| genbank/nr [blastx] | Showing best 59 hits recorded |
| Match: gi|15241324|ref|NP_196921.1| |
score: 384 |
e-value: 3e-105 |
Identity: 72.48% |
Span: 765bp (63.1%) |
Frame: 3 |
| CHC1 [Arabidopsis thaliana] >gi73622093|sp|Q9FMT4.1|SNF12_ARATH RecName: Full=SWI/SNF complex component SNF12 homolog... |
| Match: gi|38346638|emb|CAD40740.2| |
score: 297.4 |
e-value: 3.6e-79 |
Identity: 66.35% |
Span: 630bp (51.9%) |
Frame: 3 |
| OSJNBa0072D21.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|6091729|gb|AAF03441.1| |
score: 284.3 |
e-value: 3.1e-75 |
Identity: 60.41% |
Span: 726bp (59.9%) |
Frame: 3 |
| gi|6091729|gb|AAF03441.1| unknown protein [Arabidopsis thaliana] gi|6513942|gb|AAF14846.1| unknown protein [Arabidops... |
| Match: gi|30678449|ref|NP_566154.2| |
score: 284.3 |
e-value: 3.1e-75 |
Identity: 60.41% |
Span: 726bp (59.9%) |
Frame: 3 |
| SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] >gi109946633|gb|ABG48495.1| At3g01890 [Arabidops... |
| Match: gi|26453080|dbj|BAC43616.1| |
score: 283.1 |
e-value: 7e-75 |
Identity: 60.41% |
Span: 726bp (59.9%) |
Frame: 3 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|17557143|ref|NP_499250.1| |
score: 163.7 |
e-value: 6.2e-39 |
Identity: 40.29% |
Span: 615bp (50.7%) |
Frame: 3 |
| gi|17557143|ref|NP_499250.1| swi SNF-related matrix-associated actin-dependent regulator of chromatin d1 (51.7 kD) (3... |
| Match: gi|39590663|emb|CAE65033.1| |
score: 160.6 |
e-value: 5.2e-38 |
Identity: 39.81% |
Span: 615bp (50.7%) |
Frame: 3 |
| gi|39590663|emb|CAE65033.1| Hypothetical protein CBG09873 [Caenorhabditis briggsae] |
| Match: gi|7496288|pir||T15185 |
score: 157.5 |
e-value: 4.4e-37 |
Identity: 37.25% |
Span: 732bp (60.3%) |
Frame: 3 |
| gi|7496288|pir||T15185 hypothetical protein C18E3.2 - Caenorhabditis elegans |
| Match: gi|25143862|ref|NP_491329.2| |
score: 157.5 |
e-value: 4.4e-37 |
Identity: 37.25% |
Span: 732bp (60.3%) |
Frame: 3 |
| gi|25143862|ref|NP_491329.2| SWI SNF related matrix associated actin dependent regulator of chromatin subfamily D mem... |
| Match: gi|3378134|gb|AAC28455.1| |
score: 156 |
e-value: 1.3e-36 |
Identity: 38.1% |
Span: 624bp (51.4%) |
Frame: 3 |
| gi|3378134|gb|AAC28455.1| brahma associated protein 60 kDa [Drosophila melanogaster] |
| Match: gi|24641689|ref|NP_511143.2| |
score: 156 |
e-value: 1.3e-36 |
Identity: 38.1% |
Span: 624bp (51.4%) |
Frame: 3 |
| gi|24641689|ref|NP_511143.2| Brahma associated protein 60kD CG4303-PA [Drosophila melanogaster] gi|7292842|gb|AAF4823... |
| Match: gi|47220711|emb|CAG11780.1| |
score: 154.8 |
e-value: 2.9e-36 |
Identity: 33.21% |
Span: 741bp (61.1%) |
Frame: 3 |
| gi|47220711|emb|CAG11780.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|38198635|ref|NP_938172.1| |
score: 154.5 |
e-value: 3.7e-36 |
Identity: 32.85% |
Span: 753bp (62.1%) |
Frame: 3 |
| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Danio rerio] >gi29... |
| Match: gi|31200313|ref|XP_309104.1| |
score: 152.5 |
e-value: 1.4e-35 |
Identity: 38.65% |
Span: 615bp (50.7%) |
Frame: 3 |
| gi|31200313|ref|XP_309104.1| ENSANGP00000020546 [Anopheles gambiae] gi|21292824|gb|EAA04969.1| ENSANGP00000020546 [An... |
| Match: gi|90653|pir||A30222 |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|90653|pir||A30222 hypothetical D15Kz1 protein - mouse (fragment) gi|576884|gb|AAA53377.1| D15Kzl |
| Match: gi|4566530|gb|AAD23390.1| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|4566530|gb|AAD23390.1| SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin D1 [Homo sapiens] |
| Match: gi|27808676|sp|Q61466|SCD1_MOUSE |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|27808676|sp|Q61466|SCD1_MOUSE SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily... |
| Match: gi|31455235|gb|AAH09368.2| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|31455235|gb|AAH09368.2| SMARCD1 protein [Homo sapiens] |
| Match: gi|20070148|ref|NP_003067.2| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|20070148|ref|NP_003067.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d1 isoform a; R... |
| Match: gi|21264348|ref|NP_620710.1| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|21264348|ref|NP_620710.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d1 isoform b; R... |
| Match: gi|1549243|gb|AAC50695.1| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|1549243|gb|AAC50695.1| SWI/SNF complex 60 KDa subunit [Homo sapiens] |
| Match: gi|28278760|gb|AAH45009.1| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.58% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|28278760|gb|AAH45009.1| similar to SWI/SNF related [Xenopus laevis] |
| Match: gi|27693623|gb|AAH26783.2| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|27693623|gb|AAH26783.2| Unknown (protein for IMAGE:4481097) [Mus musculus] |
| Match: gi|34868177|ref|XP_343333.1| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|34868177|ref|XP_343333.1| similar to SMARCD1 protein [Rattus norvegicus] |
| Match: gi|13937377|ref|NP_114030.1| |
score: 151 |
e-value: 4.1e-35 |
Identity: 32.46% |
Span: 735bp (60.6%) |
Frame: 3 |
| gi|13937377|ref|NP_114030.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d,... |
| Match: gi|31212729|ref|XP_315349.1| |
score: 150.6 |
e-value: 5.4e-35 |
Identity: 37.8% |
Span: 615bp (50.7%) |
Frame: 3 |
| gi|31212729|ref|XP_315349.1| ENSANGP00000021019 [Anopheles gambiae] gi|21299258|gb|EAA11403.1| ENSANGP00000021019 [An... |
| Match: gi|41393508|gb|AAS02031.1| |
score: 148.7 |
e-value: 2.1e-34 |
Identity: 34.77% |
Span: 744bp (61.3%) |
Frame: 3 |
| gi|41393508|gb|AAS02031.1| unknown [Homo sapiens] |
| Match: gi|30584227|gb|AAP36362.1| |
score: 148.7 |
e-value: 2.1e-34 |
Identity: 34.77% |
Span: 744bp (61.3%) |
Frame: 3 |
| gi|30584227|gb|AAP36362.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, s... |
| Match: gi|21264353|ref|NP_003069.2| |
score: 148.7 |
e-value: 2.1e-34 |
Identity: 34.77% |
Span: 744bp (61.3%) |
Frame: 3 |
| gi|21264353|ref|NP_003069.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d3; Rsc6p; mamm... |
| Match: gi|40686120|gb|AAR88510.1| |
score: 148.7 |
e-value: 2.1e-34 |
Identity: 34.77% |
Span: 744bp (61.3%) |
Frame: 3 |
| gi|40686120|gb|AAR88510.1| 60kDa BRG-1/Brm associated factor subunit c isoform 2 [Homo sapiens] |
| Match: gi|48096705|ref|XP_394756.1| |
score: 148.3 |
e-value: 2.7e-34 |
Identity: 36.53% |
Span: 636bp (52.4%) |
Frame: 3 |
| gi|48096705|ref|XP_394756.1| similar to ENSANGP00000021019 [Apis mellifera] |
| Match: gi|34853976|ref|XP_216062.2| |
score: 147.9 |
e-value: 3.5e-34 |
Identity: 34.77% |
Span: 744bp (61.3%) |
Frame: 3 |
| gi|34853976|ref|XP_216062.2| similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d3; ... |
| Match: gi|47219716|emb|CAG12638.1| |
score: 147.5 |
e-value: 4.6e-34 |
Identity: 32.55% |
Span: 741bp (61.1%) |
Frame: 3 |
| gi|47219716|emb|CAG12638.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|38014750|gb|AAH60525.1| |
score: 147.5 |
e-value: 4.6e-34 |
Identity: 34.77% |
Span: 744bp (61.3%) |
Frame: 3 |
| gi|38014750|gb|AAH60525.1| Smarcd3 protein [Mus musculus] |
| Match: gi|2723484|dbj|BAA24105.1| |
score: 146 |
e-value: 1.3e-33 |
Identity: 32.95% |
Span: 756bp (62.3%) |
Frame: 3 |
| gi|2723484|dbj|BAA24105.1| BAF60b [Rattus norvegicus] |
| Match: gi|14010885|ref|NP_114189.1| |
score: 146 |
e-value: 1.3e-33 |
Identity: 32.95% |
Span: 756bp (62.3%) |
Frame: 3 |
| gi|14010885|ref|NP_114189.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d,... |
| Match: gi|7513920|pir||JC6508 |
score: 146 |
e-value: 1.3e-33 |
Identity: 32.95% |
Span: 756bp (62.3%) |
Frame: 3 |
| gi|7513920|pir||JC6508 brahma related gene associated factor BAF60 b protein - rat |
| Match: gi|13994211|ref|NP_114084.1| |
score: 145.6 |
e-value: 1.7e-33 |
Identity: 32.95% |
Span: 756bp (62.3%) |
Frame: 3 |
| gi|13994211|ref|NP_114084.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d,... |
| Match: gi|21264351|ref|NP_003068.2| |
score: 145.6 |
e-value: 1.7e-33 |
Identity: 32.95% |
Span: 756bp (62.3%) |
Frame: 3 |
| gi|21264351|ref|NP_003068.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d2; Rsc6p; mamm... |
| Match: gi|1549247|gb|AAC50697.1| |
score: 144.4 |
e-value: 3.9e-33 |
Identity: 34.3% |
Span: 705bp (58.1%) |
Frame: 3 |
| gi|1549247|gb|AAC50697.1| SWI/SNF complex 60 KDa subunit [Homo sapiens] |
| Match: gi|39589577|emb|CAE66812.1| |
score: 141.7 |
e-value: 2.5e-32 |
Identity: 36.27% |
Span: 576bp (47.5%) |
Frame: 3 |
| gi|39589577|emb|CAE66812.1| Hypothetical protein CBG12176 [Caenorhabditis briggsae] |
| Match: gi|31981140|ref|NP_080167.2| |
score: 141.4 |
e-value: 3.3e-32 |
Identity: 36.89% |
Span: 600bp (49.5%) |
Frame: 3 |
| gi|31981140|ref|NP_080167.2| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d,... |
| Match: gi|12836787|dbj|BAB23813.1| |
score: 141.4 |
e-value: 3.3e-32 |
Identity: 36.89% |
Span: 600bp (49.5%) |
Frame: 3 |
| gi|12836787|dbj|BAB23813.1| unnamed protein product [Mus musculus] |
| Match: gi|1549245|gb|AAC50696.1| |
score: 139 |
e-value: 1.6e-31 |
Identity: 34.88% |
Span: 612bp (50.5%) |
Frame: 3 |
| gi|1549245|gb|AAC50696.1| SWI/SNF complex 60 KDa subunit [Homo sapiens] |
| Match: gi|28828848|gb|AAO51443.1| |
score: 124.4 |
e-value: 4.1e-27 |
Identity: 32.35% |
Span: 579bp (47.7%) |
Frame: 3 |
| gi|28828848|gb|AAO51443.1| similar to putative protein; protein id: At5g14170.1, supported by cDNA: gi_17473639 [Arab... |
| Match: gi|19114022|ref|NP_593110.1| |
score: 102.1 |
e-value: 2.2e-20 |
Identity: 29.65% |
Span: 624bp (51.4%) |
Frame: 3 |
| gi|19114022|ref|NP_593110.1| similarity to mammalian swi/snf complex 60 kda subunit [Schizosaccharomyces pombe] gi|11... |
| Match: gi|49072568|ref|XP_400573.1| |
score: 97.44 |
e-value: 5.4e-19 |
Identity: 26.84% |
Span: 612bp (50.5%) |
Frame: 3 |
| gi|49072568|ref|XP_400573.1| hypothetical protein UM02958.1 [Ustilago maydis 521] >gi|46098897|gb|EAK84130.1| hypothe... |
| Match: gi|47217478|emb|CAG10247.1| |
score: 96.29 |
e-value: 1.2e-18 |
Identity: 24.82% |
Span: 624bp (51.4%) |
Frame: 3 |
| gi|47217478|emb|CAG10247.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|26344411|dbj|BAC35856.1| |
score: 90.51 |
e-value: 6.6e-17 |
Identity: 41.03% |
Span: 348bp (28.7%) |
Frame: 3 |
| gi|26344411|dbj|BAC35856.1| unnamed protein product [Mus musculus] |
| Match: gi|49093802|ref|XP_408362.1| |
score: 90.12 |
e-value: 8.7e-17 |
Identity: 26.9% |
Span: 723bp (59.6%) |
Frame: 3 |
| gi|49093802|ref|XP_408362.1| hypothetical protein AN4225.2 [Aspergillus nidulans FGSC A4] >gi|40740134|gb|EAA59324.1|... |
| Match: gi|46228283|gb|EAK89182.1| |
score: 87.81 |
e-value: 4.3e-16 |
Identity: 28.43% |
Span: 543bp (44.8%) |
Frame: 3 |
| gi|46228283|gb|EAK89182.1| RSC6/BAF60A ortholog with a SWIB domain [Cryptosporidium parvum] |
| Match: gi|46138419|ref|XP_390900.1| |
score: 85.89 |
e-value: 1.6e-15 |
Identity: 27.95% |
Span: 636bp (52.4%) |
Frame: 3 |
| gi|46138419|ref|XP_390900.1| hypothetical protein FG10724.1 [Gibberella zeae PH-1] >gi|42552138|gb|EAA74981.1| hypoth... |
| Match: gi|28881132|emb|CAD70303.1| |
score: 72.79 |
e-value: 1.4e-11 |
Identity: 27.68% |
Span: 543bp (44.8%) |
Frame: 3 |
| gi|28881132|emb|CAD70303.1| related to SWI/SNF complex 60 KDa subunit [Neurospora crassa] |
| Match: gi|32404434|ref|XP_322830.1| |
score: 67.78 |
e-value: 4.6e-10 |
Identity: 27.68% |
Span: 543bp (44.8%) |
Frame: 3 |
| gi|32404434|ref|XP_322830.1| hypothetical protein [Neurospora crassa] gi|28917052|gb|EAA26775.1| hypothetical protein... |
| Match: gi|46436387|gb|EAK95750.1| |
score: 61.23 |
e-value: 4.3e-08 |
Identity: 25.84% |
Span: 543bp (44.8%) |
Frame: 3 |
| gi|46436387|gb|EAK95750.1| hypothetical protein CaO19.9805 [Candida albicans SC5314] >gi|46436452|gb|EAK95814.1| hypo... |
| Match: gi|48425871|pdb|1V31|A |
score: 53.53 |
e-value: 9e-06 |
Identity: 71.88% |
Span: 96bp (7.9%) |
Frame: 3 |
| gi|48425871|pdb|1V31|A Chain A, Solution Structure Of The SwibMDM2 DOMAIN OF THE Hypothetical Protein At5g14170 From ... |
| Match: gi|6319900|ref|NP_009981.1| |
score: 50.83 |
e-value: 5.8e-05 |
Identity: 23.48% |
Span: 537bp (44.3%) |
Frame: 3 |
| gi|6319900|ref|NP_009981.1| a subunit of RSC, a fifteen-protein chromatin remodeling complex and related to the swi/s... |
| Match: gi|45184883|ref|NP_982601.1| |
score: 50.45 |
e-value: 7.6e-05 |
Identity: 22.27% |
Span: 564bp (46.5%) |
Frame: 3 |
| gi|45184883|ref|NP_982601.1| AAR060Cp [Eremothecium gossypii] >gi|44980492|gb|AAS50425.1| AAR060Cp [Eremothecium goss... |
| Match: gi|17550936|ref|NP_509971.1| |
score: 46.21 |
e-value: 0.001 |
Identity: 27.27% |
Span: 330bp (27.2%) |
Frame: 3 |
| gi|17550936|ref|NP_509971.1| SWI SNF-related matrix-associated actin-dependent regulator of chromatin family member (... |
|
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At5g14170.1 |
score: 384 |
e-value: 8e-107 |
Identity: 72.48% |
Span: 765bp (63.1%) |
Frame: 3 |
| At5g14170.1 68412.m01529 expressed protein contains similarity to unknown protein (gb|AAF03441.1) |
| Match: At3g01890.1 |
score: 284.3 |
e-value: 8.2e-77 |
Identity: 60.41% |
Span: 726bp (59.9%) |
Frame: 3 |
| At3g01890.1 68410.m00118 expressed protein similar to brahma associated protein GB:AAC28455 (Drosophila melanogaster)... |
|
