| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|147827572|emb|CAN77560.1| |
score: 133 |
e-value: 2e-36 |
Identity: 78.57% |
Span: 252bp (20.1%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157341692|emb|CAO62247.1| |
score: 133 |
e-value: 2e-36 |
Identity: 78.57% |
Span: 252bp (20.1%) |
Frame: 3 |
| unnamed |
| Match: gi|157329645|emb|CAO41080.1| |
score: 127 |
e-value: 3e-27 |
Identity: 84% |
Span: 225bp (17.9%) |
Frame: 3 |
| unnamed |
| Match: gi|116780872|gb|ABK21856.1| |
score: 124 |
e-value: 2e-31 |
Identity: 78.48% |
Span: 234bp (18.7%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|21536704|gb|AAM61036.1| |
score: 123 |
e-value: 6e-32 |
Identity: 73.49% |
Span: 249bp (19.9%) |
Frame: 3 |
| contains similarity to poly(A)-binding protein II [Arabidopsis thaliana] |
| Match: gi|18423239|ref|NP_568751.1| |
score: 123 |
e-value: 6e-32 |
Identity: 73.49% |
Span: 249bp (19.9%) |
Frame: 3 |
| PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding [Arabidopsis thaliana] >gi15... |
| Match: gi|8843848|dbj|BAA97374.1| |
score: 123 |
e-value: 6e-32 |
Identity: 73.49% |
Span: 249bp (19.9%) |
Frame: 3 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|15238390|ref|NP_201329.1| |
score: 122 |
e-value: 7e-30 |
Identity: 81.08% |
Span: 222bp (17.7%) |
Frame: 3 |
| polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] >gi14423494|gb|AAK62429.1|A... |
| Match: gi|168065663|ref|XP_001784768.1| |
score: 121 |
e-value: 5e-28 |
Identity: 71.08% |
Span: 249bp (19.9%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162663676|gb|EDQ50428.1| predicted protein [Physcomitrella... |
| Match: gi|119720774|gb|ABL97957.1| |
score: 119 |
e-value: 2e-29 |
Identity: 78.38% |
Span: 222bp (17.7%) |
Frame: 3 |
| poly(A)-binding protein II-like [Brassica rapa] |
| Match: gi|217074200|gb|ACJ85460.1| |
score: 116 |
e-value: 1e-29 |
Identity: 74.7% |
Span: 249bp (19.9%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|217072312|gb|ACJ84516.1| |
score: 116 |
e-value: 1e-27 |
Identity: 76% |
Span: 225bp (17.9%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|195637520|gb|ACG38228.1| |
score: 115 |
e-value: 2e-27 |
Identity: 70.24% |
Span: 252bp (20.1%) |
Frame: 3 |
| polyadenylate-binding |
| Match: gi|195619834|gb|ACG31747.1| |
score: 115 |
e-value: 2e-27 |
Identity: 70.24% |
Span: 252bp (20.1%) |
Frame: 3 |
| polyadenylate-binding |
| Match: gi|115448789|ref|NP_001048174.1| |
score: 115 |
e-value: 6e-28 |
Identity: 70.24% |
Span: 252bp (20.1%) |
Frame: 3 |
| Os02g0757900 [Oryza sativa (japonica cultivar-group)] >gi46805689|dbj|BAD17090.1| putative poly(A) binding protein [O... |
| Match: gi|46805690|dbj|BAD17091.1| |
score: 115 |
e-value: 4e-29 |
Identity: 70.24% |
Span: 252bp (20.1%) |
Frame: 3 |
| putative poly(A) binding protein [Oryza sativa Japonica Group] >gi125541200|gb|EAY87595.1| hypothetical protein OsI_0... |
| Match: gi|168028169|ref|XP_001766601.1| |
score: 114 |
e-value: 2e-26 |
Identity: 73.97% |
Span: 219bp (17.5%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162682246|gb|EDQ68666.1| predicted protein [Physcomitrella... |
| Match: gi|30683122|ref|NP_850803.1| |
score: 114 |
e-value: 1e-27 |
Identity: 77.33% |
Span: 225bp (17.9%) |
Frame: 3 |
| polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] |
| Match: gi|212722530|ref|NP_001132591.1| |
score: 114 |
e-value: 2e-27 |
Identity: 69.05% |
Span: 252bp (20.1%) |
Frame: 3 |
| hypothetical protein LOC100194063 [Zea mays] >gi194694844|gb|ACF81506.1| unknown [Zea mays] >gi|195635091|gb|ACG37014... |
| Match: gi|15238140|ref|NP_196597.1| |
score: 114 |
e-value: 1e-27 |
Identity: 77.33% |
Span: 225bp (17.9%) |
Frame: 3 |
| polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] >gi7671468|emb|CAB89408.1| ... |
| Match: gi|168066118|ref|XP_001784990.1| |
score: 114 |
e-value: 2e-25 |
Identity: 69.88% |
Span: 249bp (19.9%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162663448|gb|EDQ50211.1| predicted protein [Physcomitrella... |
| Match: gi|167999063|ref|XP_001752237.1| |
score: 113 |
e-value: 1e-26 |
Identity: 77.03% |
Span: 219bp (17.5%) |
Frame: 3 |
| predicted |
| Match: gi|195635741|gb|ACG37339.1| |
score: 108 |
e-value: 3e-25 |
Identity: 76.06% |
Span: 207bp (16.5%) |
Frame: 3 |
| polyadenylate-binding |
| Match: gi|195655291|gb|ACG47113.1| |
score: 108 |
e-value: 5e-25 |
Identity: 81.82% |
Span: 198bp (15.8%) |
Frame: 3 |
| polyadenylate-binding |
| Match: gi|194706900|gb|ACF87534.1| |
score: 108 |
e-value: 5e-25 |
Identity: 81.82% |
Span: 198bp (15.8%) |
Frame: 3 |
| unknown |
| Match: gi|157359923|emb|CAO68659.1| |
score: 107 |
e-value: 2e-26 |
Identity: 67.86% |
Span: 252bp (20.1%) |
Frame: 3 |
| unnamed |
| Match: gi|217072228|gb|ACJ84474.1| |
score: 102 |
e-value: 1e-25 |
Identity: 79.41% |
Span: 204bp (16.3%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|115467128|ref|NP_001057163.1| |
score: 101 |
e-value: 2e-23 |
Identity: 65.88% |
Span: 252bp (20.1%) |
Frame: 3 |
| Os06g0219600 |
| Match: gi|125596514|gb|EAZ36294.1| |
score: 101 |
e-value: 2e-23 |
Identity: 65.88% |
Span: 252bp (20.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|218197814|gb|EEC80241.1| |
score: 101 |
e-value: 2e-19 |
Identity: 65.88% |
Span: 252bp (20.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|159476716|ref|XP_001696457.1| |
score: 80.9 |
e-value: 8e-18 |
Identity: 72.22% |
Span: 162bp (12.9%) |
Frame: 3 |
| poly(A) |
| Match: gi|145348085|ref|XP_001418487.1| |
score: 80.9 |
e-value: 1e-16 |
Identity: 72.22% |
Span: 162bp (12.9%) |
Frame: 3 |
| predicted |
| Match: gi|19112586|ref|NP_595794.1| |
score: 77.8 |
e-value: 4e-15 |
Identity: 58.54% |
Span: 225bp (17.9%) |
Frame: 3 |
| gi|19112586|ref|NP_595794.1| putative poly(a) binding protein [Schizosaccharomyces pombe] gi|7493329|pir||T39586 rna ... |
| Match: gi|46137511|ref|XP_390447.1| |
score: 77.4 |
e-value: 7e-15 |
Identity: 54.12% |
Span: 252bp (20.1%) |
Frame: 3 |
| gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1] >gi|42547126|gb|EAA69969.1| hypoth... |
| Match: gi|169763928|ref|XP_001727864.1| |
score: 77.4 |
e-value: 2e-15 |
Identity: 59.49% |
Span: 234bp (18.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|121702091|ref|XP_001269310.1| |
score: 76.6 |
e-value: 2e-15 |
Identity: 56.96% |
Span: 234bp (18.7%) |
Frame: 3 |
| RNP |
| Match: gi|145612615|ref|XP_367327.2| |
score: 74.3 |
e-value: 9e-14 |
Identity: 66.67% |
Span: 177bp (14.1%) |
Frame: 3 |
| RNP |
| Match: gi|212528088|ref|XP_002144201.1| |
score: 73.9 |
e-value: 3e-14 |
Identity: 60.29% |
Span: 201bp (16.0%) |
Frame: 3 |
| RNP |
| Match: gi|70995100|ref|XP_752316.1| |
score: 73.9 |
e-value: 1e-14 |
Identity: 56.47% |
Span: 252bp (20.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|211585270|emb|CAP92947.1| |
score: 73.9 |
e-value: 3e-14 |
Identity: 64.52% |
Span: 183bp (14.6%) |
Frame: 3 |
| Pc16g02770 |
| Match: gi|119496085|ref|XP_001264816.1| |
score: 73.9 |
e-value: 1e-14 |
Identity: 56.47% |
Span: 252bp (20.1%) |
Frame: 3 |
| RNP |
| Match: gi|210076154|ref|XP_504024.2| |
score: 73.6 |
e-value: 3e-14 |
Identity: 54.43% |
Span: 228bp (18.2%) |
Frame: 3 |
| YALI0E16500p |
| Match: gi|145239151|ref|XP_001392222.1| |
score: 73.2 |
e-value: 4e-14 |
Identity: 60.87% |
Span: 204bp (16.3%) |
Frame: 3 |
| hypothetical |
| Match: gi|218724548|gb|EED23965.1| |
score: 72.8 |
e-value: 7e-14 |
Identity: 65% |
Span: 177bp (14.1%) |
Frame: 3 |
| RNP |
| Match: gi|116201543|ref|XP_001226583.1| |
score: 72.8 |
e-value: 9e-14 |
Identity: 56.94% |
Span: 213bp (17.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|154310272|ref|XP_001554468.1| |
score: 72.8 |
e-value: 4e-14 |
Identity: 57.14% |
Span: 228bp (18.2%) |
Frame: 3 |
| hypothetical |
| Match: gi|119184697|ref|XP_001243223.1| |
score: 72.8 |
e-value: 9e-14 |
Identity: 55.84% |
Span: 228bp (18.2%) |
Frame: 3 |
| hypothetical |
| Match: gi|146413939|ref|XP_001482940.1| |
score: 70.1 |
e-value: 9e-14 |
Identity: 54.67% |
Span: 219bp (17.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|71013016|ref|XP_758548.1| |
score: 70.1 |
e-value: 7e-15 |
Identity: 57.75% |
Span: 198bp (15.8%) |
Frame: 3 |
| gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521] >gi|46098206|gb|EAK83439.1| hypothe... |
| Match: gi|47086087|ref|NP_998424.1| |
score: 67.8 |
e-value: 9e-14 |
Identity: 45.98% |
Span: 213bp (17.0%) |
Frame: 3 |
| gi|47086087|ref|NP_998424.1| zgc:85979 [Danio rerio] >gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio] |
| Match: gi|157311739|ref|NP_001098602.1| |
score: 67.8 |
e-value: 9e-14 |
Identity: 45.98% |
Span: 213bp (17.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|157341692|emb|CAO62247.1| |
score: 43.9 |
e-value: 2e-36 |
Identity: 87.5% |
Span: 72bp (5.7%) |
Frame: 2 |
| unnamed |
| Match: gi|147827572|emb|CAN77560.1| |
score: 43.9 |
e-value: 2e-36 |
Identity: 87.5% |
Span: 72bp (5.7%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|8843848|dbj|BAA97374.1| |
score: 38.9 |
e-value: 6e-32 |
Identity: 62.96% |
Span: 81bp (6.5%) |
Frame: 2 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|21536704|gb|AAM61036.1| |
score: 38.9 |
e-value: 6e-32 |
Identity: 62.96% |
Span: 81bp (6.5%) |
Frame: 2 |
| contains similarity to poly(A)-binding protein II [Arabidopsis thaliana] |
| Match: gi|18423239|ref|NP_568751.1| |
score: 38.9 |
e-value: 6e-32 |
Identity: 62.96% |
Span: 81bp (6.5%) |
Frame: 2 |
| PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding [Arabidopsis thaliana] >gi15... |
| Match: gi|217072228|gb|ACJ84474.1| |
score: 38.1 |
e-value: 1e-25 |
Identity: 73.91% |
Span: 69bp (5.5%) |
Frame: 2 |
| unknown [Medicago truncatula] |
| Match: gi|217074200|gb|ACJ85460.1| |
score: 38.1 |
e-value: 1e-29 |
Identity: 73.91% |
Span: 69bp (5.5%) |
Frame: 2 |
| unknown [Medicago truncatula] |
| Match: gi|46805690|dbj|BAD17091.1| |
score: 37 |
e-value: 4e-29 |
Identity: 56.67% |
Span: 90bp (7.2%) |
Frame: 2 |
| putative poly(A) binding protein [Oryza sativa Japonica Group] >gi125541200|gb|EAY87595.1| hypothetical protein OsI_0... |
| Match: gi|157359923|emb|CAO68659.1| |
score: 36.6 |
e-value: 2e-26 |
Identity: 57.14% |
Span: 84bp (6.7%) |
Frame: 2 |
| unnamed |
| Match: gi|116780872|gb|ABK21856.1| |
score: 35.8 |
e-value: 2e-31 |
Identity: 64.29% |
Span: 81bp (6.5%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|71013016|ref|XP_758548.1| |
score: 34.7 |
e-value: 7e-15 |
Identity: 75% |
Span: 60bp (4.8%) |
Frame: 2 |
| gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521] >gi|46098206|gb|EAK83439.1| hypothe... |
| Match: gi|119720774|gb|ABL97957.1| |
score: 34.7 |
e-value: 2e-29 |
Identity: 62.5% |
Span: 72bp (5.7%) |
Frame: 2 |
| poly(A)-binding protein II-like [Brassica rapa] |
| Match: gi|159476716|ref|XP_001696457.1| |
score: 33.9 |
e-value: 8e-18 |
Identity: 75% |
Span: 60bp (4.8%) |
Frame: 2 |
| poly(A) |
| Match: gi|115448789|ref|NP_001048174.1| |
score: 33.1 |
e-value: 6e-28 |
Identity: 57.69% |
Span: 78bp (6.2%) |
Frame: 2 |
| Os02g0757900 [Oryza sativa (japonica cultivar-group)] >gi46805689|dbj|BAD17090.1| putative poly(A) binding protein [O... |
| Match: gi|212722530|ref|NP_001132591.1| |
score: 33.1 |
e-value: 2e-27 |
Identity: 57.69% |
Span: 78bp (6.2%) |
Frame: 2 |
| hypothetical protein LOC100194063 [Zea mays] >gi194694844|gb|ACF81506.1| unknown [Zea mays] >gi|195635091|gb|ACG37014... |
| Match: gi|15238390|ref|NP_201329.1| |
score: 33.1 |
e-value: 7e-30 |
Identity: 63.64% |
Span: 66bp (5.3%) |
Frame: 2 |
| polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] >gi14423494|gb|AAK62429.1|A... |
| Match: gi|157311739|ref|NP_001098602.1| |
score: 33.1 |
e-value: 9e-14 |
Identity: 53.33% |
Span: 90bp (7.2%) |
Frame: 2 |
| hypothetical |
| Match: gi|47086087|ref|NP_998424.1| |
score: 33.1 |
e-value: 9e-14 |
Identity: 53.33% |
Span: 90bp (7.2%) |
Frame: 2 |
| gi|47086087|ref|NP_998424.1| zgc:85979 [Danio rerio] >gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio] |
| Match: gi|30683122|ref|NP_850803.1| |
score: 32.7 |
e-value: 1e-27 |
Identity: 63.64% |
Span: 66bp (5.3%) |
Frame: 2 |
| polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] |
| Match: gi|15238140|ref|NP_196597.1| |
score: 32.7 |
e-value: 1e-27 |
Identity: 63.64% |
Span: 66bp (5.3%) |
Frame: 2 |
| polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] >gi7671468|emb|CAB89408.1| ... |
| Match: gi|125596514|gb|EAZ36294.1| |
score: 32.3 |
e-value: 2e-23 |
Identity: 53.85% |
Span: 78bp (6.2%) |
Frame: 2 |
| hypothetical |
| Match: gi|115467128|ref|NP_001057163.1| |
score: 32.3 |
e-value: 2e-23 |
Identity: 53.85% |
Span: 78bp (6.2%) |
Frame: 2 |
| Os06g0219600 |
| Match: gi|217072312|gb|ACJ84516.1| |
score: 31.2 |
e-value: 1e-27 |
Identity: 50% |
Span: 72bp (5.7%) |
Frame: 2 |
| unknown [Medicago truncatula] |
| Match: gi|195637520|gb|ACG38228.1| |
score: 31.2 |
e-value: 2e-27 |
Identity: 53.85% |
Span: 78bp (6.2%) |
Frame: 2 |
| polyadenylate-binding |
| Match: gi|195619834|gb|ACG31747.1| |
score: 31.2 |
e-value: 2e-27 |
Identity: 53.85% |
Span: 78bp (6.2%) |
Frame: 2 |
| polyadenylate-binding |
| Match: gi|146413939|ref|XP_001482940.1| |
score: 30.8 |
e-value: 9e-14 |
Identity: 55% |
Span: 60bp (4.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|195635741|gb|ACG37339.1| |
score: 30.8 |
e-value: 3e-25 |
Identity: 51.85% |
Span: 81bp (6.5%) |
Frame: 2 |
| polyadenylate-binding |
| Match: gi|167999063|ref|XP_001752237.1| |
score: 30.8 |
e-value: 1e-26 |
Identity: 54.55% |
Span: 66bp (5.3%) |
Frame: 2 |
| predicted |
| Match: gi|195655291|gb|ACG47113.1| |
score: 30 |
e-value: 5e-25 |
Identity: 50% |
Span: 66bp (5.3%) |
Frame: 2 |
| polyadenylate-binding |
| Match: gi|194706900|gb|ACF87534.1| |
score: 30 |
e-value: 5e-25 |
Identity: 50% |
Span: 66bp (5.3%) |
Frame: 2 |
| unknown |
| Match: gi|121702091|ref|XP_001269310.1| |
score: 29.6 |
e-value: 2e-15 |
Identity: 47.83% |
Span: 69bp (5.5%) |
Frame: 2 |
| RNP |
| Match: gi|145348085|ref|XP_001418487.1| |
score: 29.6 |
e-value: 1e-16 |
Identity: 51.85% |
Span: 81bp (6.5%) |
Frame: 2 |
| predicted |
| Match: gi|119496085|ref|XP_001264816.1| |
score: 29.6 |
e-value: 1e-14 |
Identity: 47.83% |
Span: 69bp (5.5%) |
Frame: 2 |
| RNP |
| Match: gi|70995100|ref|XP_752316.1| |
score: 29.6 |
e-value: 1e-14 |
Identity: 47.83% |
Span: 69bp (5.5%) |
Frame: 2 |
| hypothetical |
| Match: gi|169763928|ref|XP_001727864.1| |
score: 29.3 |
e-value: 2e-15 |
Identity: 64.71% |
Span: 51bp (4.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|168028169|ref|XP_001766601.1| |
score: 29.3 |
e-value: 2e-26 |
Identity: 57.89% |
Span: 57bp (4.5%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162682246|gb|EDQ68666.1| predicted protein [Physcomitrella... |
| Match: gi|154310272|ref|XP_001554468.1| |
score: 29.3 |
e-value: 4e-14 |
Identity: 64.71% |
Span: 51bp (4.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|210076154|ref|XP_504024.2| |
score: 29.3 |
e-value: 3e-14 |
Identity: 64.71% |
Span: 51bp (4.1%) |
Frame: 2 |
| YALI0E16500p |
| Match: gi|211585270|emb|CAP92947.1| |
score: 28.9 |
e-value: 3e-14 |
Identity: 57.89% |
Span: 57bp (4.5%) |
Frame: 2 |
| Pc16g02770 |
| Match: gi|145239151|ref|XP_001392222.1| |
score: 28.9 |
e-value: 4e-14 |
Identity: 58.82% |
Span: 51bp (4.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|212528088|ref|XP_002144201.1| |
score: 28.5 |
e-value: 3e-14 |
Identity: 43.48% |
Span: 69bp (5.5%) |
Frame: 2 |
| RNP |
| Match: gi|218724548|gb|EED23965.1| |
score: 28.5 |
e-value: 7e-14 |
Identity: 43.48% |
Span: 69bp (5.5%) |
Frame: 2 |
| RNP |
| Match: gi|119184697|ref|XP_001243223.1| |
score: 28.1 |
e-value: 9e-14 |
Identity: 58.82% |
Span: 51bp (4.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|116201543|ref|XP_001226583.1| |
score: 28.1 |
e-value: 9e-14 |
Identity: 58.82% |
Span: 51bp (4.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|19112586|ref|NP_595794.1| |
score: 27.7 |
e-value: 4e-15 |
Identity: 47.62% |
Span: 63bp (5.0%) |
Frame: 2 |
| gi|19112586|ref|NP_595794.1| putative poly(a) binding protein [Schizosaccharomyces pombe] gi|7493329|pir||T39586 rna ... |
| Match: gi|168065663|ref|XP_001784768.1| |
score: 27.3 |
e-value: 5e-28 |
Identity: 55.56% |
Span: 54bp (4.3%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162663676|gb|EDQ50428.1| predicted protein [Physcomitrella... |
| Match: gi|46137511|ref|XP_390447.1| |
score: 27.3 |
e-value: 7e-15 |
Identity: 58.82% |
Span: 51bp (4.1%) |
Frame: 2 |
| gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1] >gi|42547126|gb|EAA69969.1| hypoth... |
| Match: gi|168066118|ref|XP_001784990.1| |
score: 26.6 |
e-value: 2e-25 |
Identity: 36.11% |
Span: 108bp (8.6%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162663448|gb|EDQ50211.1| predicted protein [Physcomitrella... |
| Match: gi|145612615|ref|XP_367327.2| |
score: 26.6 |
e-value: 9e-14 |
Identity: 62.5% |
Span: 48bp (3.8%) |
Frame: 2 |
| RNP |
|
| 154 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At5G51120.1 |
score: 123 |
e-value: 5e-34 |
Identity: 73.49% |
Span: 249bp (19.9%) |
Frame: 3 |
| Symbols: PABN1, ATPABN1 | ATPABN1/PABN1 (polyadenylate-binding protein 1); RNA binding | chr5:20796986-20798467 FORWARD |
| Match: At5G65260.1 |
score: 122 |
e-value: 6e-32 |
Identity: 81.08% |
Span: 222bp (17.7%) |
Frame: 3 |
| polyadenylate-binding protein family protein / PABP family protein | chr5:26097727-26100210 REVERSE |
| Match: At5G10350.1 |
score: 114 |
e-value: 1e-29 |
Identity: 77.33% |
Span: 225bp (17.9%) |
Frame: 3 |
| polyadenylate-binding protein family protein / PABP family protein | chr5:3255675-3257747 REVERSE |
| Match: At5G10350.2 |
score: 114 |
e-value: 1e-29 |
Identity: 77.33% |
Span: 225bp (17.9%) |
Frame: 3 |
| polyadenylate-binding protein family protein / PABP family protein | chr5:3255809-3257747 REVERSE |
| Match: At5G51120.1 |
score: 38.9 |
e-value: 5e-34 |
Identity: 62.96% |
Span: 81bp (6.5%) |
Frame: 2 |
| Symbols: PABN1, ATPABN1 | ATPABN1/PABN1 (polyadenylate-binding protein 1); RNA binding | chr5:20796986-20798467 FORWARD |
| Match: At5G65260.1 |
score: 33.1 |
e-value: 6e-32 |
Identity: 63.64% |
Span: 66bp (5.3%) |
Frame: 2 |
| polyadenylate-binding protein family protein / PABP family protein | chr5:26097727-26100210 REVERSE |
| Match: At5G10350.1 |
score: 32.7 |
e-value: 1e-29 |
Identity: 63.64% |
Span: 66bp (5.3%) |
Frame: 2 |
| polyadenylate-binding protein family protein / PABP family protein | chr5:3255675-3257747 REVERSE |
| Match: At5G10350.2 |
score: 32.7 |
e-value: 1e-29 |
Identity: 63.64% |
Span: 66bp (5.3%) |
Frame: 2 |
| polyadenylate-binding protein family protein / PABP family protein | chr5:3255809-3257747 REVERSE |
|
| swissprot [blastx] | Showing best 24 hits recorded |
| Match: O14327 |
score: 77.8 |
e-value: 3e-16 |
Identity: 58.54% |
Span: 225bp (17.9%) |
Frame: 3 |
| Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe GN=pab2 PE=2 SV=1 |
| Match: Q6TY21 |
score: 64.7 |
e-value: 3e-13 |
Identity: 47.5% |
Span: 210bp (16.7%) |
Frame: 3 |
| Embryonic polyadenylate-binding protein 2-B OS=Xenopus laevis GN=epabp2-B PE=1 SV=1 |
| Match: Q804A5 |
score: 64.7 |
e-value: 3e-13 |
Identity: 47.5% |
Span: 210bp (16.7%) |
Frame: 3 |
| Embryonic polyadenylate-binding protein 2-A OS=Xenopus laevis GN=epabp2-A PE=1 SV=1 |
| Match: Q9DDY9 |
score: 63.9 |
e-value: 3e-13 |
Identity: 44.19% |
Span: 210bp (16.7%) |
Frame: 3 |
| Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-A PE=2 SV=1 |
| Match: Q7ZXB8 |
score: 63.9 |
e-value: 3e-13 |
Identity: 44.19% |
Span: 210bp (16.7%) |
Frame: 3 |
| Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-B PE=2 SV=1 |
| Match: Q6NVP7 |
score: 63.5 |
e-value: 6e-13 |
Identity: 44.19% |
Span: 210bp (16.7%) |
Frame: 3 |
| Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1 |
| Match: Q28165 |
score: 62.8 |
e-value: 1e-12 |
Identity: 52.11% |
Span: 210bp (16.7%) |
Frame: 3 |
| Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3 |
| Match: Q86U42 |
score: 62.8 |
e-value: 1e-12 |
Identity: 52.11% |
Span: 210bp (16.7%) |
Frame: 3 |
| Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3 |
| Match: Q8CCS6 |
score: 62.4 |
e-value: 1e-12 |
Identity: 57.41% |
Span: 159bp (12.7%) |
Frame: 3 |
| Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=2 SV=3 |
| Match: Q7KNF2 |
score: 62 |
e-value: 2e-12 |
Identity: 50% |
Span: 177bp (14.1%) |
Frame: 3 |
| Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2 PE=1 SV=1 |
| Match: Q28ZX3 |
score: 62 |
e-value: 2e-12 |
Identity: 50% |
Span: 177bp (14.1%) |
Frame: 3 |
| Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura pseudoobscura GN=Pabp2 PE=3 SV=1 |
| Match: Q54ZS8 |
score: 57 |
e-value: 8e-11 |
Identity: 51.92% |
Span: 153bp (12.2%) |
Frame: 3 |
| Polyadenylate-binding protein 2 OS=Dictyostelium discoideum GN=pabpn1 PE=3 SV=1 |
| Match: Q7ZXB8 |
score: 31.2 |
e-value: 3e-13 |
Identity: 53.12% |
Span: 90bp (7.2%) |
Frame: 2 |
| Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-B PE=2 SV=1 |
| Match: Q9DDY9 |
score: 31.2 |
e-value: 3e-13 |
Identity: 53.12% |
Span: 90bp (7.2%) |
Frame: 2 |
| Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-A PE=2 SV=1 |
| Match: Q7KNF2 |
score: 30.8 |
e-value: 2e-12 |
Identity: 50% |
Span: 72bp (5.7%) |
Frame: 2 |
| Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2 PE=1 SV=1 |
| Match: Q8CCS6 |
score: 30.8 |
e-value: 1e-12 |
Identity: 53.12% |
Span: 90bp (7.2%) |
Frame: 2 |
| Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=2 SV=3 |
| Match: Q28165 |
score: 30.8 |
e-value: 1e-12 |
Identity: 53.12% |
Span: 90bp (7.2%) |
Frame: 2 |
| Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3 |
| Match: Q6TY21 |
score: 30.8 |
e-value: 3e-13 |
Identity: 44.44% |
Span: 81bp (6.5%) |
Frame: 2 |
| Embryonic polyadenylate-binding protein 2-B OS=Xenopus laevis GN=epabp2-B PE=1 SV=1 |
| Match: Q804A5 |
score: 30.8 |
e-value: 3e-13 |
Identity: 44.44% |
Span: 81bp (6.5%) |
Frame: 2 |
| Embryonic polyadenylate-binding protein 2-A OS=Xenopus laevis GN=epabp2-A PE=1 SV=1 |
| Match: Q86U42 |
score: 30.8 |
e-value: 1e-12 |
Identity: 53.12% |
Span: 90bp (7.2%) |
Frame: 2 |
| Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3 |
| Match: Q6NVP7 |
score: 30.8 |
e-value: 6e-13 |
Identity: 53.12% |
Span: 90bp (7.2%) |
Frame: 2 |
| Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1 |
| Match: Q28ZX3 |
score: 30.4 |
e-value: 2e-12 |
Identity: 64.71% |
Span: 51bp (4.1%) |
Frame: 2 |
| Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura pseudoobscura GN=Pabp2 PE=3 SV=1 |
| Match: Q54ZS8 |
score: 30 |
e-value: 8e-11 |
Identity: 64.71% |
Span: 51bp (4.1%) |
Frame: 2 |
| Polyadenylate-binding protein 2 OS=Dictyostelium discoideum GN=pabpn1 PE=3 SV=1 |
| Match: O14327 |
score: 27.7 |
e-value: 3e-16 |
Identity: 47.62% |
Span: 63bp (5.0%) |
Frame: 2 |
| Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe GN=pab2 PE=2 SV=1 |
|