|AAH93598.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| Heterogeneous |
| Match: gi|13435603|gb|AAH04679.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|13435603|gb|AAH04679.1| Hnrpr protein [Mus musculus] |
| Match: gi|74219109|dbj|BAE26696.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|74219109|dbj|BAE26696.1| unnamed protein product [Mus musculus] |
| Match: gi|55732180|emb|CAH92794.1| |
score: 138 |
e-value: 6e-31 |
Identity: 32.01% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|55732180|emb|CAH92794.1| hypothetical protein [Pongo pygmaeus] |
| Match: gi|50346315|gb|AAT74916.1| |
score: 138 |
e-value: 6e-31 |
Identity: 35.56% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|50346315|gb|AAT74916.1| APOBEC-1 stimulating protein [Mus musculus] |
| Match: gi|55633925|ref|XP_521478.1| |
score: 137 |
e-value: 1e-30 |
Identity: 34.57% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|55633925|ref|XP_521478.1| PREDICTED: similar to apobec-1 complementation factor isoform 2; APOBEC-1 stimulating pr... |
| Match: gi|108863978|gb|ABA91387.2| |
score: 137 |
e-value: 1e-30 |
Identity: 29.47% |
Span: 921bp (76.9%) |
Frame: 3 |
| RNA recognition motif family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|8515877|gb|AAF76221.1| |
score: 137 |
e-value: 1e-30 |
Identity: 34.57% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|8515877|gb|AAF76221.1| APOBEC-1 complementation factor [Homo sapiens] |
| Match: gi|12655185|gb|AAH01449.1| |
score: 137 |
e-value: 1e-30 |
Identity: 31.67% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|12655185|gb|AAH01449.1| HNRPR protein [Homo sapiens] |
| Match: gi|110740397|dbj|BAF02093.1| |
score: 137 |
e-value: 8e-31 |
Identity: 30.07% |
Span: 852bp (71.2%) |
Frame: 3 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|46249711|gb|AAH68373.1| |
score: 137 |
e-value: 1e-30 |
Identity: 32.64% |
Span: 858bp (71.7%) |
Frame: 3 |
| gi|46249711|gb|AAH68373.1| Synaptotagmin binding, cytoplasmic RNA interacting protein [Danio rerio] >gi|34784487|gb|A... |
| Match: gi|20357575|ref|NP_620310.1| |
score: 137 |
e-value: 1e-30 |
Identity: 34.57% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|20357575|ref|NP_620310.1| apobec-1 complementation factor isoform 2; APOBEC-1 stimulating protein; apo-B RNA editi... |
| Match: gi|30689808|ref|NP_850422.1| |
score: 137 |
e-value: 8e-31 |
Identity: 30.07% |
Span: 852bp (71.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20147226|gb|AAM10328.1| At2g44720/F16B22.21 ... |
| Match: gi|34365228|emb|CAE45953.1| |
score: 137 |
e-value: 1e-30 |
Identity: 31.67% |
Span: 828bp (69.2%) |
Frame: 3 |
| gi|34365228|emb|CAE45953.1| hypothetical protein [Homo sapiens] |
| Match: gi|20357578|ref|NP_620311.1| |
score: 137 |
e-value: 1e-30 |
Identity: 34.57% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|20357578|ref|NP_620311.1| apobec-1 complementation factor isoform 3; APOBEC-1 stimulating protein; apo-B RNA editi... |
| Match: gi|20357572|ref|NP_055391.2| |
score: 137 |
e-value: 1e-30 |
Identity: 34.57% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|20357572|ref|NP_055391.2| apobec-1 complementation factor isoform 1; APOBEC-1 stimulating protein; apo-B RNA editi... |
| Match: gi|8515879|gb|AAF76222.1| |
score: 137 |
e-value: 1e-30 |
Identity: 34.57% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|8515879|gb|AAF76222.1| APOBEC-1 complementation factor related protein [Homo sapiens] |
| Match: gi|92888348|gb|ABE89366.1| |
score: 136 |
e-value: 2e-30 |
Identity: 34.42% |
Span: 801bp (66.9%) |
Frame: 3 |
| RNA |
| Match: gi|55233929|gb|EAA43191.2| |
score: 135 |
e-value: 5e-30 |
Identity: 31.54% |
Span: 873bp (72.9%) |
Frame: 3 |
| gi|55233929|gb|EAA43191.2| ENSANGP00000023817 [Anopheles gambiae str. PEST] >gi|58396167|ref|XP_321712.2| ENSANGP0000... |
| Match: gi|6996658|gb|AAF34824.1| |
score: 135 |
e-value: 4e-30 |
Identity: 34.2% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|6996658|gb|AAF34824.1| Apobec-1 complementation factor [Homo sapiens] |
| Match: gi|73995983|ref|XP_534776.2| |
score: 135 |
e-value: 3e-30 |
Identity: 34.44% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|73995983|ref|XP_534776.2| PREDICTED: similar to apobec-1 complementation factor isoform 2 isoform 1 [Canis familia... |
| Match: gi|109071939|ref|XP_001088395.1| |
score: 135 |
e-value: 4e-30 |
Identity: 31.65% |
Span: 828bp (69.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|109071951|ref|XP_001089067.1| |
score: 135 |
e-value: 5e-30 |
Identity: 31.65% |
Span: 828bp (69.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|47219493|emb|CAG10857.1| |
score: 135 |
e-value: 4e-30 |
Identity: 32.5% |
Span: 834bp (69.7%) |
Frame: 3 |
| gi|47219493|emb|CAG10857.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|73995985|ref|XP_861026.1| |
score: 135 |
e-value: 3e-30 |
Identity: 34.44% |
Span: 798bp (66.7%) |
Frame: 3 |
| gi|73995985|ref|XP_861026.1| PREDICTED: similar to apobec-1 complementation factor isoform 1 isoform 3 [Canis familia... |
| Match: gi|47209668|emb|CAF95095.1| |
score: 134 |
e-value: 6e-30 |
Identity: 34.44% |
Span: 801bp (66.9%) |
Frame: 3 |
| gi|47209668|emb|CAF95095.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|72139701|ref|XP_789756.1| |
score: 134 |
e-value: 6e-30 |
Identity: 32.84% |
Span: 804bp (67.2%) |
Frame: 3 |
| gi|72139701|ref|XP_789756.1| PREDICTED: similar to apobec-1 complementation factor isoform 1, partial [Strongylocentr... |
| Match: gi|37681889|gb|AAQ97822.1| |
score: 134 |
e-value: 8e-30 |
Identity: 33.22% |
Span: 852bp (71.2%) |
Frame: 3 |
| gi|37681889|gb|AAQ97822.1| NS1-associated protein 1 [Danio rerio] |
| Match: gi|46362505|gb|AAH66570.1| |
score: 134 |
e-value: 8e-30 |
Identity: 33.22% |
Span: 852bp (71.2%) |
Frame: 3 |
| gi|46362505|gb|AAH66570.1| NS1-associated protein 1 [Danio rerio] |
| Match: gi|72008010|ref|XP_781163.1| |
score: 134 |
e-value: 6e-30 |
Identity: 32.84% |
Span: 804bp (67.2%) |
Frame: 3 |
| gi|72008010|ref|XP_781163.1| PREDICTED: similar to apobec-1 complementation factor isoform 1 [Strongylocentrotus purp... |
| Match: gi|20450941|gb|AAM21973.1| |
score: 133 |
e-value: 2e-29 |
Identity: 33.33% |
Span: 801bp (66.9%) |
Frame: 3 |
| gi|20450941|gb|AAM21973.1| RNA-binding protein [Homo sapiens] |
| Match: gi|55732443|emb|CAH92922.1| |
score: 133 |
e-value: 2e-29 |
Identity: 33.33% |
Span: 801bp (66.9%) |
Frame: 3 |
| gi|55732443|emb|CAH92922.1| hypothetical protein [Pongo pygmaeus] |
| Match: gi|28422490|gb|AAH46902.1| |
score: 133 |
e-value: 2e-29 |
Identity: 33.22% |
Span: 852bp (71.2%) |
Frame: 3 |
| gi|28422490|gb|AAH46902.1| Similar to NS1-associated protein 1 [Danio rerio] |
| Match: gi|109074067|ref|XP_001095581.1| |
score: 133 |
e-value: 2e-29 |
Identity: 33.33% |
Span: 801bp (66.9%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|55622410|ref|XP_517160.1| |
score: 133 |
e-value: 2e-29 |
Identity: 33.33% |
Span: 801bp (66.9%) |
Frame: 3 |
| gi|55622410|ref|XP_517160.1| PREDICTED: similar to RNA-binding protein [Pan troglodytes] |
| Match: gi|109074069|ref|XP_001094904.1| |
score: 133 |
e-value: 2e-29 |
Identity: 33.33% |
Span: 801bp (66.9%) |
Frame: 3 |
| PREDICTED: |
|
| 268 lower scoring hits censored -- only 100 best hits are stored. |
