genbank/nr [blastx] | Showing best 100 hits recorded |
Match: gi|147853033|emb|CAN81258.1| |
score: 292 |
e-value: 4e-77 |
Identity: 80.85% |
Span: 564bp (45.2%) |
Frame: 1 |
hypothetical protein [Vitis vinifera] |
Match: gi|157350066|emb|CAO40004.1| |
score: 292 |
e-value: 4e-77 |
Identity: 80.85% |
Span: 564bp (45.2%) |
Frame: 1 |
unnamed |
Match: gi|148909953|gb|ABR18062.1| |
score: 280 |
e-value: 1e-73 |
Identity: 80.75% |
Span: 561bp (45.0%) |
Frame: 1 |
unknown [Picea sitchensis] |
Match: gi|147855944|emb|CAN80749.1| |
score: 273 |
e-value: 3e-71 |
Identity: 75.53% |
Span: 564bp (45.2%) |
Frame: 1 |
hypothetical protein [Vitis vinifera] |
Match: gi|218196647|gb|EEC79074.1| |
score: 268 |
e-value: 6e-70 |
Identity: 71.35% |
Span: 573bp (46.0%) |
Frame: 1 |
hypothetical protein OsI_19658 [Oryza sativa Indica Group] |
Match: gi|33146854|dbj|BAC79849.1| |
score: 268 |
e-value: 1e-69 |
Identity: 76.56% |
Span: 573bp (46.0%) |
Frame: 1 |
putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group] |
Match: gi|115474019|ref|NP_001060608.1| |
score: 266 |
e-value: 3e-69 |
Identity: 77.01% |
Span: 561bp (45.0%) |
Frame: 1 |
Os07g0673500 [Oryza sativa (japonica cultivar-group)] >gi113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonic... |
Match: gi|52140006|gb|AAU29329.1| |
score: 266 |
e-value: 4e-69 |
Identity: 78.07% |
Span: 561bp (45.0%) |
Frame: 1 |
ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] |
Match: gi|215741122|dbj|BAG97617.1| |
score: 266 |
e-value: 3e-69 |
Identity: 77.01% |
Span: 561bp (45.0%) |
Frame: 1 |
unnamed protein product [Oryza sativa Japonica Group] |
Match: gi|219363191|ref|NP_001137034.1| |
score: 266 |
e-value: 4e-69 |
Identity: 78.07% |
Span: 561bp (45.0%) |
Frame: 1 |
hypothetical protein LOC100217203 [Zea mays] >gi52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [... |
Match: gi|30678391|ref|NP_850933.1| |
score: 265 |
e-value: 8e-69 |
Identity: 71.13% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|30678391|ref|NP_850933.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|30678398|ref|NP_563... |
Match: gi|108708090|gb|ABF95885.1| |
score: 265 |
e-value: 6e-69 |
Identity: 75.94% |
Span: 561bp (45.0%) |
Frame: 1 |
Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] |
Match: gi|125593961|gb|EAZ34020.1| |
score: 265 |
e-value: 8e-69 |
Identity: 71.12% |
Span: 561bp (45.0%) |
Frame: 1 |
hypothetical |
Match: gi|108708089|gb|ABF95884.1| |
score: 265 |
e-value: 6e-69 |
Identity: 75.94% |
Span: 561bp (45.0%) |
Frame: 1 |
Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi215692748|dbj|BAG88168.... |
Match: gi|2443473|gb|AAB71386.1| |
score: 265 |
e-value: 8e-69 |
Identity: 71.13% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] |
Match: gi|30678395|ref|NP_850934.1| |
score: 265 |
e-value: 8e-69 |
Identity: 71.13% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|22135918|gb|AAM9154... |
Match: gi|115452963|ref|NP_001050082.1| |
score: 265 |
e-value: 6e-69 |
Identity: 75.94% |
Span: 561bp (45.0%) |
Frame: 1 |
Os03g0344100 [Oryza sativa (japonica cultivar-group)] >gi113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonic... |
Match: gi|115463447|ref|NP_001055323.1| |
score: 265 |
e-value: 8e-69 |
Identity: 71.12% |
Span: 561bp (45.0%) |
Frame: 1 |
Os05g0364600 |
Match: gi|68037673|gb|AAY84884.1| |
score: 264 |
e-value: 1e-68 |
Identity: 76.34% |
Span: 558bp (44.7%) |
Frame: 1 |
alternative splicing regulator [Triticum aestivum] |
Match: gi|5815238|gb|AAD52612.1| |
score: 263 |
e-value: 2e-68 |
Identity: 69.19% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana] |
Match: gi|5815235|gb|AAD52609.1|AF173640_1 |
score: 263 |
e-value: 2e-68 |
Identity: 69.19% |
Span: 564bp (45.2%) |
Frame: 1 |
splicing |
Match: gi|5815239|gb|AAD52613.1| |
score: 263 |
e-value: 2e-68 |
Identity: 69.19% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana] |
Match: gi|5815237|gb|AAD52611.1| |
score: 263 |
e-value: 2e-68 |
Identity: 69.19% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana] |
Match: gi|5815236|gb|AAD52610.1| |
score: 263 |
e-value: 2e-68 |
Identity: 69.19% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana] |
Match: gi|217073712|gb|ACJ85216.1| |
score: 263 |
e-value: 3e-68 |
Identity: 78.07% |
Span: 561bp (45.0%) |
Frame: 1 |
unknown [Medicago truncatula] |
Match: gi|195639150|gb|ACG39043.1| |
score: 262 |
e-value: 4e-68 |
Identity: 73.82% |
Span: 570bp (45.7%) |
Frame: 1 |
pre-mRNA-splicing |
Match: gi|194696448|gb|ACF82308.1| |
score: 262 |
e-value: 4e-68 |
Identity: 73.82% |
Span: 570bp (45.7%) |
Frame: 1 |
unknown [Zea mays] |
Match: gi|52140010|gb|AAU29332.1| |
score: 261 |
e-value: 7e-68 |
Identity: 73.8% |
Span: 561bp (45.0%) |
Frame: 1 |
ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays] |
Match: gi|52140009|gb|AAU29331.1| |
score: 261 |
e-value: 7e-68 |
Identity: 73.8% |
Span: 561bp (45.0%) |
Frame: 1 |
ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays] |
Match: gi|55792397|gb|AAV65309.1| |
score: 260 |
e-value: 2e-67 |
Identity: 73.66% |
Span: 558bp (44.7%) |
Frame: 1 |
splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare] |
Match: gi|148908052|gb|ABR17145.1| |
score: 259 |
e-value: 3e-67 |
Identity: 69.84% |
Span: 561bp (45.0%) |
Frame: 1 |
unknown [Picea sitchensis] |
Match: gi|218188085|gb|EEC70512.1| |
score: 258 |
e-value: 6e-67 |
Identity: 72.22% |
Span: 588bp (47.2%) |
Frame: 1 |
hypothetical protein OsI_01613 [Oryza sativa Indica Group] |
Match: gi|52140012|gb|AAU29333.1| |
score: 256 |
e-value: 4e-66 |
Identity: 68.98% |
Span: 561bp (45.0%) |
Frame: 1 |
gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays] |
Match: gi|52140015|gb|AAU29336.1| |
score: 256 |
e-value: 4e-66 |
Identity: 68.98% |
Span: 561bp (45.0%) |
Frame: 1 |
gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays] |
Match: gi|52140013|gb|AAU29334.1| |
score: 256 |
e-value: 4e-66 |
Identity: 68.98% |
Span: 561bp (45.0%) |
Frame: 1 |
gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays] |
Match: gi|168043399|ref|XP_001774172.1| |
score: 255 |
e-value: 7e-66 |
Identity: 73.91% |
Span: 552bp (44.3%) |
Frame: 1 |
predicted protein [Physcomitrella patens subsp. patens] >gi162674440|gb|EDQ60948.1| predicted protein [Physcomitrella... |
Match: gi|168000741|ref|XP_001753074.1| |
score: 254 |
e-value: 1e-65 |
Identity: 71.57% |
Span: 552bp (44.3%) |
Frame: 1 |
predicted protein [Physcomitrella patens subsp. patens] >gi162695773|gb|EDQ82115.1| predicted protein [Physcomitrella... |
Match: gi|166844|gb|AAA32856.1| |
score: 254 |
e-value: 8e-66 |
Identity: 69.07% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|166844|gb|AAA32856.1| ribonucleoprotein >gi|1582992|prf||2119375A Ser/Arg-rich protein |
Match: gi|30679143|ref|NP_567235.3| |
score: 254 |
e-value: 8e-66 |
Identity: 72.82% |
Span: 564bp (45.2%) |
Frame: 1 |
gi|30679143|ref|NP_567235.3| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] |
Match: gi|168009612|ref|XP_001757499.1| |
score: 253 |
e-value: 2e-65 |
Identity: 72.31% |
Span: 552bp (44.3%) |
Frame: 1 |
predicted protein [Physcomitrella patens subsp. patens] >gi162691193|gb|EDQ77556.1| predicted protein [Physcomitrella... |
Match: gi|125586218|gb|EAZ26882.1| |
score: 253 |
e-value: 3e-65 |
Identity: 72.38% |
Span: 543bp (43.5%) |
Frame: 1 |
hypothetical |
Match: gi|79582138|ref|NP_683288.2| |
score: 252 |
e-value: 4e-65 |
Identity: 68.62% |
Span: 564bp (45.2%) |
Frame: 1 |
SF2/ASF-like splicing modulator (SRP30) [Arabidopsis thaliana] >gi4775271|emb|CAB42558.1| SF2/ASF-like splicing modul... |
Match: gi|42561847|ref|NP_172386.3| |
score: 252 |
e-value: 4e-65 |
Identity: 68.62% |
Span: 564bp (45.2%) |
Frame: 1 |
SF2/ASF-like splicing modulator (SRP30) [Arabidopsis thaliana] >gi4775270|emb|CAB42557.1| SF2/ASF-like splicing modul... |
Match: gi|3249109|gb|AAC24092.1| |
score: 252 |
e-value: 4e-65 |
Identity: 68.62% |
Span: 564bp (45.2%) |
Frame: 1 |
Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit gbM72709 from Homo sapiens. ESTs gb|T42588 and gb... |
Match: gi|195646352|gb|ACG42644.1| |
score: 249 |
e-value: 4e-64 |
Identity: 70.05% |
Span: 561bp (45.0%) |
Frame: 1 |
pre-mRNA-splicing |
Match: gi|52140014|gb|AAU29335.1| |
score: 248 |
e-value: 6e-64 |
Identity: 67.69% |
Span: 561bp (45.0%) |
Frame: 1 |
gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays] |
Match: gi|125601481|gb|EAZ41057.1| |
score: 246 |
e-value: 4e-63 |
Identity: 67.62% |
Span: 561bp (45.0%) |
Frame: 1 |
hypothetical |
Match: gi|68035998|gb|AAY84875.1| |
score: 239 |
e-value: 3e-61 |
Identity: 65.78% |
Span: 561bp (45.0%) |
Frame: 1 |
alternative |
Match: gi|76573323|gb|ABA46766.1| |
score: 238 |
e-value: 1e-60 |
Identity: 66.84% |
Span: 558bp (44.7%) |
Frame: 1 |
pre-mRNA splicing factor-like protein [Solanum tuberosum] |
Match: gi|145332797|ref|NP_001078264.1| |
score: 235 |
e-value: 7e-60 |
Identity: 65.82% |
Span: 561bp (45.0%) |
Frame: 1 |
SRp34a (Ser/Arg-rich protein 34a); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
Match: gi|12324445|gb|AAG52185.1|AC012329_12 |
score: 235 |
e-value: 7e-60 |
Identity: 65.82% |
Span: 561bp (45.0%) |
Frame: 1 |
putative splicing factor; 53460-55514 [Arabidopsis thaliana] |
Match: gi|42565781|ref|NP_190512.3| |
score: 235 |
e-value: 7e-60 |
Identity: 65.82% |
Span: 561bp (45.0%) |
Frame: 1 |
SRp34a (Ser/Arg-rich protein 34a); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi... |
Match: gi|30679138|ref|NP_849537.1| |
score: 234 |
e-value: 2e-59 |
Identity: 74.71% |
Span: 501bp (40.2%) |
Frame: 1 |
gi|30679138|ref|NP_849537.1| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] gi|26451... |
Match: gi|157355203|emb|CAO48579.1| |
score: 234 |
e-value: 1e-59 |
Identity: 69.95% |
Span: 549bp (44.0%) |
Frame: 1 |
unnamed |
Match: gi|3193304|gb|AAC19288.1| |
score: 230 |
e-value: 2e-58 |
Identity: 73.41% |
Span: 498bp (39.9%) |
Frame: 1 |
T14P8.21 |
Match: gi|218200241|gb|EEC82668.1| |
score: 207 |
e-value: 1e-51 |
Identity: 64.06% |
Span: 573bp (46.0%) |
Frame: 1 |
hypothetical protein OsI_27298 [Oryza sativa Indica Group] |
Match: gi|6561944|emb|CAB62448.1| |
score: 207 |
e-value: 2e-51 |
Identity: 65.34% |
Span: 501bp (40.2%) |
Frame: 1 |
PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana] |
Match: gi|125570127|gb|EAZ11642.1| |
score: 205 |
e-value: 6e-51 |
Identity: 64.55% |
Span: 564bp (45.2%) |
Frame: 1 |
hypothetical |
Match: gi|51854465|gb|AAU10844.1| |
score: 199 |
e-value: 4e-49 |
Identity: 68.71% |
Span: 441bp (35.4%) |
Frame: 1 |
gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa (japonica cultivar-group)] |
Match: gi|147788227|emb|CAN71592.1| |
score: 197 |
e-value: 2e-48 |
Identity: 60.71% |
Span: 561bp (45.0%) |
Frame: 1 |
hypothetical protein [Vitis vinifera] |
Match: gi|52140007|gb|AAU29330.1| |
score: 195 |
e-value: 6e-48 |
Identity: 72.79% |
Span: 441bp (35.4%) |
Frame: 1 |
gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays] |
Match: gi|54291866|gb|AAV32234.1| |
score: 189 |
e-value: 4e-46 |
Identity: 69.78% |
Span: 417bp (33.4%) |
Frame: 1 |
gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] |
Match: gi|219446435|ref|XP_002220974.1| |
score: 187 |
e-value: 2e-45 |
Identity: 60.22% |
Span: 540bp (43.3%) |
Frame: 1 |
hypothetical |
Match: gi|219446433|ref|XP_002220973.1| |
score: 186 |
e-value: 3e-45 |
Identity: 54.7% |
Span: 540bp (43.3%) |
Frame: 1 |
hypothetical |
Match: gi|219487511|ref|XP_002240707.1| |
score: 184 |
e-value: 2e-44 |
Identity: 58.58% |
Span: 507bp (40.7%) |
Frame: 1 |
hypothetical |
Match: gi|219487509|ref|XP_002240706.1| |
score: 183 |
e-value: 3e-44 |
Identity: 60.95% |
Span: 507bp (40.7%) |
Frame: 1 |
hypothetical |
Match: gi|193687020|ref|XP_001947357.1| |
score: 180 |
e-value: 3e-43 |
Identity: 52.13% |
Span: 561bp (45.0%) |
Frame: 1 |
PREDICTED: |
Match: gi|91085405|ref|XP_967263.1| |
score: 179 |
e-value: 6e-43 |
Identity: 53.48% |
Span: 558bp (44.7%) |
Frame: 1 |
PREDICTED: |
Match: gi|156545752|ref|XP_001605411.1| |
score: 178 |
e-value: 1e-42 |
Identity: 54.36% |
Span: 567bp (45.5%) |
Frame: 1 |
PREDICTED: |
Match: gi|170588713|ref|XP_001899118.1| |
score: 178 |
e-value: 1e-42 |
Identity: 53.09% |
Span: 561bp (45.0%) |
Frame: 1 |
SF2 |
Match: gi|195996923|ref|XP_002108330.1| |
score: 177 |
e-value: 1e-42 |
Identity: 56.91% |
Span: 540bp (43.3%) |
Frame: 1 |
hypothetical |
Match: gi|66548276|ref|XP_393525.2| |
score: 177 |
e-value: 2e-42 |
Identity: 53.61% |
Span: 555bp (44.5%) |
Frame: 1 |
gi|66548276|ref|XP_393525.2| PREDICTED: similar to GA20008-PA [Apis mellifera] |
Match: gi|215509877|gb|EEC19330.1| |
score: 177 |
e-value: 2e-42 |
Identity: 53.04% |
Span: 540bp (43.3%) |
Frame: 1 |
alternative |
Match: gi|194744791|ref|XP_001954876.1| |
score: 176 |
e-value: 4e-42 |
Identity: 52.13% |
Span: 558bp (44.7%) |
Frame: 1 |
GF16525 |
Match: gi|170591727|ref|XP_001900621.1| |
score: 176 |
e-value: 3e-42 |
Identity: 51.93% |
Span: 540bp (43.3%) |
Frame: 1 |
SF2 |
Match: gi|193687018|ref|XP_001947100.1| |
score: 176 |
e-value: 4e-42 |
Identity: 50.51% |
Span: 561bp (45.0%) |
Frame: 1 |
PREDICTED: |
Match: gi|195038647|ref|XP_001990768.1| |
score: 175 |
e-value: 7e-42 |
Identity: 51.58% |
Span: 558bp (44.7%) |
Frame: 1 |
GH18077 |
Match: gi|195110201|ref|XP_001999670.1| |
score: 175 |
e-value: 7e-42 |
Identity: 51.58% |
Span: 558bp (44.7%) |
Frame: 1 |
GI24651 |
Match: gi|195501014|ref|XP_002097620.1| |
score: 175 |
e-value: 7e-42 |
Identity: 51.58% |
Span: 558bp (44.7%) |
Frame: 1 |
GE26323 |
Match: gi|21358097|ref|NP_652611.1| |
score: 175 |
e-value: 7e-42 |
Identity: 51.58% |
Span: 558bp (44.7%) |
Frame: 1 |
gi|21358097|ref|NP_652611.1| CG6987-PA [Drosophila melanogaster] gi|7243684|gb|AAF43413.1| SR family splicing factor ... |
Match: gi|195152782|ref|XP_002017315.1| |
score: 175 |
e-value: 7e-42 |
Identity: 52.63% |
Span: 558bp (44.7%) |
Frame: 1 |
GL22249 |
Match: gi|56758822|gb|AAW27551.1| |
score: 175 |
e-value: 7e-42 |
Identity: 54.87% |
Span: 561bp (45.0%) |
Frame: 1 |
gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum] |
Match: gi|195388956|ref|XP_002053144.1| |
score: 175 |
e-value: 7e-42 |
Identity: 51.58% |
Span: 558bp (44.7%) |
Frame: 1 |
GJ23504 |
Match: gi|170591729|ref|XP_001900622.1| |
score: 174 |
e-value: 1e-41 |
Identity: 51.89% |
Span: 540bp (43.3%) |
Frame: 1 |
SF2 |
Match: gi|198432543|ref|XP_002131859.1| |
score: 174 |
e-value: 1e-41 |
Identity: 55% |
Span: 537bp (43.1%) |
Frame: 1 |
PREDICTED: |
Match: gi|11527011|gb|AAG36874.1|AF242767_1 |
score: 174 |
e-value: 1e-41 |
Identity: 53.16% |
Span: 540bp (43.3%) |
Frame: 1 |
SF2 |
Match: gi|25150290|ref|NP_499649.2| |
score: 174 |
e-value: 1e-41 |
Identity: 53.16% |
Span: 540bp (43.3%) |
Frame: 1 |
gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
Match: gi|195451089|ref|XP_002072763.1| |
score: 174 |
e-value: 1e-41 |
Identity: 50.78% |
Span: 558bp (44.7%) |
Frame: 1 |
GK13511 |
Match: gi|157113456|ref|XP_001657837.1| |
score: 173 |
e-value: 2e-41 |
Identity: 50.79% |
Span: 555bp (44.5%) |
Frame: 1 |
arginine/serine-rich |
Match: gi|45433540|ref|NP_956887.2| |
score: 173 |
e-value: 2e-41 |
Identity: 52.6% |
Span: 573bp (46.0%) |
Frame: 1 |
gi|45433540|ref|NP_956887.2| hypothetical protein MGC65898 [Danio rerio] >gi|44890669|gb|AAH66682.1| Hypothetical pro... |
Match: gi|82233969|sp|Q5ZML3|SFRS1_CHICK |
score: 173 |
e-value: 3e-41 |
Identity: 52.6% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing |
Match: gi|166091440|ref|NP_001107213.1| |
score: 173 |
e-value: 3e-41 |
Identity: 52.6% |
Span: 573bp (46.0%) |
Frame: 1 |
splicing |
Match: gi|115436242|ref|NP_001042879.1| |
score: 173 |
e-value: 3e-41 |
Identity: 70.5% |
Span: 417bp (33.4%) |
Frame: 1 |
Os01g0316600 |
Match: gi|158293128|ref|XP_314469.4| |
score: 172 |
e-value: 6e-41 |
Identity: 50.56% |
Span: 522bp (41.9%) |
Frame: 1 |
AGAP010496-PA |
Match: gi|34785174|gb|AAH56752.1| |
score: 172 |
e-value: 6e-41 |
Identity: 53.04% |
Span: 543bp (43.5%) |
Frame: 1 |
gi|34785174|gb|AAH56752.1| Unknown (protein for MGC:65898) [Danio rerio] |
Match: gi|47227796|emb|CAG08959.1| |
score: 171 |
e-value: 2e-40 |
Identity: 53.37% |
Span: 534bp (42.8%) |
Frame: 1 |
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis] |
Match: gi|170045710|ref|XP_001850441.1| |
score: 171 |
e-value: 1e-40 |
Identity: 49.74% |
Span: 555bp (44.5%) |
Frame: 1 |
arginine/serine-rich |
Match: gi|63101956|gb|AAH95586.1| |
score: 170 |
e-value: 2e-40 |
Identity: 52.08% |
Span: 573bp (46.0%) |
Frame: 1 |
gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio] |
Match: gi|172046470|emb|CAQ34907.1| |
score: 168 |
e-value: 1e-39 |
Identity: 52.72% |
Span: 540bp (43.3%) |
Frame: 1 |
ASF/SF2 |
Match: gi|156394189|ref|XP_001636709.1| |
score: 168 |
e-value: 8e-40 |
Identity: 50.26% |
Span: 558bp (44.7%) |
Frame: 1 |
predicted |
|
153 lower scoring hits censored -- only 100 best hits are stored. |
arabidopsis/peptide [blastx] | Showing best 9 hits recorded |
Match: At1G02840.3 |
score: 265 |
e-value: 6e-71 |
Identity: 71.13% |
Span: 564bp (45.2%) |
Frame: 1 |
Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
Match: At1G02840.2 |
score: 265 |
e-value: 6e-71 |
Identity: 71.13% |
Span: 564bp (45.2%) |
Frame: 1 |
Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
Match: At1G02840.1 |
score: 265 |
e-value: 6e-71 |
Identity: 71.13% |
Span: 564bp (45.2%) |
Frame: 1 |
Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
Match: At4G02430.2 |
score: 254 |
e-value: 6e-68 |
Identity: 72.82% |
Span: 564bp (45.2%) |
Frame: 1 |
pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1071313 FORWARD |
Match: At1G09140.1 |
score: 252 |
e-value: 3e-67 |
Identity: 68.62% |
Span: 564bp (45.2%) |
Frame: 1 |
Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
Match: At1G09140.2 |
score: 252 |
e-value: 3e-67 |
Identity: 68.62% |
Span: 564bp (45.2%) |
Frame: 1 |
Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
Match: At3G49430.2 |
score: 235 |
e-value: 5e-62 |
Identity: 65.82% |
Span: 561bp (45.0%) |
Frame: 1 |
Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A) | chr3:18343653-18345602 FORWARD |
Match: At3G49430.1 |
score: 235 |
e-value: 5e-62 |
Identity: 65.82% |
Span: 561bp (45.0%) |
Frame: 1 |
Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A); RNA binding | chr3:18343653-18345814 FORWARD |
Match: At4G02430.1 |
score: 234 |
e-value: 1e-61 |
Identity: 74.71% |
Span: 501bp (40.2%) |
Frame: 1 |
pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1070543 FORWARD |
|
swissprot [blastx] | Showing best 27 hits recorded |
Match: O22315 |
score: 265 |
e-value: 5e-70 |
Identity: 71.13% |
Span: 564bp (45.2%) |
Frame: 1 |
Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1 |
Match: Q9NEW6 |
score: 174 |
e-value: 7e-43 |
Identity: 53.16% |
Span: 540bp (43.3%) |
Frame: 1 |
Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2 |
Match: Q6NYA0 |
score: 173 |
e-value: 2e-42 |
Identity: 52.6% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1 OS=Danio rerio GN=sfrs1 |
Match: Q5ZML3 |
score: 173 |
e-value: 2e-42 |
Identity: 52.6% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1 OS=Gallus gallus GN=SFRS1 PE=1 SV=3 |
Match: Q5R7H2 |
score: 168 |
e-value: 7e-41 |
Identity: 51.56% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1 OS=Pongo abelii GN=SFRS1 PE=2 SV=3 |
Match: Q6PDM2 |
score: 168 |
e-value: 7e-41 |
Identity: 51.56% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1 OS=Mus musculus GN=Sfrs1 PE=1 SV=3 |
Match: Q3YLA6 |
score: 168 |
e-value: 7e-41 |
Identity: 51.56% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1 OS=Sus scrofa GN=SFRS1 PE=2 SV=3 |
Match: Q07955 |
score: 168 |
e-value: 7e-41 |
Identity: 51.56% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1 OS=Homo sapiens GN=SFRS1 PE=1 SV=2 |
Match: Q0VCY7 |
score: 168 |
e-value: 7e-41 |
Identity: 51.56% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1 OS=Bos taurus GN=SFRS1 PE=2 SV=1 |
Match: Q7SXP4 |
score: 167 |
e-value: 1e-40 |
Identity: 51.49% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1-like protein 1 OS=Danio rerio GN=sfrs1l |
Match: Q6DII2 |
score: 166 |
e-value: 3e-40 |
Identity: 49.52% |
Span: 573bp (46.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 1 OS=Xenopus tropicalis GN=sfrs1 PE=2 SV=1 |
Match: Q13242 |
score: 157 |
e-value: 1e-37 |
Identity: 55.62% |
Span: 507bp (40.7%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 9 OS=Homo sapiens GN=SFRS9 PE=1 SV=1 |
Match: Q5PPI1 |
score: 157 |
e-value: 2e-37 |
Identity: 55.03% |
Span: 507bp (40.7%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 9 OS=Rattus norvegicus GN=Sfrs9 PE=1 SV=1 |
Match: Q9D0B0 |
score: 157 |
e-value: 9e-38 |
Identity: 55.62% |
Span: 507bp (40.7%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 9 OS=Mus musculus GN=Sfrs9 PE=1 SV=1 |
Match: Q8VE97 |
score: 101 |
e-value: 8e-21 |
Identity: 40.12% |
Span: 498bp (39.9%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 4 OS=Mus musculus GN=Sfrs4 PE=2 SV=1 |
Match: Q08170 |
score: 101 |
e-value: 8e-21 |
Identity: 40.12% |
Span: 498bp (39.9%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 4 OS=Homo sapiens GN=SFRS4 PE=1 SV=2 |
Match: Q13247 |
score: 94.7 |
e-value: 9e-19 |
Identity: 35.84% |
Span: 498bp (39.9%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 6 OS=Homo sapiens GN=SFRS6 PE=1 SV=2 |
Match: Q3B7L6 |
score: 92.8 |
e-value: 4e-18 |
Identity: 35.84% |
Span: 498bp (39.9%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 6 OS=Bos taurus GN=SFRS6 PE=2 SV=1 |
Match: Q09167 |
score: 85.9 |
e-value: 4e-16 |
Identity: 34.91% |
Span: 498bp (39.9%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 5 OS=Rattus norvegicus GN=Sfrs5 PE=2 SV=1 |
Match: Q13243 |
score: 85.9 |
e-value: 4e-16 |
Identity: 34.91% |
Span: 498bp (39.9%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 5 OS=Homo sapiens GN=SFRS5 PE=1 SV=1 |
Match: O35326 |
score: 82.8 |
e-value: 4e-15 |
Identity: 33.94% |
Span: 486bp (39.0%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 5 OS=Mus musculus GN=Sfrs5 PE=1 SV=1 |
Match: P78814 |
score: 79 |
e-value: 5e-14 |
Identity: 32.93% |
Span: 501bp (40.2%) |
Frame: 1 |
Pre-mRNA-splicing factor srp2 OS=Schizosaccharomyces pombe GN=srp2 PE=1 SV=2 |
Match: Q02427 |
score: 70.9 |
e-value: 1e-11 |
Identity: 48.61% |
Span: 216bp (17.3%) |
Frame: 1 |
RNA-binding protein 1 OS=Drosophila melanogaster GN=Rbp1 PE=1 SV=3 |
Match: Q18409 |
score: 70.9 |
e-value: 1e-11 |
Identity: 47.22% |
Span: 216bp (17.3%) |
Frame: 1 |
Probable splicing factor, arginine/serine-rich 6 OS=Caenorhabditis elegans GN=rsp-6 PE=1 SV=1 |
Match: Q8BL97 |
score: 69.7 |
e-value: 3e-11 |
Identity: 50% |
Span: 228bp (18.3%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 7 OS=Mus musculus GN=Sfrs7 PE=1 SV=1 |
Match: Q16629 |
score: 68.9 |
e-value: 6e-11 |
Identity: 51.39% |
Span: 216bp (17.3%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 7 OS=Homo sapiens GN=SFRS7 PE=1 SV=1 |
Match: Q3T106 |
score: 68.9 |
e-value: 6e-11 |
Identity: 51.39% |
Span: 216bp (17.3%) |
Frame: 1 |
Splicing factor, arginine/serine-rich 7 OS=Bos taurus GN=SFRS7 PE=2 SV=1 |
|