| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At2G44710.1 |
score: 336 |
e-value: 2e-92 |
Identity: 50.74% |
Span: 1167bp (93.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr2:18439977-18443704 FORWARD |
| Match: At4G00830.2 |
score: 103 |
e-value: 2e-22 |
Identity: 33.33% |
Span: 552bp (44.3%) |
Frame: 2 |
| RNA binding | chr4:352782-354965 FORWARD |
| Match: At4G00830.1 |
score: 103 |
e-value: 2e-22 |
Identity: 33.33% |
Span: 552bp (44.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:352782-354965 FORWARD |
| Match: At3G52660.2 |
score: 98.6 |
e-value: 7e-21 |
Identity: 30.43% |
Span: 552bp (44.3%) |
Frame: 2 |
| RNA binding | chr3:19533576-19535713 FORWARD |
| Match: At3G52660.1 |
score: 98.6 |
e-value: 7e-21 |
Identity: 30.43% |
Span: 552bp (44.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:19533576-19535713 FORWARD |
| Match: At2G47310.1 |
score: 74.7 |
e-value: 1e-13 |
Identity: 30% |
Span: 489bp (39.2%) |
Frame: 2 |
| flowering time control protein-related / FCA gamma-related | chr2:19430861-19433916 FORWARD |
| Match: At4G16280.2 |
score: 70.1 |
e-value: 3e-12 |
Identity: 28.41% |
Span: 489bp (39.2%) |
Frame: 2 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE |
| Match: At4G16280.3 |
score: 70.1 |
e-value: 3e-12 |
Identity: 28.41% |
Span: 489bp (39.2%) |
Frame: 2 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE |
| Match: At3G13224.2 |
score: 69.3 |
e-value: 4e-12 |
Identity: 33.79% |
Span: 399bp (32.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At3G13224.1 |
score: 69.3 |
e-value: 4e-12 |
Identity: 33.79% |
Span: 399bp (32.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At1G49760.1 |
score: 63.9 |
e-value: 2e-10 |
Identity: 25.17% |
Span: 429bp (34.4%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At5G06210.1 |
score: 59.3 |
e-value: 5e-09 |
Identity: 30.34% |
Span: 267bp (21.4%) |
Frame: 2 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At5G50250.1 |
score: 58.9 |
e-value: 6e-09 |
Identity: 22.89% |
Span: 456bp (36.6%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At3G46020.1 |
score: 58.2 |
e-value: 1e-08 |
Identity: 31.11% |
Span: 270bp (21.7%) |
Frame: 2 |
| RNA-binding protein, putative | chr3:16923496-16924235 REVERSE |
| Match: At1G71770.1 |
score: 57.4 |
e-value: 2e-08 |
Identity: 24.42% |
Span: 444bp (35.6%) |
Frame: 2 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At3G20930.1 |
score: 57 |
e-value: 2e-08 |
Identity: 38.03% |
Span: 213bp (17.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:7331745-7333755 FORWARD |
| Match: At1G76460.1 |
score: 57 |
e-value: 2e-08 |
Identity: 38.57% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:28691826-28693400 REVERSE |
| Match: At1G20880.1 |
score: 56.2 |
e-value: 4e-08 |
Identity: 37.14% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:7262868-7264823 REVERSE |
| Match: At4G19610.1 |
score: 56.2 |
e-value: 4e-08 |
Identity: 35% |
Span: 240bp (19.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:10677675-10681633 FORWARD |
| Match: At3G16380.1 |
score: 55.8 |
e-value: 5e-08 |
Identity: 25% |
Span: 453bp (36.4%) |
Frame: 2 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G71800.1 |
score: 55.5 |
e-value: 7e-08 |
Identity: 35.9% |
Span: 234bp (18.8%) |
Frame: 2 |
| cleavage stimulation factor, putative | chr1:27003268-27005512 FORWARD |
| Match: At2G46780.1 |
score: 55.1 |
e-value: 9e-08 |
Identity: 37.14% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr2:19236586-19238017 FORWARD |
| Match: At2G23350.1 |
score: 55.1 |
e-value: 9e-08 |
Identity: 25.81% |
Span: 429bp (34.4%) |
Frame: 2 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G74230.1 |
score: 55.1 |
e-value: 9e-08 |
Identity: 31.76% |
Span: 255bp (20.5%) |
Frame: 2 |
| Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
| Match: At2G37510.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 29.11% |
Span: 237bp (19.0%) |
Frame: 2 |
| RNA-binding protein, putative | chr2:15750190-15751582 REVERSE |
| Match: At3G54770.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 38.57% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:20284841-20286805 REVERSE |
| Match: At5G40490.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 27.97% |
Span: 399bp (32.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD |
| Match: At4G34110.1 |
score: 54.3 |
e-value: 1e-07 |
Identity: 24.16% |
Span: 462bp (37.1%) |
Frame: 2 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At3G23830.1 |
score: 53.9 |
e-value: 2e-07 |
Identity: 31.08% |
Span: 222bp (17.8%) |
Frame: 2 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At3G23830.2 |
score: 53.9 |
e-value: 2e-07 |
Identity: 31.08% |
Span: 222bp (17.8%) |
Frame: 2 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At5G09880.1 |
score: 53.5 |
e-value: 3e-07 |
Identity: 25.97% |
Span: 408bp (32.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:3081647-3085180 REVERSE |
| Match: At1G22910.1 |
score: 53.5 |
e-value: 3e-07 |
Identity: 35.71% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107648 FORWARD |
| Match: At3G16380.1 |
score: 53.5 |
e-value: 3e-07 |
Identity: 27.33% |
Span: 417bp (33.5%) |
Frame: 2 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G22910.2 |
score: 53.5 |
e-value: 3e-07 |
Identity: 35.71% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107607 FORWARD |
| Match: At1G22910.3 |
score: 53.5 |
e-value: 3e-07 |
Identity: 35.71% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107938 FORWARD |
| Match: At2G18510.1 |
score: 53.1 |
e-value: 3e-07 |
Identity: 26.97% |
Span: 435bp (34.9%) |
Frame: 2 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At5G61030.1 |
score: 53.1 |
e-value: 3e-07 |
Identity: 29.49% |
Span: 234bp (18.8%) |
Frame: 2 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At2G35410.1 |
score: 53.1 |
e-value: 3e-07 |
Identity: 23.76% |
Span: 483bp (38.8%) |
Frame: 2 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At2G27330.1 |
score: 53.1 |
e-value: 3e-07 |
Identity: 33.82% |
Span: 204bp (16.4%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr2:11702428-11703641 REVERSE |
| Match: At1G49760.1 |
score: 52.8 |
e-value: 4e-07 |
Identity: 24.58% |
Span: 465bp (37.3%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At5G47620.2 |
score: 52.8 |
e-value: 4e-07 |
Identity: 26.51% |
Span: 438bp (35.2%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At1G22760.1 |
score: 52.8 |
e-value: 4e-07 |
Identity: 25% |
Span: 444bp (35.6%) |
Frame: 2 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At3G52380.1 |
score: 52.8 |
e-value: 4e-07 |
Identity: 23.35% |
Span: 429bp (34.4%) |
Frame: 2 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At5G47620.1 |
score: 52.8 |
e-value: 4e-07 |
Identity: 26.51% |
Span: 438bp (35.2%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At3G47120.1 |
score: 52.4 |
e-value: 6e-07 |
Identity: 39.71% |
Span: 204bp (16.4%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:17362319-17363754 REVERSE |
| Match: At1G49760.1 |
score: 52 |
e-value: 7e-07 |
Identity: 24.69% |
Span: 450bp (36.1%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At4G24770.1 |
score: 51.6 |
e-value: 1e-06 |
Identity: 21.08% |
Span: 456bp (36.6%) |
Frame: 2 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At4G13850.1 |
score: 51.6 |
e-value: 1e-06 |
Identity: 26.92% |
Span: 234bp (18.8%) |
Frame: 2 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
| Match: At4G13850.2 |
score: 51.6 |
e-value: 1e-06 |
Identity: 26.92% |
Span: 234bp (18.8%) |
Frame: 2 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
| Match: At1G78260.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 34.29% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:29452210-29455074 FORWARD |
| Match: At1G78260.2 |
score: 51.2 |
e-value: 1e-06 |
Identity: 34.29% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:29452210-29454139 FORWARD |
| Match: At5G55550.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 25.45% |
Span: 417bp (33.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At5G55550.3 |
score: 51.2 |
e-value: 1e-06 |
Identity: 25.45% |
Span: 417bp (33.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.2 |
score: 51.2 |
e-value: 1e-06 |
Identity: 25.45% |
Span: 417bp (33.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At4G26650.2 |
score: 50.8 |
e-value: 2e-06 |
Identity: 24.4% |
Span: 417bp (33.5%) |
Frame: 2 |
| RNA binding | chr4:13445271-13447598 FORWARD |
| Match: At4G26650.1 |
score: 50.8 |
e-value: 2e-06 |
Identity: 24.4% |
Span: 417bp (33.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
| Match: At1G22330.1 |
score: 50.8 |
e-value: 2e-06 |
Identity: 34.29% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:7886682-7887571 FORWARD |
| Match: At1G07350.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 33.82% |
Span: 204bp (16.4%) |
Frame: 2 |
| transformer serine/arginine-rich ribonucleoprotein, putative | chr1:2257730-2260099 REVERSE |
| Match: At3G52150.2 |
score: 50.4 |
e-value: 2e-06 |
Identity: 23.17% |
Span: 429bp (34.4%) |
Frame: 2 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At1G47490.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 21.39% |
Span: 438bp (35.2%) |
Frame: 2 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At1G07350.2 |
score: 50.4 |
e-value: 2e-06 |
Identity: 33.82% |
Span: 204bp (16.4%) |
Frame: 2 |
| transformer serine/arginine-rich ribonucleoprotein, putative | chr1:2258814-2259584 REVERSE |
| Match: At3G52150.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 23.17% |
Span: 429bp (34.4%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At3G07810.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 25.81% |
Span: 399bp (32.0%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At3G07810.2 |
score: 50.1 |
e-value: 3e-06 |
Identity: 25.81% |
Span: 399bp (32.0%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At1G33470.2 |
score: 50.1 |
e-value: 3e-06 |
Identity: 32.86% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD |
| Match: At1G33470.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 32.86% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD |
| Match: At2G22100.1 |
score: 50.1 |
e-value: 3e-06 |
Identity: 41.43% |
Span: 210bp (16.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr2:9399477-9400625 REVERSE |
| Match: At1G47500.1 |
score: 49.7 |
e-value: 4e-06 |
Identity: 25.43% |
Span: 438bp (35.2%) |
Frame: 2 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At5G47320.1 |
score: 49.7 |
e-value: 4e-06 |
Identity: 26.92% |
Span: 234bp (18.8%) |
Frame: 2 |
| Symbols: RPS19 | RPS19 (40S ribosomal protein S19); RNA binding | chr5:19221028-19222178 FORWARD |
| Match: At4G03110.2 |
score: 49.7 |
e-value: 4e-06 |
Identity: 39.19% |
Span: 222bp (17.8%) |
Frame: 2 |
| RNA-binding protein, putative | chr4:1376710-1379275 REVERSE |
| Match: At4G03110.1 |
score: 49.7 |
e-value: 4e-06 |
Identity: 39.19% |
Span: 222bp (17.8%) |
Frame: 2 |
| RNA-binding protein, putative | chr4:1376612-1379275 REVERSE |
| Match: At4G19610.1 |
score: 49.7 |
e-value: 4e-06 |
Identity: 27.33% |
Span: 423bp (33.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:10677675-10681633 FORWARD |
| Match: At3G54230.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 46.43% |
Span: 168bp (13.5%) |
Frame: 2 |
| nucleic acid binding | chr3:20084850-20091120 FORWARD |
| Match: At5G54580.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 31.34% |
Span: 201bp (16.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22188558-22189882 FORWARD |
| Match: At5G04280.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 39.58% |
Span: 144bp (11.6%) |
Frame: 2 |
| glycine-rich RNA-binding protein | chr5:1192462-1195414 FORWARD |
| Match: At2G22090.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 41.79% |
Span: 201bp (16.1%) |
Frame: 2 |
| Symbols: UBA1A | UBA1A; AU-specific RNA binding / RNA binding | chr2:9395651-9397530 REVERSE |
| Match: At1G49600.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 43.08% |
Span: 195bp (15.7%) |
Frame: 2 |
| Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE... |
| Match: At2G22090.2 |
score: 49.3 |
e-value: 5e-06 |
Identity: 41.79% |
Span: 201bp (16.1%) |
Frame: 2 |
| Symbols: UBA1A | UBA1A; RNA binding | chr2:9396487-9397530 REVERSE |
| Match: At1G73530.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 31.88% |
Span: 207bp (16.6%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:27647462-27649047 REVERSE |
| Match: At4G39260.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 26.58% |
Span: 237bp (19.0%) |
Frame: 2 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At4G39260.2 |
score: 48.9 |
e-value: 6e-06 |
Identity: 26.58% |
Span: 237bp (19.0%) |
Frame: 2 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At4G27000.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 39.44% |
Span: 213bp (17.1%) |
Frame: 2 |
| RNA-binding protein 45 (RBP45), putative | chr4:13554989-13557769 REVERSE |
| Match: At5G53680.1 |
score: 48.9 |
e-value: 6e-06 |
Identity: 34.78% |
Span: 207bp (16.6%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:21815608-21816335 FORWARD |
| Match: At4G39260.3 |
score: 48.9 |
e-value: 6e-06 |
Identity: 26.58% |
Span: 237bp (19.0%) |
Frame: 2 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At1G47500.1 |
score: 48.1 |
e-value: 1e-05 |
Identity: 42.03% |
Span: 207bp (16.6%) |
Frame: 2 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At2G23350.1 |
score: 47.4 |
e-value: 2e-05 |
Identity: 24.7% |
Span: 426bp (34.2%) |
Frame: 2 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G47490.1 |
score: 47 |
e-value: 2e-05 |
Identity: 40.58% |
Span: 207bp (16.6%) |
Frame: 2 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At3G52150.2 |
score: 46.6 |
e-value: 3e-05 |
Identity: 28% |
Span: 225bp (18.1%) |
Frame: 2 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At3G52150.1 |
score: 46.6 |
e-value: 3e-05 |
Identity: 28% |
Span: 225bp (18.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At4G16280.2 |
score: 46.2 |
e-value: 4e-05 |
Identity: 33.9% |
Span: 177bp (14.2%) |
Frame: 2 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE |
| Match: At4G16280.3 |
score: 46.2 |
e-value: 4e-05 |
Identity: 33.9% |
Span: 177bp (14.2%) |
Frame: 2 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE |
| Match: At3G13224.2 |
score: 45.8 |
e-value: 5e-05 |
Identity: 34.55% |
Span: 165bp (13.2%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At5G47620.1 |
score: 45.8 |
e-value: 5e-05 |
Identity: 31.25% |
Span: 240bp (19.3%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At5G47620.2 |
score: 45.8 |
e-value: 5e-05 |
Identity: 31.25% |
Span: 240bp (19.3%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At3G13224.1 |
score: 45.8 |
e-value: 5e-05 |
Identity: 34.55% |
Span: 165bp (13.2%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At4G24770.1 |
score: 45.8 |
e-value: 5e-05 |
Identity: 25.32% |
Span: 237bp (19.0%) |
Frame: 2 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At3G07810.2 |
score: 44.7 |
e-value: 0.0001 |
Identity: 33.78% |
Span: 219bp (17.6%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At3G07810.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 33.78% |
Span: 219bp (17.6%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At2G44710.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 25.14% |
Span: 474bp (38.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr2:18439977-18443704 FORWARD |
| Match: At4G27000.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 25.19% |
Span: 318bp (25.5%) |
Frame: 2 |
| RNA-binding protein 45 (RBP45), putative | chr4:13554989-13557769 REVERSE |
|
| 147 lower scoring hits censored -- only 100 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|37359248|gb|AAN77868.1| |
score: 343 |
e-value: 7e-93 |
Identity: 86.6% |
Span: 582bp (46.7%) |
Frame: 2 |
| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera] |
| Match: gi|110740397|dbj|BAF02093.1| |
score: 336 |
e-value: 2e-90 |
Identity: 50.74% |
Span: 1167bp (93.7%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|30689808|ref|NP_850422.1| |
score: 336 |
e-value: 2e-90 |
Identity: 50.74% |
Span: 1167bp (93.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20147226|gb|AAM10328.1| At2g44720/F16B22.21 ... |
| Match: gi|50927259|ref|XP_473377.1| |
score: 315 |
e-value: 2e-84 |
Identity: 51.92% |
Span: 1167bp (93.7%) |
Frame: 2 |
| gi|50927259|ref|XP_473377.1| OSJNBb0103I08.18 [Oryza sativa (japonica cultivar-group)] >gi|38345949|emb|CAE04337.2| O... |
| Match: gi|92888348|gb|ABE89366.1| |
score: 250 |
e-value: 8e-65 |
Identity: 62.5% |
Span: 573bp (46.0%) |
Frame: 2 |
| RNA |
| Match: gi|50936809|ref|XP_477932.1| |
score: 178 |
e-value: 4e-43 |
Identity: 46.35% |
Span: 573bp (46.0%) |
Frame: 2 |
| gi|50936809|ref|XP_477932.1| water-stress protein-like protein [Oryza sativa (japonica cultivar-group)] >gi|34395354|... |
| Match: gi|50934673|ref|XP_476864.1| |
score: 168 |
e-value: 5e-40 |
Identity: 45.88% |
Span: 582bp (46.7%) |
Frame: 2 |
| gi|50934673|ref|XP_476864.1| putative RRM RNA binding protein NSAP1 [Oryza sativa (japonica cultivar-group)] >gi|3439... |
| Match: gi|3341691|gb|AAC27473.1| |
score: 133 |
e-value: 2e-29 |
Identity: 37.46% |
Span: 813bp (65.2%) |
Frame: 2 |
| putative heterogeneous nuclear ribonucleoprotein [Arabidopsis thaliana] |
| Match: gi|109485130|ref|XP_001065902.1| |
score: 106 |
e-value: 3e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|47122815|gb|AAH70529.1| |
score: 105 |
e-value: 3e-21 |
Identity: 36.36% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|47122815|gb|AAH70529.1| Unknown (protein for MGC:78820) [Xenopus laevis] |
| Match: gi|15986735|gb|AAL11726.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|15986735|gb|AAL11726.1| RRM RNA binding protein NSAP1 [Mus musculus] |
| Match: gi|109071931|ref|XP_001088952.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|29788787|ref|NP_062770.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|29788787|ref|NP_062770.1| NS1-associated protein 1; synaptotagmin-binding, cytoplasmic RNA-interacting protein; RR... |
| Match: gi|27370721|gb|AAH41148.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|27370721|gb|AAH41148.1| Nsap1-pending protein [Mus musculus] |
| Match: gi|109071943|ref|XP_001088618.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|26347007|dbj|BAC37152.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|26347007|dbj|BAC37152.1| unnamed protein product [Mus musculus] |
| Match: gi|109071953|ref|XP_001088849.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|37589144|gb|AAH58807.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|37589144|gb|AAH58807.1| Nsap1-pending protein [Mus musculus] |
| Match: gi|109071947|ref|XP_001089415.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|33416526|gb|AAH55863.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|33416526|gb|AAH55863.1| Nsap1l-pending protein [Mus musculus] |
| Match: gi|109071941|ref|XP_001088724.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|73973886|ref|XP_532223.2| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|73973886|ref|XP_532223.2| PREDICTED: similar to NS1-associated protein 1 isoform 2 [Canis familiaris] |
| Match: gi|82568969|gb|AAI08364.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| Unknown |
| Match: gi|109483772|ref|XP_343447.3| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|5031512|gb|AAD38198.1| |
score: 105 |
e-value: 4e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|5031512|gb|AAD38198.1| NSAP1 protein [Homo sapiens] |
| Match: gi|51329959|gb|AAH80309.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|51329959|gb|AAH80309.1| NS1-associated protein 1 [Mus musculus] >gi|6576815|dbj|BAA88342.1| SYNCRIP [Mus musculus] |
| Match: gi|62087776|dbj|BAD92335.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|62087776|dbj|BAD92335.1| synaptotagmin binding, cytoplasmic RNA interacting protein variant [Homo sapiens] |
| Match: gi|33874520|gb|AAH15575.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|33874520|gb|AAH15575.1| NSAP1 protein [Homo sapiens] |
| Match: gi|33086582|gb|AAP92603.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|33086582|gb|AAP92603.1| Ab2-339 [Rattus norvegicus] |
| Match: gi|44888326|sp|Q7TMK9|HNRPQ_MOUSE |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|44888326|sp|Q7TMK9|HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q) (Synaptotagmin bindin... |
| Match: gi|77549578|gb|ABA92375.1| |
score: 105 |
e-value: 6e-21 |
Identity: 36.02% |
Span: 552bp (44.3%) |
Frame: 2 |
| gi|77549578|gb|ABA92375.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa (japonica ... |
| Match: gi|55627020|ref|XP_518621.1| |
score: 105 |
e-value: 6e-21 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|55627020|ref|XP_518621.1| PREDICTED: similar to Syncrip protein [Pan troglodytes] |
| Match: gi|29747829|gb|AAH50079.1| |
score: 103 |
e-value: 1e-20 |
Identity: 35.83% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|29747829|gb|AAH50079.1| Nsap1-pending protein [Mus musculus] |
| Match: gi|47212367|emb|CAF89932.1| |
score: 103 |
e-value: 2e-20 |
Identity: 35.45% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|47212367|emb|CAF89932.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|18411454|ref|NP_567192.1| |
score: 103 |
e-value: 2e-20 |
Identity: 33.33% |
Span: 552bp (44.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79324963|ref|NP_001031566.1| RNA recognition... |
| Match: gi|109071951|ref|XP_001089067.1| |
score: 103 |
e-value: 1e-20 |
Identity: 34.92% |
Span: 561bp (45.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|46249711|gb|AAH68373.1| |
score: 103 |
e-value: 2e-20 |
Identity: 35.98% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|46249711|gb|AAH68373.1| Synaptotagmin binding, cytoplasmic RNA interacting protein [Danio rerio] >gi|34784487|gb|A... |
| Match: gi|22655529|gb|AAN04093.1| |
score: 103 |
e-value: 2e-20 |
Identity: 68% |
Span: 225bp (18.1%) |
Frame: 2 |
| gi|22655529|gb|AAN04093.1| water-stress protein [Zea mays] |
| Match: gi|109071939|ref|XP_001088395.1| |
score: 103 |
e-value: 1e-20 |
Identity: 35.29% |
Span: 555bp (44.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|15809590|gb|AAK59705.1| |
score: 102 |
e-value: 3e-20 |
Identity: 35.29% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|15809590|gb|AAK59705.1| hnRNP Q1 [Homo sapiens] |
| Match: gi|23397427|ref|NP_006363.3| |
score: 102 |
e-value: 3e-20 |
Identity: 35.29% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|23397427|ref|NP_006363.3| NS1-associated protein 1 [Homo sapiens] gi|3037013|gb|AAC12926.1| Gry-rbp [Homo sapiens]... |
| Match: gi|92897076|gb|ABE93532.1| |
score: 102 |
e-value: 3e-20 |
Identity: 30.11% |
Span: 552bp (44.3%) |
Frame: 2 |
| RNA-binding |
| Match: gi|37681889|gb|AAQ97822.1| |
score: 102 |
e-value: 3e-20 |
Identity: 34.76% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|37681889|gb|AAQ97822.1| NS1-associated protein 1 [Danio rerio] |
| Match: gi|46362505|gb|AAH66570.1| |
score: 102 |
e-value: 3e-20 |
Identity: 34.76% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|46362505|gb|AAH66570.1| NS1-associated protein 1 [Danio rerio] |
| Match: gi|28422490|gb|AAH46902.1| |
score: 100 |
e-value: 2e-19 |
Identity: 34.22% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|28422490|gb|AAH46902.1| Similar to NS1-associated protein 1 [Danio rerio] |
| Match: gi|26454828|gb|AAH40844.1| |
score: 100 |
e-value: 1e-19 |
Identity: 34.76% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|26454828|gb|AAH40844.1| NSAP1 protein [Homo sapiens] |
| Match: gi|47219493|emb|CAG10857.1| |
score: 99.8 |
e-value: 2e-19 |
Identity: 31.22% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|47219493|emb|CAG10857.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|13435603|gb|AAH04679.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|13435603|gb|AAH04679.1| Hnrpr protein [Mus musculus] |
| Match: gi|76611467|ref|XP_885447.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|76611467|ref|XP_885447.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein R isoform 6 [Bos taurus] >... |
| Match: gi|33859724|ref|NP_083147.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|33859724|ref|NP_083147.1| heterogeneous nuclear ribonucleoprotein R [Mus musculus] gi|17066599|gb|AAL35332.1| hete... |
| Match: gi|5031755|ref|NP_005817.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|5031755|ref|NP_005817.1| heterogeneous nuclear ribonucleoprotein R [Homo sapiens] gi|12230547|sp|O43390|ROR_HUMAN ... |
| Match: gi|74207436|dbj|BAE30898.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|74207436|dbj|BAE30898.1| unnamed protein product [Mus musculus] |
| Match: gi|74228775|dbj|BAE21877.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|74228775|dbj|BAE21877.1| unnamed protein product [Mus musculus] |
| Match: gi|108999072|ref|XP_001111802.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|74141454|dbj|BAB27533.3| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|74141454|dbj|BAB27533.3| unnamed protein product [Mus musculus] |
| Match: gi|55732180|emb|CAH92794.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|55732180|emb|CAH92794.1| hypothetical protein [Pongo pygmaeus] |
| Match: gi|74194838|dbj|BAE26010.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|74194838|dbj|BAE26010.1| unnamed protein product [Mus musculus] |
| Match: gi|55586435|ref|XP_513191.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|55586435|ref|XP_513191.1| PREDICTED: similar to hypothetical protein [Pan troglodytes] |
| Match: gi|111494085|gb|AAI10390.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| Unknown |
| Match: gi|74219109|dbj|BAE26696.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|74219109|dbj|BAE26696.1| unnamed protein product [Mus musculus] |
| Match: gi|62471548|gb|AAH93598.1| |
score: 99 |
e-value: 4e-19 |
Identity: 33.33% |
Span: 561bp (45.0%) |
Frame: 2 |
| Heterogeneous |
| Match: gi|15231284|ref|NP_190834.1| |
score: 98.6 |
e-value: 5e-19 |
Identity: 30.43% |
Span: 552bp (44.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79314840|ref|NP_001030849.1| RNA recognition... |
| Match: gi|62122943|ref|NP_001006309.2| |
score: 98.6 |
e-value: 5e-19 |
Identity: 32.8% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|62122943|ref|NP_001006309.2| heterogeneous nuclear ribonucleoprotein R [Gallus gallus] |
| Match: gi|78707790|gb|ABB46765.1| |
score: 98.6 |
e-value: 5e-19 |
Identity: 35.26% |
Span: 552bp (44.3%) |
Frame: 2 |
| gi|78707790|gb|ABB46765.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa (japonica ... |
| Match: gi|37531112|ref|NP_919858.1| |
score: 98.6 |
e-value: 5e-19 |
Identity: 35.26% |
Span: 552bp (44.3%) |
Frame: 2 |
| gi|37531112|ref|NP_919858.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|18425248|gb|AAL... |
| Match: gi|13242328|ref|NP_062640.1| |
score: 98.2 |
e-value: 7e-19 |
Identity: 34.74% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|13242328|ref|NP_062640.1| NS1-associated protein 1-like; RRM RNA binding protein GRY-RBP [Mus musculus] gi|3694986... |
| Match: gi|12655185|gb|AAH01449.1| |
score: 97.8 |
e-value: 9e-19 |
Identity: 32.98% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|12655185|gb|AAH01449.1| HNRPR protein [Homo sapiens] |
| Match: gi|89272515|emb|CAJ81560.1| |
score: 97.8 |
e-value: 9e-19 |
Identity: 33.69% |
Span: 555bp (44.5%) |
Frame: 2 |
| heterogeneous |
| Match: gi|73950236|ref|XP_866562.1| |
score: 97.8 |
e-value: 9e-19 |
Identity: 32.46% |
Span: 567bp (45.5%) |
Frame: 2 |
| gi|73950236|ref|XP_866562.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein R isoform 7 [Canis familia... |
| Match: gi|34365228|emb|CAE45953.1| |
score: 97.8 |
e-value: 9e-19 |
Identity: 32.98% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|34365228|emb|CAE45953.1| hypothetical protein [Homo sapiens] |
| Match: gi|76611465|ref|XP_885422.1| |
score: 97.8 |
e-value: 9e-19 |
Identity: 32.46% |
Span: 567bp (45.5%) |
Frame: 2 |
| gi|76611465|ref|XP_885422.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein R isoform 5 [Bos taurus] >... |
| Match: gi|27903509|gb|AAO24773.1| |
score: 97.4 |
e-value: 1e-18 |
Identity: 32.8% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|27903509|gb|AAO24773.1| heterogeneous nuclear ribonucleoprotein R [Rattus norvegicus] |
| Match: gi|55233929|gb|EAA43191.2| |
score: 97.1 |
e-value: 2e-18 |
Identity: 34.76% |
Span: 552bp (44.3%) |
Frame: 2 |
| gi|55233929|gb|EAA43191.2| ENSANGP00000023817 [Anopheles gambiae str. PEST] >gi|58396167|ref|XP_321712.2| ENSANGP0000... |
| Match: gi|27462520|gb|AAO15466.1| |
score: 95.1 |
e-value: 6e-18 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|27462520|gb|AAO15466.1| APOBEC-1 complementation factor 45 kDa variant [Rattus norvegicus] |
| Match: gi|15072439|gb|AAK50145.1| |
score: 95.1 |
e-value: 6e-18 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|15072439|gb|AAK50145.1| APOBEC-1 complementation factor long isoform [Rattus norvegicus] |
| Match: gi|27462518|gb|AAO15465.1| |
score: 95.1 |
e-value: 6e-18 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|27462518|gb|AAO15465.1| APOBEC-1 complementation factor 43 kDa variant [Rattus norvegicus] |
| Match: gi|68354364|ref|XP_691446.1| |
score: 95.1 |
e-value: 6e-18 |
Identity: 34.57% |
Span: 558bp (44.8%) |
Frame: 2 |
| gi|68354364|ref|XP_691446.1| PREDICTED: similar to CG17838-PE, isoform E [Danio rerio] |
| Match: gi|72086008|ref|XP_793277.1| |
score: 95.1 |
e-value: 6e-18 |
Identity: 31.72% |
Span: 555bp (44.5%) |
Frame: 2 |
| gi|72086008|ref|XP_793277.1| PREDICTED: similar to CG17838-PA, isoform A [Strongylocentrotus purpuratus] |
| Match: gi|76680793|ref|XP_869839.1| |
score: 95.1 |
e-value: 6e-18 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|76680793|ref|XP_869839.1| PREDICTED: similar to apobec-1 complementation factor, partial [Bos taurus] |
| Match: gi|19173760|ref|NP_596891.1| |
score: 95.1 |
e-value: 6e-18 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|19173760|ref|NP_596891.1| Apobec-1 complementation factor, APOBEC-1 stimulating protein [Rattus norvegicus] gi|150... |
| Match: gi|73995985|ref|XP_861026.1| |
score: 94.7 |
e-value: 8e-18 |
Identity: 32.8% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|73995985|ref|XP_861026.1| PREDICTED: similar to apobec-1 complementation factor isoform 1 isoform 3 [Canis familia... |
| Match: gi|73995983|ref|XP_534776.2| |
score: 94.7 |
e-value: 8e-18 |
Identity: 32.8% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|73995983|ref|XP_534776.2| PREDICTED: similar to apobec-1 complementation factor isoform 2 isoform 1 [Canis familia... |
| Match: gi|47209668|emb|CAF95095.1| |
score: 94.4 |
e-value: 1e-17 |
Identity: 34.95% |
Span: 552bp (44.3%) |
Frame: 2 |
| gi|47209668|emb|CAF95095.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|55729715|emb|CAH91586.1| |
score: 94.4 |
e-value: 1e-17 |
Identity: 32.8% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|55729715|emb|CAH91586.1| hypothetical protein [Pongo pygmaeus] |
| Match: gi|109089795|ref|XP_001100414.1| |
score: 94.4 |
e-value: 1e-17 |
Identity: 32.8% |
Span: 561bp (45.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|109089791|ref|XP_001100239.1| |
score: 94.4 |
e-value: 1e-17 |
Identity: 32.8% |
Span: 561bp (45.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|87241499|gb|ABD33357.1| |
score: 94 |
e-value: 1e-17 |
Identity: 29.35% |
Span: 552bp (44.3%) |
Frame: 2 |
| RNA-binding |
| Match: gi|68369596|ref|XP_685178.1| |
score: 93.6 |
e-value: 2e-17 |
Identity: 33.33% |
Span: 552bp (44.3%) |
Frame: 2 |
| gi|68369596|ref|XP_685178.1| PREDICTED: similar to apobec-1 complementation factor isoform 2 isoform 1 [Danio rerio] |
| Match: gi|94406662|ref|XP_001002672.1| |
score: 93.6 |
e-value: 2e-17 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|68369598|ref|XP_707799.1| |
score: 93.6 |
e-value: 2e-17 |
Identity: 33.33% |
Span: 552bp (44.3%) |
Frame: 2 |
| gi|68369598|ref|XP_707799.1| PREDICTED: similar to apobec-1 complementation factor isoform 1 isoform 2 [Danio rerio] |
| Match: gi|94406666|ref|XP_001002678.1| |
score: 93.6 |
e-value: 2e-17 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|58477316|gb|AAH89622.1| |
score: 93.6 |
e-value: 2e-17 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|58477316|gb|AAH89622.1| 1810073H04Rik protein [Mus musculus] |
| Match: gi|50346317|gb|AAT74917.1| |
score: 92.4 |
e-value: 4e-17 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|50346317|gb|AAT74917.1| APOBEC-1 stimulating protein [Mus musculus] |
| Match: gi|50346319|gb|AAT74918.1| |
score: 92.4 |
e-value: 4e-17 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|50346319|gb|AAT74918.1| truncated APOBEC-1 stimulating protein [Mus musculus] |
| Match: gi|50346315|gb|AAT74916.1| |
score: 92.4 |
e-value: 4e-17 |
Identity: 32.28% |
Span: 561bp (45.0%) |
Frame: 2 |
| gi|50346315|gb|AAT74916.1| APOBEC-1 stimulating protein [Mus musculus] |
| Match: gi|21356139|ref|NP_650913.1| |
score: 92 |
e-value: 5e-17 |
Identity: 32.8% |
Span: 552bp (44.3%) |
Frame: 2 |
| gi|21356139|ref|NP_650913.1| CG17838-PB [Drosophila melanogaster] gi|16197897|gb|AAL13706.1| GH28335p [Drosophila mel... |
| Match: gi|110756254|ref|XP_392307.3| |
score: 91.7 |
e-value: 7e-17 |
Identity: 33.33% |
Span: 552bp (44.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|87241499|gb|ABD33357.1| |
score: 57.4 |
e-value: 1e-06 |
Identity: 25.9% |
Span: 456bp (36.6%) |
Frame: 2 |
| RNA-binding |
| Match: gi|77549578|gb|ABA92375.1| |
score: 53.1 |
e-value: 3e-05 |
Identity: 27.33% |
Span: 435bp (34.9%) |
Frame: 2 |
| gi|77549578|gb|ABA92375.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa (japonica ... |
| Match: gi|21356139|ref|NP_650913.1| |
score: 51.2 |
e-value: 0.0001 |
Identity: 25.15% |
Span: 444bp (35.6%) |
Frame: 2 |
| gi|21356139|ref|NP_650913.1| CG17838-PB [Drosophila melanogaster] gi|16197897|gb|AAL13706.1| GH28335p [Drosophila mel... |
|
| 194 lower scoring hits censored -- only 100 best hits are stored. |
